RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 RBM5P52756 815 aaKnown RBP eCLIP18.53■□□□□ 0.56
PKD1-220ENST00000487932 OLFM4Q6UX06 510 aa18.53■□□□□ 0.56
PKD1-220ENST00000487932 E9PSI1 815 aa18.53■□□□□ 0.56
PKD1-220ENST00000487932 KRT18P05783 430 aaKnown RBP18.53■□□□□ 0.56
PKD1-220ENST00000487932 SKOR2Q2VWA4 1001 aaPredicted RBP18.53■□□□□ 0.56
PKD1-220ENST00000487932 EXOC6Q8TAG9 804 aa18.52■□□□□ 0.56
PKD1-220ENST00000487932 TEX35Q5T0J7 233 aa18.52■□□□□ 0.56
PKD1-220ENST00000487932 MYBBP1AQ9BQG0 1328 aaKnown RBP18.52■□□□□ 0.56
PKD1-220ENST00000487932 IFT57Q9NWB7 429 aa18.52■□□□□ 0.56
PKD1-220ENST00000487932 CCDC173Q0VFZ6 552 aa18.52■□□□□ 0.55
PKD1-220ENST00000487932 XBP1P17861 261 aa18.51■□□□□ 0.55
PKD1-220ENST00000487932 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
PKD1-220ENST00000487932 PDE3BQ13370 1112 aa18.51■□□□□ 0.55
PKD1-220ENST00000487932 MNS1Q8NEH6 495 aa18.51■□□□□ 0.55
PKD1-220ENST00000487932 ERC2O15083 957 aa18.51■□□□□ 0.55
PKD1-220ENST00000487932 KIF6Q6ZMV9 814 aa18.5■□□□□ 0.55
PKD1-220ENST00000487932 SYCP1Q15431 976 aa18.5■□□□□ 0.55
PKD1-220ENST00000487932 CCDC144AA2RUR9 1427 aa18.5■□□□□ 0.55
PKD1-220ENST00000487932 PPM1FP49593 454 aaPredicted RBP18.49■□□□□ 0.55
PKD1-220ENST00000487932 MAP7D2Q96T17 732 aa18.49■□□□□ 0.55
PKD1-220ENST00000487932 ZHX3Q9H4I2 956 aa18.49■□□□□ 0.55
PKD1-220ENST00000487932 ANKRD62A6NC57 917 aa18.48■□□□□ 0.55
PKD1-220ENST00000487932 PHLDB1Q86UU1 1377 aa18.48■□□□□ 0.55
PKD1-220ENST00000487932 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
PKD1-220ENST00000487932 RDXP35241 583 aaKnown RBP18.48■□□□□ 0.55
PKD1-220ENST00000487932 TBC1D2BQ9UPU7 963 aa18.48■□□□□ 0.55
PKD1-220ENST00000487932 NEFHP12036 1026 aa18.47■□□□□ 0.55
PKD1-220ENST00000487932 CCDC97Q96F63 343 aaPredicted RBP18.47■□□□□ 0.55
PKD1-220ENST00000487932 API5Q9BZZ5 524 aaKnown RBP18.47■□□□□ 0.55
PKD1-220ENST00000487932 PDE4AP27815 886 aa18.47■□□□□ 0.55
PKD1-220ENST00000487932 FSD1Q9BTV5 496 aa18.47■□□□□ 0.55
PKD1-220ENST00000487932 WASHC2AQ641Q2 1341 aa18.46■□□□□ 0.55
PKD1-220ENST00000487932 DZIP1LQ8IYY4 767 aaKnown RBP18.46■□□□□ 0.55
PKD1-220ENST00000487932 FAM13BQ9NYF5 915 aa18.46■□□□□ 0.55
PKD1-220ENST00000487932 FMN1Q68DA7 1419 aa18.46■□□□□ 0.55
PKD1-220ENST00000487932 LNPKQ9C0E8 428 aa18.46■□□□□ 0.55
PKD1-220ENST00000487932 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
PKD1-220ENST00000487932 PDCL3Q9H2J4 239 aa18.46■□□□□ 0.55
PKD1-220ENST00000487932 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
PKD1-220ENST00000487932 PIP4K2BP78356 416 aa18.45■□□□□ 0.54
PKD1-220ENST00000487932 UBTFL1P0CB47 393 aaPredicted RBP18.45■□□□□ 0.54
PKD1-220ENST00000487932 CNNM1Q9NRU3 951 aa18.45■□□□□ 0.54
PKD1-220ENST00000487932 UACAQ9BZF9 1416 aa18.45■□□□□ 0.54
PKD1-220ENST00000487932 CHMP4BP1P59074 171 aa18.44■□□□□ 0.54
PKD1-220ENST00000487932 SART3Q15020 963 aaKnown RBP18.44■□□□□ 0.54
PKD1-220ENST00000487932 ESCO1Q5FWF5 840 aa18.44■□□□□ 0.54
PKD1-220ENST00000487932 SDF4Q9BRK5 362 aa18.44■□□□□ 0.54
PKD1-220ENST00000487932 ROCK1Q13464 1354 aa18.44■□□□□ 0.54
PKD1-220ENST00000487932 PLCD4Q9BRC7 762 aa18.44■□□□□ 0.54
PKD1-220ENST00000487932 FAM69CQ0P6D2 419 aa18.43■□□□□ 0.54
PKD1-220ENST00000487932 HSP90AB4PQ58FF6 505 aa18.43■□□□□ 0.54
PKD1-220ENST00000487932 TTC39AQ5SRH9 613 aa18.43■□□□□ 0.54
PKD1-220ENST00000487932 DHX37Q8IY37 1157 aaKnown RBP18.43■□□□□ 0.54
PKD1-220ENST00000487932 MAGEC2Q9UBF1 373 aaPredicted RBP18.43■□□□□ 0.54
PKD1-220ENST00000487932 SLC3A2P08195 630 aaKnown RBP18.43■□□□□ 0.54
PKD1-220ENST00000487932 MATR3P43243 847 aaKnown RBP eCLIP18.43■□□□□ 0.54
PKD1-220ENST00000487932 MPHOSPH10O00566 681 aaKnown RBP18.43■□□□□ 0.54
PKD1-220ENST00000487932 CEBPZQ03701 1054 aaKnown RBP18.43■□□□□ 0.54
PKD1-220ENST00000487932 FMNL2Q96PY5 1086 aa18.43■□□□□ 0.54
PKD1-220ENST00000487932 NLRP6P59044 892 aa18.42■□□□□ 0.54
PKD1-220ENST00000487932 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
PKD1-220ENST00000487932 RRP1P56182 461 aaKnown RBP18.42■□□□□ 0.54
PKD1-220ENST00000487932 SMC2O95347 1197 aa18.41■□□□□ 0.54
PKD1-220ENST00000487932 HSP90B2PQ58FF3 399 aa18.41■□□□□ 0.54
PKD1-220ENST00000487932 JPH4Q96JJ6 628 aa18.41■□□□□ 0.54
PKD1-220ENST00000487932 ACBD3Q9H3P7 528 aa18.41■□□□□ 0.54
PKD1-220ENST00000487932 RSPH4AQ5TD94 716 aa18.41■□□□□ 0.54
PKD1-220ENST00000487932 DDX54Q8TDD1 881 aaKnown RBP18.41■□□□□ 0.54
PKD1-220ENST00000487932 GGNBP2Q9H3C7 697 aa18.4■□□□□ 0.54
PKD1-220ENST00000487932 ZSCAN29Q8IWY8 852 aaPredicted RBP18.4■□□□□ 0.54
PKD1-220ENST00000487932 ABTB2Q8N961 1025 aa18.4■□□□□ 0.54
PKD1-220ENST00000487932 CABP2Q9NPB3 220 aa18.4■□□□□ 0.54
PKD1-220ENST00000487932 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.54
PKD1-220ENST00000487932 NAT10Q9H0A0 1025 aaKnown RBP18.39■□□□□ 0.53
PKD1-220ENST00000487932 ARGLU1Q9NWB6 273 aaPredicted RBP18.39■□□□□ 0.53
PKD1-220ENST00000487932 MYO6Q9UM54 1294 aa18.39■□□□□ 0.53
PKD1-220ENST00000487932 CNTROBQ8N137 903 aa18.39■□□□□ 0.53
PKD1-220ENST00000487932 NINLQ9Y2I6 1382 aa18.39■□□□□ 0.53
PKD1-220ENST00000487932 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
PKD1-220ENST00000487932 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
PKD1-220ENST00000487932 NEBLO76041 1014 aa18.38■□□□□ 0.53
PKD1-220ENST00000487932 GSE1Q14687 1217 aa18.37■□□□□ 0.53
PKD1-220ENST00000487932 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
PKD1-220ENST00000487932 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
PKD1-220ENST00000487932 PAXIP1Q6ZW49 1069 aaPredicted RBP18.37■□□□□ 0.53
PKD1-220ENST00000487932 TXLNAP40222 546 aa18.37■□□□□ 0.53
PKD1-220ENST00000487932 SEPT11Q9NVA2 429 aaKnown RBP18.37■□□□□ 0.53
PKD1-220ENST00000487932 GNAI1P63096 354 aa18.36■□□□□ 0.53
PKD1-220ENST00000487932 CCDC191Q8NCU4 936 aa18.36■□□□□ 0.53
PKD1-220ENST00000487932 H0YHG0 523 aa18.36■□□□□ 0.53
PKD1-220ENST00000487932 DCTN1Q14203 1278 aa18.36■□□□□ 0.53
PKD1-220ENST00000487932 PSMA5P28066 241 aa18.36■□□□□ 0.53
PKD1-220ENST00000487932 BICDL1Q6ZP65 573 aa18.36■□□□□ 0.53
PKD1-220ENST00000487932 SEPT7Q16181 437 aaKnown RBP18.36■□□□□ 0.53
PKD1-220ENST00000487932 RNF214Q8ND24 703 aa18.36■□□□□ 0.53
PKD1-220ENST00000487932 SURF6O75683 361 aaKnown RBP18.35■□□□□ 0.53
PKD1-220ENST00000487932 PIBF1Q8WXW3 757 aa18.35■□□□□ 0.53
PKD1-220ENST00000487932 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
PKD1-220ENST00000487932 SIL1Q9H173 461 aa18.34■□□□□ 0.53
PKD1-220ENST00000487932 GNL3LQ9NVN8 582 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms