RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 FMNL1O95466 1100 aaPredicted RBP9.44□□□□□ -0.9
USP9X-208ENST00000487625 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
USP9X-208ENST00000487625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.43□□□□□ -0.9
USP9X-208ENST00000487625 VSIG8P0DPA2 414 aa9.42□□□□□ -0.9
USP9X-208ENST00000487625 SLC27A5Q9Y2P5 690 aa9.42□□□□□ -0.9
USP9X-208ENST00000487625 MSS51Q4VC12 460 aa9.41□□□□□ -0.9
USP9X-208ENST00000487625 FUT2Q10981 343 aa9.4□□□□□ -0.9
USP9X-208ENST00000487625 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
USP9X-208ENST00000487625 SKOR1P84550 965 aa9.38□□□□□ -0.91
USP9X-208ENST00000487625 RC3H1Q5TC82 1133 aaKnown RBP9.38□□□□□ -0.91
USP9X-208ENST00000487625 SALL2Q9Y467 1007 aaPredicted RBP9.38□□□□□ -0.91
USP9X-208ENST00000487625 FECHP22830 423 aa9.37□□□□□ -0.91
USP9X-208ENST00000487625 ALDH1A1P00352 501 aa9.36□□□□□ -0.91
USP9X-208ENST00000487625 RNF19BQ6ZMZ0 732 aa9.36□□□□□ -0.91
USP9X-208ENST00000487625 CAPN5O15484 640 aaPredicted RBP9.35□□□□□ -0.91
USP9X-208ENST00000487625 ATP6V1AP38606 617 aa9.35□□□□□ -0.91
USP9X-208ENST00000487625 RSPH4AQ5TD94 716 aa9.35□□□□□ -0.91
USP9X-208ENST00000487625 PXYLP1Q8TE99 480 aa9.35□□□□□ -0.91
USP9X-208ENST00000487625 ZFP42Q96MM3 310 aa9.35□□□□□ -0.91
USP9X-208ENST00000487625 MMP16P51512 607 aa9.33□□□□□ -0.92
USP9X-208ENST00000487625 GPAT2Q6NUI2 795 aa9.33□□□□□ -0.92
USP9X-208ENST00000487625 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.32□□□□□ -0.92
USP9X-208ENST00000487625 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
USP9X-208ENST00000487625 RNF225M0QZC1 329 aaPredicted RBP9.31□□□□□ -0.92
USP9X-208ENST00000487625 WNT7BP56706 349 aa9.3□□□□□ -0.92
USP9X-208ENST00000487625 RDH13Q8NBN7 331 aa9.29□□□□□ -0.92
USP9X-208ENST00000487625 KRTAP9-2Q9BYQ4 174 aa9.29□□□□□ -0.92
USP9X-208ENST00000487625 ADAMTS8Q9UP79 889 aa9.29□□□□□ -0.92
USP9X-208ENST00000487625 SOBPA7XYQ1 873 aa9.28□□□□□ -0.92
USP9X-208ENST00000487625 SIAH2O43255 324 aa9.28□□□□□ -0.92
USP9X-208ENST00000487625 IGHA1P01876 353 aa9.27□□□□□ -0.93
USP9X-208ENST00000487625 DNMT3AQ9Y6K1 912 aaPredicted RBP9.27□□□□□ -0.93
USP9X-208ENST00000487625 DCAF8L2P0C7V8 631 aa9.26□□□□□ -0.93
USP9X-208ENST00000487625 KRTAP9-6A0A140TA67 174 aa9.25□□□□□ -0.93
USP9X-208ENST00000487625 DXOO77932 396 aaKnown RBP9.25□□□□□ -0.93
USP9X-208ENST00000487625 OATP04181 439 aa9.25□□□□□ -0.93
USP9X-208ENST00000487625 METTL3Q86U44 580 aaKnown RBP9.25□□□□□ -0.93
USP9X-208ENST00000487625 GCGRP47871 477 aa9.24□□□□□ -0.93
USP9X-208ENST00000487625 KRT76Q01546 638 aa9.23□□□□□ -0.93
USP9X-208ENST00000487625 WDR70Q9NW82 654 aa9.23□□□□□ -0.93
USP9X-208ENST00000487625 WASF2Q9Y6W5 498 aa9.23□□□□□ -0.93
USP9X-208ENST00000487625 NUTM2FA1L443 756 aa9.21□□□□□ -0.94
USP9X-208ENST00000487625 DDX11L8A8MPP1 907 aa9.21□□□□□ -0.94
USP9X-208ENST00000487625 MRPL14Q6P1L8 145 aaKnown RBP9.21□□□□□ -0.94
USP9X-208ENST00000487625 CCDC24Q8N4L8 307 aa9.21□□□□□ -0.94
USP9X-208ENST00000487625 DAXXQ9UER7 740 aaPredicted RBP9.21□□□□□ -0.94
USP9X-208ENST00000487625 PURBQ96QR8 312 aaKnown RBP9.2□□□□□ -0.94
USP9X-208ENST00000487625 PSMG3-AS1Q96PY0 264 aa9.19□□□□□ -0.94
USP9X-208ENST00000487625 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
USP9X-208ENST00000487625 FCHSD2O94868 740 aa9.18□□□□□ -0.94
USP9X-208ENST00000487625 IRS1P35568 1242 aa9.18□□□□□ -0.94
USP9X-208ENST00000487625 EHBP1Q8NDI1 1231 aa9.18□□□□□ -0.94
USP9X-208ENST00000487625 ADAM23O75077 832 aa9.17□□□□□ -0.94
USP9X-208ENST00000487625 FOXK2Q01167 660 aa9.17□□□□□ -0.94
USP9X-208ENST00000487625 Q3C1V9 767 aa9.16□□□□□ -0.94
USP9X-208ENST00000487625 USB1Q9BQ65 265 aaKnown RBP9.16□□□□□ -0.94
USP9X-208ENST00000487625 SCARF1Q14162 830 aa9.15□□□□□ -0.94
USP9X-208ENST00000487625 ZNF385CQ66K41 422 aaPredicted RBP9.15□□□□□ -0.94
USP9X-208ENST00000487625 NLRP7Q8WX94 980 aa9.15□□□□□ -0.94
USP9X-208ENST00000487625 KRTAP1-3Q8IUG1 177 aa9.14□□□□□ -0.95
USP9X-208ENST00000487625 GPR161Q8N6U8 529 aaKnown RBP9.14□□□□□ -0.95
USP9X-208ENST00000487625 CNTNAP3BQ96NU0 1288 aa9.14□□□□□ -0.95
USP9X-208ENST00000487625 CNTNAP3Q9BZ76 1288 aa9.14□□□□□ -0.95
USP9X-208ENST00000487625 GRIPAP1Q4V328 841 aa9.12□□□□□ -0.95
USP9X-208ENST00000487625 TIMP2P16035 220 aa9.11□□□□□ -0.95
USP9X-208ENST00000487625 TLL2Q9Y6L7 1015 aa9.11□□□□□ -0.95
USP9X-208ENST00000487625 PTCRAQ6ISU1 281 aaPredicted RBP9.1□□□□□ -0.95
USP9X-208ENST00000487625 KANK3Q6NY19 840 aa9.1□□□□□ -0.95
USP9X-208ENST00000487625 NNTQ13423 1086 aa9.09□□□□□ -0.95
USP9X-208ENST00000487625 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
USP9X-208ENST00000487625 SVOPQ8N4V2 548 aa9.09□□□□□ -0.95
USP9X-208ENST00000487625 MAN1A2O60476 641 aa9.08□□□□□ -0.96
USP9X-208ENST00000487625 ARHGEF15O94989 841 aa9.08□□□□□ -0.96
USP9X-208ENST00000487625 SH3BP2P78314 561 aa9.08□□□□□ -0.96
USP9X-208ENST00000487625 WHAMMQ8TF30 809 aa9.08□□□□□ -0.96
USP9X-208ENST00000487625 KLF16Q9BXK1 252 aaPredicted RBP9.06□□□□□ -0.96
USP9X-208ENST00000487625 ADH1CP00326 375 aa9.05□□□□□ -0.96
USP9X-208ENST00000487625 WDR4P57081 412 aaKnown RBP9.05□□□□□ -0.96
USP9X-208ENST00000487625 BBXQ8WY36 941 aaPredicted RBP9.05□□□□□ -0.96
USP9X-208ENST00000487625 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
USP9X-208ENST00000487625 JUNDP17535 347 aa9.04□□□□□ -0.96
USP9X-208ENST00000487625 HIC1Q14526 733 aa9.04□□□□□ -0.96
USP9X-208ENST00000487625 RNFT1Q5M7Z0 435 aa9.04□□□□□ -0.96
USP9X-208ENST00000487625 ARHGEF1Q92888 912 aaKnown RBP9.03□□□□□ -0.96
USP9X-208ENST00000487625 HLA-CQ95604 372 aa9.03□□□□□ -0.96
USP9X-208ENST00000487625 PHOX2BQ99453 314 aa9.03□□□□□ -0.96
USP9X-208ENST00000487625 MSTNO14793 375 aa9.02□□□□□ -0.97
USP9X-208ENST00000487625 ITGB2P05107 769 aa9.02□□□□□ -0.97
USP9X-208ENST00000487625 C6orf118Q5T5N4 469 aa9.02□□□□□ -0.97
USP9X-208ENST00000487625 Q8N3U1 123 aa9.02□□□□□ -0.97
USP9X-208ENST00000487625 SPOCK3Q9BQ16 436 aa9.02□□□□□ -0.97
USP9X-208ENST00000487625 MARSP56192 900 aaKnown RBP9.01□□□□□ -0.97
USP9X-208ENST00000487625 PLA2G4EQ3MJ16 856 aa9.01□□□□□ -0.97
USP9X-208ENST00000487625 NUDT12Q9BQG2 462 aa9.01□□□□□ -0.97
USP9X-208ENST00000487625 SLURP2P0DP57 97 aa9□□□□□ -0.97
USP9X-208ENST00000487625 SPRYD3Q8NCJ5 442 aa9□□□□□ -0.97
USP9X-208ENST00000487625 MPNDQ8N594 471 aa8.99□□□□□ -0.97
USP9X-208ENST00000487625 SCARF2Q96GP6 870 aaPredicted RBP8.99□□□□□ -0.97
USP9X-208ENST00000487625 DNMT3LQ9UJW3 386 aa8.99□□□□□ -0.97
USP9X-208ENST00000487625 PLEKHG3A1L390 1219 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms