RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 FBXO31Q5XUX0 539 aaPredicted RBP10.25□□□□□ -0.77
COPS3-209ENST00000486810 FAM160A2Q8N612 972 aaPredicted RBP10.25□□□□□ -0.77
COPS3-209ENST00000486810 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
COPS3-209ENST00000486810 SPSB2Q99619 263 aa10.24□□□□□ -0.77
COPS3-209ENST00000486810 A0A0G2JS52 829 aa10.23□□□□□ -0.77
COPS3-209ENST00000486810 FMNL1O95466 1100 aaPredicted RBP10.23□□□□□ -0.77
COPS3-209ENST00000486810 RSPH6AQ9H0K4 717 aa10.23□□□□□ -0.77
COPS3-209ENST00000486810 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
COPS3-209ENST00000486810 SKIV2LQ15477 1246 aaKnown RBP10.22□□□□□ -0.77
COPS3-209ENST00000486810 Q3C1V9 767 aa10.22□□□□□ -0.77
COPS3-209ENST00000486810 PROCA1Q8NCQ7 364 aaPredicted RBP10.22□□□□□ -0.77
COPS3-209ENST00000486810 PRDM9Q9NQV7 894 aa10.22□□□□□ -0.77
COPS3-209ENST00000486810 S1PR4O95977 384 aa10.21□□□□□ -0.77
COPS3-209ENST00000486810 QPCTQ16769 361 aa10.21□□□□□ -0.77
COPS3-209ENST00000486810 TUSC1Q2TAM9 212 aa10.21□□□□□ -0.77
COPS3-209ENST00000486810 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
COPS3-209ENST00000486810 CABLES1Q8TDN4 633 aa10.21□□□□□ -0.77
COPS3-209ENST00000486810 HRCP23327 699 aa10.2□□□□□ -0.78
COPS3-209ENST00000486810 CSPP1Q1MSJ5 1256 aa10.2□□□□□ -0.78
COPS3-209ENST00000486810 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.2□□□□□ -0.78
COPS3-209ENST00000486810 LILRB3O75022 631 aa10.19□□□□□ -0.78
COPS3-209ENST00000486810 MSS51Q4VC12 460 aa10.19□□□□□ -0.78
COPS3-209ENST00000486810 USB1Q9BQ65 265 aaKnown RBP10.19□□□□□ -0.78
COPS3-209ENST00000486810 C6orf229H3BNL8 230 aa10.18□□□□□ -0.78
COPS3-209ENST00000486810 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
COPS3-209ENST00000486810 SLC6A16Q9GZN6 736 aa10.18□□□□□ -0.78
COPS3-209ENST00000486810 GOPCQ9HD26 462 aa10.18□□□□□ -0.78
COPS3-209ENST00000486810 MTMR2Q13614 643 aa10.17□□□□□ -0.78
COPS3-209ENST00000486810 RTL5Q5HYW3 569 aaPredicted RBP10.17□□□□□ -0.78
COPS3-209ENST00000486810 PRPF38BQ5VTL8 546 aaKnown RBP10.17□□□□□ -0.78
COPS3-209ENST00000486810 RETREG3Q86VR2 466 aa10.17□□□□□ -0.78
COPS3-209ENST00000486810 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.17□□□□□ -0.78
COPS3-209ENST00000486810 RNF223E7ERA6 249 aa10.16□□□□□ -0.78
COPS3-209ENST00000486810 CFAP99D6REC4 459 aa10.15□□□□□ -0.78
COPS3-209ENST00000486810 MMP16P51512 607 aa10.15□□□□□ -0.78
COPS3-209ENST00000486810 ZBTB3Q9H5J0 574 aa10.15□□□□□ -0.78
COPS3-209ENST00000486810 PRR7Q8TB68 274 aa10.14□□□□□ -0.79
COPS3-209ENST00000486810 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
COPS3-209ENST00000486810 DXOO77932 396 aaKnown RBP10.13□□□□□ -0.79
COPS3-209ENST00000486810 PLA2G2CQ5R387 149 aa10.13□□□□□ -0.79
COPS3-209ENST00000486810 SPDYE5A6NIY4 337 aa10.11□□□□□ -0.79
COPS3-209ENST00000486810 JUNDP17535 347 aa10.11□□□□□ -0.79
COPS3-209ENST00000486810 PPP2R2DQ66LE6 453 aa10.11□□□□□ -0.79
COPS3-209ENST00000486810 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
COPS3-209ENST00000486810 PCMTD1Q96MG8 357 aaPredicted RBP10.1□□□□□ -0.79
COPS3-209ENST00000486810 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
COPS3-209ENST00000486810 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
COPS3-209ENST00000486810 GGCXP38435 758 aa10.09□□□□□ -0.79
COPS3-209ENST00000486810 NUTM2DQ5VT03 806 aaPredicted RBP10.09□□□□□ -0.79
COPS3-209ENST00000486810 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
COPS3-209ENST00000486810 FCF1Q9Y324 198 aaKnown RBP10.09□□□□□ -0.79
COPS3-209ENST00000486810 DESI1Q6ICB0 168 aa10.08□□□□□ -0.8
COPS3-209ENST00000486810 PER1O15534 1290 aaPredicted RBP10.06□□□□□ -0.8
COPS3-209ENST00000486810 RFC5P40937 340 aa10.06□□□□□ -0.8
COPS3-209ENST00000486810 LYPD8Q6UX82 237 aa10.05□□□□□ -0.8
COPS3-209ENST00000486810 LIAT1Q6ZQX7 453 aa10.05□□□□□ -0.8
COPS3-209ENST00000486810 CTDSPL2Q05D32 466 aa10.04□□□□□ -0.8
COPS3-209ENST00000486810 ATP1B4Q9UN42 357 aaPredicted RBP10.04□□□□□ -0.8
COPS3-209ENST00000486810 PTPRNQ16849 979 aa10.03□□□□□ -0.8
COPS3-209ENST00000486810 PTCRAQ6ISU1 281 aaPredicted RBP10.03□□□□□ -0.8
COPS3-209ENST00000486810 NUDT12Q9BQG2 462 aa10.03□□□□□ -0.8
COPS3-209ENST00000486810 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.81
COPS3-209ENST00000486810 TSC1Q92574 1164 aa10.02□□□□□ -0.81
COPS3-209ENST00000486810 F12P00748 615 aaPredicted RBP10.01□□□□□ -0.81
COPS3-209ENST00000486810 CCDC24Q8N4L8 307 aa10.01□□□□□ -0.81
COPS3-209ENST00000486810 PRKD2Q9BZL6 878 aa10.01□□□□□ -0.81
COPS3-209ENST00000486810 EVA1BQ9NVM1 165 aa10.01□□□□□ -0.81
COPS3-209ENST00000486810 RGS20O76081 388 aa10□□□□□ -0.81
COPS3-209ENST00000486810 CCNYL3P0C7X3 344 aa10□□□□□ -0.81
COPS3-209ENST00000486810 AP1G2O75843 785 aa9.99□□□□□ -0.81
COPS3-209ENST00000486810 SLC19A1P41440 591 aa9.99□□□□□ -0.81
COPS3-209ENST00000486810 LRRN4Q8WUT4 740 aa9.99□□□□□ -0.81
COPS3-209ENST00000486810 MAP10Q9P2G4 905 aa9.99□□□□□ -0.81
COPS3-209ENST00000486810 KCNH2Q12809 1159 aa9.98□□□□□ -0.81
COPS3-209ENST00000486810 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
COPS3-209ENST00000486810 V9GY48 417 aaPredicted RBP9.98□□□□□ -0.81
COPS3-209ENST00000486810 USP17L8P0C7I0 530 aa9.96□□□□□ -0.82
COPS3-209ENST00000486810 RPIAP49247 311 aa9.96□□□□□ -0.82
COPS3-209ENST00000486810 SPRYD7Q5W111 196 aa9.96□□□□□ -0.82
COPS3-209ENST00000486810 HMX1Q9NP08 348 aaPredicted RBP9.96□□□□□ -0.82
COPS3-209ENST00000486810 TMEM259Q4ZIN3 620 aa9.94□□□□□ -0.82
COPS3-209ENST00000486810 UNC93B1Q9H1C4 597 aa9.94□□□□□ -0.82
COPS3-209ENST00000486810 TRIM32Q13049 653 aa9.93□□□□□ -0.82
COPS3-209ENST00000486810 EPS8L1Q8TE68 723 aa9.93□□□□□ -0.82
COPS3-209ENST00000486810 CTHP32929 405 aa9.92□□□□□ -0.82
COPS3-209ENST00000486810 SKOR1P84550 965 aa9.92□□□□□ -0.82
COPS3-209ENST00000486810 MYT1Q01538 1121 aa9.92□□□□□ -0.82
COPS3-209ENST00000486810 ZNF598Q86UK7 904 aaKnown RBP9.92□□□□□ -0.82
COPS3-209ENST00000486810 ZBTB24O43167 697 aaPredicted RBP9.91□□□□□ -0.82
COPS3-209ENST00000486810 NR6A1Q15406 480 aa9.91□□□□□ -0.82
COPS3-209ENST00000486810 TRIM67Q6ZTA4 783 aa9.91□□□□□ -0.82
COPS3-209ENST00000486810 SNRKQ9NRH2 765 aa9.91□□□□□ -0.82
COPS3-209ENST00000486810 ZNF697Q5TEC3 545 aa9.9□□□□□ -0.82
COPS3-209ENST00000486810 BANK1Q8NDB2 785 aa9.9□□□□□ -0.82
COPS3-209ENST00000486810 GJD4Q96KN9 370 aaPredicted RBP9.9□□□□□ -0.82
COPS3-209ENST00000486810 TRIM34Q9BYJ4 488 aa9.9□□□□□ -0.82
COPS3-209ENST00000486810 MTMR14Q8NCE2 650 aa9.89□□□□□ -0.83
COPS3-209ENST00000486810 BAP1Q92560 729 aa9.89□□□□□ -0.83
COPS3-209ENST00000486810 PKD2L1Q9P0L9 805 aa9.89□□□□□ -0.83
COPS3-209ENST00000486810 CD2BP2O95400 341 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms