RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 ERCC6Q03468 1493 aa8.35□□□□□ -1.07
KPNA1-208ENST00000485027 NAP1L5Q96NT1 182 aaPredicted RBP8.34□□□□□ -1.07
KPNA1-208ENST00000485027 SERPINB4P48594 390 aa8.33□□□□□ -1.08
KPNA1-208ENST00000485027 PRIM1P49642 420 aaKnown RBP8.33□□□□□ -1.08
KPNA1-208ENST00000485027 PTGDRQ13258 359 aa8.33□□□□□ -1.08
KPNA1-208ENST00000485027 TMEM164Q5U3C3 297 aa8.33□□□□□ -1.08
KPNA1-208ENST00000485027 FBXO33Q7Z6M2 555 aa8.33□□□□□ -1.08
KPNA1-208ENST00000485027 NLGN1Q8N2Q7 840 aa8.33□□□□□ -1.08
KPNA1-208ENST00000485027 MORC4Q8TE76 937 aa8.33□□□□□ -1.08
KPNA1-208ENST00000485027 STK32AQ8WU08 396 aa8.33□□□□□ -1.08
KPNA1-208ENST00000485027 METTL14Q9HCE5 456 aaKnown RBP8.33□□□□□ -1.08
KPNA1-208ENST00000485027 ZMIZ1Q9ULJ6 1067 aa8.33□□□□□ -1.08
KPNA1-208ENST00000485027 MCCD1P59942 119 aaPredicted RBP8.32□□□□□ -1.08
KPNA1-208ENST00000485027 PTPROQ16827 1216 aa8.32□□□□□ -1.08
KPNA1-208ENST00000485027 DHX38Q92620 1227 aaKnown RBP8.32□□□□□ -1.08
KPNA1-208ENST00000485027 TANGO6Q9C0B7 1094 aa8.32□□□□□ -1.08
KPNA1-208ENST00000485027 FAM217BQ9NTX9 383 aaPredicted RBP8.32□□□□□ -1.08
KPNA1-208ENST00000485027 hCG_2014768A0A024R1R8 64 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 GPR37L1O60883 481 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 ZEB1P37275 1124 aaPredicted RBP8.31□□□□□ -1.08
KPNA1-208ENST00000485027 CCDC144BQ3MJ40 725 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 SDE2Q6IQ49 451 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 TMTC2Q8N394 836 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 PIF1Q9H611 641 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 IGBP1P78318 339 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 HDLBPQ00341 1268 aaKnown RBP8.31□□□□□ -1.08
KPNA1-208ENST00000485027 VAC14Q08AM6 782 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 CCDC181Q5TID7 509 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 NLRP7Q8WX94 980 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 PIK3R5Q8WYR1 880 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 ALG2Q9H553 416 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 SLAIN2Q9P270 581 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 TBX22Q9Y458 520 aa8.31□□□□□ -1.08
KPNA1-208ENST00000485027 MAFBQ9Y5Q3 323 aaPredicted RBP8.31□□□□□ -1.08
KPNA1-208ENST00000485027 CFTRP13569 1480 aa8.3□□□□□ -1.08
KPNA1-208ENST00000485027 RALBP1Q15311 655 aa8.3□□□□□ -1.08
KPNA1-208ENST00000485027 KCNB2Q92953 911 aa8.3□□□□□ -1.08
KPNA1-208ENST00000485027 CUX2O14529 1486 aa8.3□□□□□ -1.08
KPNA1-208ENST00000485027 CCDC194A0A1B0GVG4 234 aa8.29□□□□□ -1.08
KPNA1-208ENST00000485027 SOCS7O14512 581 aa8.29□□□□□ -1.08
KPNA1-208ENST00000485027 BACH2Q9BYV9 841 aa8.29□□□□□ -1.08
KPNA1-208ENST00000485027 PRM3Q9NNZ6 103 aa8.29□□□□□ -1.08
KPNA1-208ENST00000485027 TERF2IPQ9NYB0 399 aa8.29□□□□□ -1.08
KPNA1-208ENST00000485027 CCDC88BA6NC98 1476 aa8.29□□□□□ -1.08
KPNA1-208ENST00000485027 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
KPNA1-208ENST00000485027 PMM1Q92871 262 aa8.29□□□□□ -1.08
KPNA1-208ENST00000485027 GJD4Q96KN9 370 aaPredicted RBP8.29□□□□□ -1.08
KPNA1-208ENST00000485027 GPHNQ9NQX3 736 aaPredicted RBP8.29□□□□□ -1.08
KPNA1-208ENST00000485027 CUEDC1Q9NWM3 386 aaPredicted RBP8.29□□□□□ -1.08
KPNA1-208ENST00000485027 TCEAL1Q15170 157 aa8.28□□□□□ -1.08
KPNA1-208ENST00000485027 FAN1Q9Y2M0 1017 aa8.28□□□□□ -1.08
KPNA1-208ENST00000485027 PDS5BQ9NTI5 1447 aa8.28□□□□□ -1.08
KPNA1-208ENST00000485027 PPFIA4O75335 1185 aa8.27□□□□□ -1.09
KPNA1-208ENST00000485027 ARID4AP29374 1257 aaPredicted RBP8.27□□□□□ -1.09
KPNA1-208ENST00000485027 SCNN1AP37088 669 aa8.27□□□□□ -1.09
KPNA1-208ENST00000485027 CHPF2Q9P2E5 772 aa8.27□□□□□ -1.09
KPNA1-208ENST00000485027 GABBR1Q9UBS5 961 aa8.27□□□□□ -1.09
KPNA1-208ENST00000485027 BIN2Q9UBW5 565 aaPredicted RBP8.27□□□□□ -1.09
KPNA1-208ENST00000485027 IQSEC3Q9UPP2 1182 aaPredicted RBP8.27□□□□□ -1.09
KPNA1-208ENST00000485027 WDR62O43379 1518 aa8.27□□□□□ -1.09
KPNA1-208ENST00000485027 SSFA2P28290 1259 aa8.26□□□□□ -1.09
KPNA1-208ENST00000485027 DSG2Q14126 1118 aa8.26□□□□□ -1.09
KPNA1-208ENST00000485027 SMC5Q8IY18 1101 aa8.26□□□□□ -1.09
KPNA1-208ENST00000485027 NME8Q8N427 588 aa8.26□□□□□ -1.09
KPNA1-208ENST00000485027 GPATCH11Q8N954 259 aa8.26□□□□□ -1.09
KPNA1-208ENST00000485027 PRR7Q8TB68 274 aa8.26□□□□□ -1.09
KPNA1-208ENST00000485027 TINF2Q9BSI4 451 aa8.26□□□□□ -1.09
KPNA1-208ENST00000485027 CEP164Q9UPV0 1460 aa8.26□□□□□ -1.09
KPNA1-208ENST00000485027 TBC1D9Q6ZT07 1266 aa8.25□□□□□ -1.09
KPNA1-208ENST00000485027 CNPY4Q8N129 248 aa8.25□□□□□ -1.09
KPNA1-208ENST00000485027 PRKAG2Q9UGJ0 569 aa8.25□□□□□ -1.09
KPNA1-208ENST00000485027 FANCD2Q9BXW9 1451 aa8.25□□□□□ -1.09
KPNA1-208ENST00000485027 AP1G2O75843 785 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 PTMSP20962 102 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 TSPYL2Q9H2G4 693 aaPredicted RBP8.24□□□□□ -1.09
KPNA1-208ENST00000485027 MAGEC2Q9UBF1 373 aaPredicted RBP8.24□□□□□ -1.09
KPNA1-208ENST00000485027 MRC2Q9UBG0 1479 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 U2SURPO15042 1029 aaKnown RBP8.24□□□□□ -1.09
KPNA1-208ENST00000485027 CREB3O43889 395 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 USP17L8P0C7I0 530 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 WASHC4Q2M389 1173 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 LDLRAD1Q5T700 205 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 FAM9BQ8IZU0 186 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 ZNF710Q8N1W2 664 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 DDX12PQ92771 950 aa8.24□□□□□ -1.09
KPNA1-208ENST00000485027 GTF2F1P35269 517 aaKnown RBP eCLIP8.23□□□□□ -1.09
KPNA1-208ENST00000485027 CACNB1Q02641 598 aaPredicted RBP8.23□□□□□ -1.09
KPNA1-208ENST00000485027 QPCTQ16769 361 aa8.23□□□□□ -1.09
KPNA1-208ENST00000485027 ZNF579Q8NAF0 562 aaKnown RBP8.23□□□□□ -1.09
KPNA1-208ENST00000485027 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
KPNA1-208ENST00000485027 KANK4Q5T7N3 995 aaPredicted RBP8.22□□□□□ -1.09
KPNA1-208ENST00000485027 ELOAQ14241 798 aaKnown RBP8.22□□□□□ -1.09
KPNA1-208ENST00000485027 CSPP1Q1MSJ5 1256 aa8.22□□□□□ -1.09
KPNA1-208ENST00000485027 RIC3Q7Z5B4 369 aa8.22□□□□□ -1.09
KPNA1-208ENST00000485027 SPOCK3Q9BQ16 436 aa8.22□□□□□ -1.09
KPNA1-208ENST00000485027 NOP58Q9Y2X3 529 aaKnown RBP8.22□□□□□ -1.09
KPNA1-208ENST00000485027 PAX3P23760 479 aa8.21□□□□□ -1.1
KPNA1-208ENST00000485027 JAZF1Q86VZ6 243 aa8.21□□□□□ -1.1
KPNA1-208ENST00000485027 PMFBP1Q8TBY8 1022 aa8.21□□□□□ -1.1
KPNA1-208ENST00000485027 UBA5Q9GZZ9 404 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms