RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 ATP1B4Q9UN42 357 aaPredicted RBP9.71□□□□□ -0.86
PTEN-204ENST00000487939 FMNL1O95466 1100 aaPredicted RBP9.7□□□□□ -0.86
PTEN-204ENST00000487939 LAPTM4AQ15012 233 aa9.7□□□□□ -0.86
PTEN-204ENST00000487939 HLA-CQ95604 372 aa9.7□□□□□ -0.86
PTEN-204ENST00000487939 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
PTEN-204ENST00000487939 LIMD1Q9UGP4 676 aa9.69□□□□□ -0.86
PTEN-204ENST00000487939 LCE2BO14633 110 aa9.68□□□□□ -0.86
PTEN-204ENST00000487939 PRPF38BQ5VTL8 546 aaKnown RBP9.68□□□□□ -0.86
PTEN-204ENST00000487939 SPDYE5A6NIY4 337 aa9.67□□□□□ -0.86
PTEN-204ENST00000487939 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
PTEN-204ENST00000487939 BRICD5Q6PL45 260 aa9.67□□□□□ -0.86
PTEN-204ENST00000487939 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
PTEN-204ENST00000487939 ZBTB3Q9H5J0 574 aa9.67□□□□□ -0.86
PTEN-204ENST00000487939 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
PTEN-204ENST00000487939 ADH1BP00325 375 aa9.66□□□□□ -0.86
PTEN-204ENST00000487939 MTMR2Q13614 643 aa9.66□□□□□ -0.86
PTEN-204ENST00000487939 THAP11Q96EK4 314 aa9.66□□□□□ -0.86
PTEN-204ENST00000487939 SPSB2Q99619 263 aa9.66□□□□□ -0.86
PTEN-204ENST00000487939 CSPP1Q1MSJ5 1256 aa9.65□□□□□ -0.86
PTEN-204ENST00000487939 RETREG3Q86VR2 466 aa9.65□□□□□ -0.86
PTEN-204ENST00000487939 PCDHB15Q9Y5E8 787 aa9.65□□□□□ -0.86
PTEN-204ENST00000487939 NUTM2BA6NNL0 878 aaPredicted RBP9.64□□□□□ -0.87
PTEN-204ENST00000487939 NUTM2EB1AL46 878 aaPredicted RBP9.64□□□□□ -0.87
PTEN-204ENST00000487939 NUTM2DQ5VT03 806 aaPredicted RBP9.64□□□□□ -0.87
PTEN-204ENST00000487939 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
PTEN-204ENST00000487939 NUTM2AQ8IVF1 878 aaPredicted RBP9.64□□□□□ -0.87
PTEN-204ENST00000487939 PROCA1Q8NCQ7 364 aaPredicted RBP9.64□□□□□ -0.87
PTEN-204ENST00000487939 USB1Q9BQ65 265 aaKnown RBP9.64□□□□□ -0.87
PTEN-204ENST00000487939 TLL1O43897 1013 aa9.63□□□□□ -0.87
PTEN-204ENST00000487939 LILRB3O75022 631 aa9.63□□□□□ -0.87
PTEN-204ENST00000487939 HRCP23327 699 aa9.63□□□□□ -0.87
PTEN-204ENST00000487939 TRAF7Q6Q0C0 670 aa9.63□□□□□ -0.87
PTEN-204ENST00000487939 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTEN-204ENST00000487939 MSS51Q4VC12 460 aa9.62□□□□□ -0.87
PTEN-204ENST00000487939 GGCXP38435 758 aa9.61□□□□□ -0.87
PTEN-204ENST00000487939 QPCTQ16769 361 aa9.61□□□□□ -0.87
PTEN-204ENST00000487939 CABLES1Q8TDN4 633 aa9.61□□□□□ -0.87
PTEN-204ENST00000487939 SYMPKQ92797 1274 aaKnown RBP9.61□□□□□ -0.87
PTEN-204ENST00000487939 SLC6A16Q9GZN6 736 aa9.61□□□□□ -0.87
PTEN-204ENST00000487939 GFRA3O60609 400 aa9.6□□□□□ -0.87
PTEN-204ENST00000487939 PPP2R2DQ66LE6 453 aa9.6□□□□□ -0.87
PTEN-204ENST00000487939 NKX2-3Q8TAU0 364 aa9.6□□□□□ -0.87
PTEN-204ENST00000487939 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
PTEN-204ENST00000487939 FAM160A2Q8N612 972 aaPredicted RBP9.58□□□□□ -0.88
PTEN-204ENST00000487939 DESI1Q6ICB0 168 aa9.57□□□□□ -0.88
PTEN-204ENST00000487939 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
PTEN-204ENST00000487939 S1PR4O95977 384 aa9.56□□□□□ -0.88
PTEN-204ENST00000487939 JUNDP17535 347 aa9.56□□□□□ -0.88
PTEN-204ENST00000487939 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
PTEN-204ENST00000487939 CFAP99D6REC4 459 aa9.55□□□□□ -0.88
PTEN-204ENST00000487939 MMP16P51512 607 aa9.55□□□□□ -0.88
PTEN-204ENST00000487939 NRG2O14511 850 aaPredicted RBP9.54□□□□□ -0.88
PTEN-204ENST00000487939 DXOO77932 396 aaKnown RBP9.54□□□□□ -0.88
PTEN-204ENST00000487939 RFC5P40937 340 aa9.54□□□□□ -0.88
PTEN-204ENST00000487939 TMEM259Q4ZIN3 620 aa9.54□□□□□ -0.88
PTEN-204ENST00000487939 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.54□□□□□ -0.88
PTEN-204ENST00000487939 TSC1Q92574 1164 aa9.53□□□□□ -0.88
PTEN-204ENST00000487939 PRDM9Q9NQV7 894 aa9.53□□□□□ -0.88
PTEN-204ENST00000487939 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
PTEN-204ENST00000487939 PRKD2Q9BZL6 878 aa9.52□□□□□ -0.89
PTEN-204ENST00000487939 AP1G2O75843 785 aa9.51□□□□□ -0.89
PTEN-204ENST00000487939 PTPRNQ16849 979 aa9.51□□□□□ -0.89
PTEN-204ENST00000487939 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
PTEN-204ENST00000487939 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
PTEN-204ENST00000487939 LYPD8Q6UX82 237 aa9.5□□□□□ -0.89
PTEN-204ENST00000487939 ANKLE1Q8NAG6 615 aa9.5□□□□□ -0.89
PTEN-204ENST00000487939 BANK1Q8NDB2 785 aa9.49□□□□□ -0.89
PTEN-204ENST00000487939 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
PTEN-204ENST00000487939 CCNYL3P0C7X3 344 aa9.48□□□□□ -0.89
PTEN-204ENST00000487939 NUDT12Q9BQG2 462 aa9.48□□□□□ -0.89
PTEN-204ENST00000487939 FCF1Q9Y324 198 aaKnown RBP9.48□□□□□ -0.89
PTEN-204ENST00000487939 PPEF1O14829 653 aaPredicted RBP9.46□□□□□ -0.9
PTEN-204ENST00000487939 USP17L8P0C7I0 530 aa9.46□□□□□ -0.9
PTEN-204ENST00000487939 CTDSPL2Q05D32 466 aa9.46□□□□□ -0.9
PTEN-204ENST00000487939 CCDC24Q8N4L8 307 aa9.46□□□□□ -0.9
PTEN-204ENST00000487939 APBB1O00213 710 aa9.44□□□□□ -0.9
PTEN-204ENST00000487939 EVA1BQ9NVM1 165 aa9.44□□□□□ -0.9
PTEN-204ENST00000487939 PER1O15534 1290 aaPredicted RBP9.43□□□□□ -0.9
PTEN-204ENST00000487939 ZBTB24O43167 697 aaPredicted RBP9.43□□□□□ -0.9
PTEN-204ENST00000487939 KCNH2Q12809 1159 aa9.43□□□□□ -0.9
PTEN-204ENST00000487939 ZNF787Q6DD87 383 aa9.43□□□□□ -0.9
PTEN-204ENST00000487939 SOCS7O14512 581 aa9.42□□□□□ -0.9
PTEN-204ENST00000487939 CTHP32929 405 aa9.42□□□□□ -0.9
PTEN-204ENST00000487939 F12P00748 615 aaPredicted RBP9.41□□□□□ -0.9
PTEN-204ENST00000487939 LRRN4Q8WUT4 740 aa9.41□□□□□ -0.9
PTEN-204ENST00000487939 RPIAP49247 311 aa9.4□□□□□ -0.9
PTEN-204ENST00000487939 FLIIQ13045 1269 aa9.4□□□□□ -0.9
PTEN-204ENST00000487939 PNMA1Q8ND90 353 aa9.4□□□□□ -0.9
PTEN-204ENST00000487939 ARMC2Q8NEN0 867 aa9.39□□□□□ -0.91
PTEN-204ENST00000487939 MAP10Q9P2G4 905 aa9.39□□□□□ -0.91
PTEN-204ENST00000487939 SLC19A1P41440 591 aa9.38□□□□□ -0.91
PTEN-204ENST00000487939 PLA2G2CQ5R387 149 aa9.38□□□□□ -0.91
PTEN-204ENST00000487939 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
PTEN-204ENST00000487939 PDZRN3Q9UPQ7 1066 aa9.38□□□□□ -0.91
PTEN-204ENST00000487939 CD2BP2O95400 341 aaKnown RBP9.37□□□□□ -0.91
PTEN-204ENST00000487939 UNC93B1Q9H1C4 597 aa9.37□□□□□ -0.91
PTEN-204ENST00000487939 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
PTEN-204ENST00000487939 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
PTEN-204ENST00000487939 GTF3C3Q9Y5Q9 886 aa9.37□□□□□ -0.91
PTEN-204ENST00000487939 MCM6Q14566 821 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms