RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 SIRT1Q96EB6 747 aa4.71□□□□□ -1.66
FXN-204ENST00000484259 PCMTD1Q96MG8 357 aaPredicted RBP4.71□□□□□ -1.66
FXN-204ENST00000484259 NBPF3Q9H094 633 aa4.71□□□□□ -1.66
FXN-204ENST00000484259 METTL14Q9HCE5 456 aaKnown RBP4.71□□□□□ -1.66
FXN-204ENST00000484259 IVNS1ABPQ9Y6Y0 642 aa4.71□□□□□ -1.66
FXN-204ENST00000484259 ERICH6BQ5W0A0 696 aa4.7□□□□□ -1.66
FXN-204ENST00000484259 CADPS2Q86UW7 1296 aa4.7□□□□□ -1.66
FXN-204ENST00000484259 CCER1Q8TC90 406 aaPredicted RBP4.7□□□□□ -1.66
FXN-204ENST00000484259 KIAA1522Q9P206 1035 aaPredicted RBP4.7□□□□□ -1.66
FXN-204ENST00000484259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.69□□□□□ -1.66
FXN-204ENST00000484259 GPIHBP1Q8IV16 184 aa4.69□□□□□ -1.66
FXN-204ENST00000484259 SMC5Q8IY18 1101 aa4.69□□□□□ -1.66
FXN-204ENST00000484259 FBXO22Q8NEZ5 403 aa4.69□□□□□ -1.66
FXN-204ENST00000484259 CSB-PGBD3P0DP91 1061 aa4.68□□□□□ -1.66
FXN-204ENST00000484259 ZC3H6P61129 1189 aaKnown RBP4.68□□□□□ -1.66
FXN-204ENST00000484259 NYAP1Q6ZVC0 841 aa4.68□□□□□ -1.66
FXN-204ENST00000484259 WWC1Q8IX03 1113 aa4.68□□□□□ -1.66
FXN-204ENST00000484259 ANKK1Q8NFD2 765 aa4.68□□□□□ -1.66
FXN-204ENST00000484259 PPP1R1BQ9UD71 204 aaPredicted RBP4.68□□□□□ -1.66
FXN-204ENST00000484259 ZNF330Q9Y3S2 320 aaPredicted RBP4.68□□□□□ -1.66
FXN-204ENST00000484259 TBC1D12O60347 775 aa4.67□□□□□ -1.66
FXN-204ENST00000484259 RAB11FIP3O75154 756 aa4.67□□□□□ -1.66
FXN-204ENST00000484259 EIF3JO75822 258 aaKnown RBP4.67□□□□□ -1.66
FXN-204ENST00000484259 RBM10P98175 930 aaKnown RBP4.67□□□□□ -1.66
FXN-204ENST00000484259 OS9Q13438 667 aaPredicted RBP4.67□□□□□ -1.66
FXN-204ENST00000484259 APBB1IPQ7Z5R6 666 aaPredicted RBP4.67□□□□□ -1.66
FXN-204ENST00000484259 SGSM3Q96HU1 749 aa4.67□□□□□ -1.66
FXN-204ENST00000484259 ZBED2Q9BTP6 218 aa4.67□□□□□ -1.66
FXN-204ENST00000484259 PRKD2Q9BZL6 878 aa4.67□□□□□ -1.66
FXN-204ENST00000484259 BCL2L12Q9HB09 334 aa4.67□□□□□ -1.66
FXN-204ENST00000484259 SLC52A1Q9NWF4 448 aa4.67□□□□□ -1.66
FXN-204ENST00000484259 STK24Q9Y6E0 443 aa4.67□□□□□ -1.66
FXN-204ENST00000484259 PTPREP23469 700 aa4.66□□□□□ -1.66
FXN-204ENST00000484259 LONRF3Q496Y0 759 aa4.66□□□□□ -1.66
FXN-204ENST00000484259 NOP9Q86U38 636 aaKnown RBP4.66□□□□□ -1.66
FXN-204ENST00000484259 NME8Q8N427 588 aa4.66□□□□□ -1.66
FXN-204ENST00000484259 POM121Q96HA1 1249 aa4.66□□□□□ -1.66
FXN-204ENST00000484259 ANO8Q9HCE9 1232 aaPredicted RBP4.66□□□□□ -1.66
FXN-204ENST00000484259 ARID4AP29374 1257 aaPredicted RBP4.65□□□□□ -1.67
FXN-204ENST00000484259 FOXD4L6Q3SYB3 417 aaPredicted RBP4.65□□□□□ -1.67
FXN-204ENST00000484259 RBM26Q5T8P6 1007 aaKnown RBP4.65□□□□□ -1.67
FXN-204ENST00000484259 GIMAP6Q6P9H5 292 aa4.65□□□□□ -1.67
FXN-204ENST00000484259 FOXD4L3Q6VB84 417 aaPredicted RBP4.65□□□□□ -1.67
FXN-204ENST00000484259 FAM43BQ6ZT52 329 aaPredicted RBP4.65□□□□□ -1.67
FXN-204ENST00000484259 ZNF454Q8N9F8 522 aa4.65□□□□□ -1.67
FXN-204ENST00000484259 PBXIP1Q96AQ6 731 aa4.65□□□□□ -1.67
FXN-204ENST00000484259 PDZRN3Q9UPQ7 1066 aa4.65□□□□□ -1.67
FXN-204ENST00000484259 PHF14O94880 888 aa4.64□□□□□ -1.67
FXN-204ENST00000484259 CALRP27797 417 aaKnown RBP4.64□□□□□ -1.67
FXN-204ENST00000484259 BCAMP50895 628 aa4.64□□□□□ -1.67
FXN-204ENST00000484259 IGBP1P78318 339 aa4.64□□□□□ -1.67
FXN-204ENST00000484259 WDR78Q5VTH9 848 aa4.64□□□□□ -1.67
FXN-204ENST00000484259 TREML4Q6UXN2 200 aa4.64□□□□□ -1.67
FXN-204ENST00000484259 ZNF662Q6ZS27 426 aa4.64□□□□□ -1.67
FXN-204ENST00000484259 TXNDC2Q86VQ3 553 aa4.64□□□□□ -1.67
FXN-204ENST00000484259 FAM9BQ8IZU0 186 aa4.64□□□□□ -1.67
FXN-204ENST00000484259 IPO4Q8TEX9 1081 aaKnown RBP4.64□□□□□ -1.67
FXN-204ENST00000484259 CALR3Q96L12 384 aaKnown RBP4.64□□□□□ -1.67
FXN-204ENST00000484259 STK17AQ9UEE5 414 aa4.64□□□□□ -1.67
FXN-204ENST00000484259 V9GY48 417 aaPredicted RBP4.64□□□□□ -1.67
FXN-204ENST00000484259 LIG1P18858 919 aa4.63□□□□□ -1.67
FXN-204ENST00000484259 NAALADL2Q58DX5 795 aa4.63□□□□□ -1.67
FXN-204ENST00000484259 KRBA2Q6ZNG9 492 aa4.63□□□□□ -1.67
FXN-204ENST00000484259 CCDC180Q9P1Z9 1646 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 SOWAHBA6NEL2 793 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 PEX14O75381 377 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 ZNF16P17020 682 aaPredicted RBP4.62□□□□□ -1.67
FXN-204ENST00000484259 SKIV2LQ15477 1246 aaKnown RBP4.62□□□□□ -1.67
FXN-204ENST00000484259 HSP90AB2PQ58FF8 381 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 TSHZ1Q6ZSZ6 1077 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 DPH6Q7L8W6 267 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 RBM46Q8TBY0 533 aaKnown RBP4.62□□□□□ -1.67
FXN-204ENST00000484259 MTA3Q9BTC8 594 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 CDCA7Q9BWT1 371 aaPredicted RBP4.62□□□□□ -1.67
FXN-204ENST00000484259 VRTNQ9H8Y1 702 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 NAP1L2Q9ULW6 460 aaPredicted RBP4.62□□□□□ -1.67
FXN-204ENST00000484259 GNEQ9Y223 722 aaKnown RBP4.62□□□□□ -1.67
FXN-204ENST00000484259 TMA7Q9Y2S6 64 aaKnown RBP4.62□□□□□ -1.67
FXN-204ENST00000484259 COG6Q9Y2V7 657 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 SBNO2Q9Y2G9 1366 aa4.62□□□□□ -1.67
FXN-204ENST00000484259 SPDYE5A6NIY4 337 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 CREB3O43889 395 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 SH3BP5O60239 455 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 MAP4K4O95819 1239 aaPredicted RBP4.61□□□□□ -1.67
FXN-204ENST00000484259 IBSPP21815 317 aaPredicted RBP4.61□□□□□ -1.67
FXN-204ENST00000484259 VAMP1P23763 118 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 FOSBP53539 338 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 MYBPC2Q14324 1141 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 AMHR2Q16671 573 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 ZFYVE27Q5T4F4 411 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 SECISBP2LQ93073 1101 aaKnown RBP4.61□□□□□ -1.67
FXN-204ENST00000484259 YTHDC1Q96MU7 727 aaKnown RBP4.61□□□□□ -1.67
FXN-204ENST00000484259 MFRPQ9BY79 579 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 JADE2Q9NQC1 790 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 WBP1LQ9NX94 342 aa4.61□□□□□ -1.67
FXN-204ENST00000484259 MINK1Q8N4C8 1332 aaPredicted RBP4.61□□□□□ -1.67
FXN-204ENST00000484259 hCG_2014768A0A024R1R8 64 aa4.6□□□□□ -1.67
FXN-204ENST00000484259 CCDC194A0A1B0GVG4 234 aa4.6□□□□□ -1.67
FXN-204ENST00000484259 TLDC2A0PJX2 215 aa4.6□□□□□ -1.67
FXN-204ENST00000484259 ANP32CO43423 234 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 854.5 ms