RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SPDYE6P0CI01 402 aa10.04□□□□□ -0.8
BRCA1-216ENST00000484087 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
BRCA1-216ENST00000484087 AMOTL2Q9Y2J4 779 aa10.04□□□□□ -0.8
BRCA1-216ENST00000484087 TBX22Q9Y458 520 aa10.04□□□□□ -0.8
BRCA1-216ENST00000484087 TOM1O60784 492 aa10.04□□□□□ -0.8
BRCA1-216ENST00000484087 HDGFP51858 240 aaKnown RBP10.04□□□□□ -0.8
BRCA1-216ENST00000484087 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
BRCA1-216ENST00000484087 C14orf37Q86TY3 774 aa10.02□□□□□ -0.81
BRCA1-216ENST00000484087 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
BRCA1-216ENST00000484087 MSH6P52701 1360 aa10.01□□□□□ -0.81
BRCA1-216ENST00000484087 ROBO2Q9HCK4 1378 aa10.01□□□□□ -0.81
BRCA1-216ENST00000484087 PIK3C2GO75747 1445 aa10.01□□□□□ -0.81
BRCA1-216ENST00000484087 PHLPP1O60346 1717 aa10.01□□□□□ -0.81
BRCA1-216ENST00000484087 PIK3R4Q99570 1358 aa10□□□□□ -0.81
BRCA1-216ENST00000484087 LHX8Q68G74 356 aa10□□□□□ -0.81
BRCA1-216ENST00000484087 TMEM132EQ6IEE7 984 aa10□□□□□ -0.81
BRCA1-216ENST00000484087 KNDC1Q76NI1 1749 aa10□□□□□ -0.81
BRCA1-216ENST00000484087 VGFO15240 615 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-216ENST00000484087 MED1Q15648 1581 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-216ENST00000484087 STK26Q9P289 416 aa9.98□□□□□ -0.81
BRCA1-216ENST00000484087 MYOM2P54296 1465 aa9.98□□□□□ -0.81
BRCA1-216ENST00000484087 RPGRIP1LQ68CZ1 1315 aa9.98□□□□□ -0.81
BRCA1-216ENST00000484087 PLEKHH1Q9ULM0 1364 aa9.98□□□□□ -0.81
BRCA1-216ENST00000484087 KDM2AQ9Y2K7 1162 aa9.98□□□□□ -0.81
BRCA1-216ENST00000484087 NRXN1Q9ULB1 1477 aa9.98□□□□□ -0.81
BRCA1-216ENST00000484087 LAMC1P11047 1609 aa9.97□□□□□ -0.81
BRCA1-216ENST00000484087 COL16A1Q07092 1604 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-216ENST00000484087 PTCH1Q13635 1447 aa9.97□□□□□ -0.81
BRCA1-216ENST00000484087 ADGRL3Q9HAR2 1447 aa9.97□□□□□ -0.81
BRCA1-216ENST00000484087 FKBP8Q14318 412 aa9.97□□□□□ -0.81
BRCA1-216ENST00000484087 CFAP70Q5T0N1 1121 aa9.97□□□□□ -0.81
BRCA1-216ENST00000484087 DISP3Q9P2K9 1392 aa9.96□□□□□ -0.81
BRCA1-216ENST00000484087 MST1RQ04912 1400 aa9.96□□□□□ -0.81
BRCA1-216ENST00000484087 DDX17Q92841 729 aaKnown RBP9.96□□□□□ -0.82
BRCA1-216ENST00000484087 RGPD8O14715 1765 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-216ENST00000484087 ADGRB1O14514 1584 aa9.95□□□□□ -0.82
BRCA1-216ENST00000484087 WAPLQ7Z5K2 1190 aa9.95□□□□□ -0.82
BRCA1-216ENST00000484087 DCAF11Q8TEB1 546 aa9.95□□□□□ -0.82
BRCA1-216ENST00000484087 SIN3AQ96ST3 1273 aa9.95□□□□□ -0.82
BRCA1-216ENST00000484087 SLAIN2Q9P270 581 aa9.95□□□□□ -0.82
BRCA1-216ENST00000484087 YTHDC2Q9H6S0 1430 aaKnown RBP9.95□□□□□ -0.82
BRCA1-216ENST00000484087 NHSL1Q5SYE7 1610 aa9.94□□□□□ -0.82
BRCA1-216ENST00000484087 FAM135BQ49AJ0 1406 aa9.94□□□□□ -0.82
BRCA1-216ENST00000484087 ARHGEF28Q8N1W1 1705 aaKnown RBP9.94□□□□□ -0.82
BRCA1-216ENST00000484087 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
BRCA1-216ENST00000484087 ATF3P18847 181 aa9.93□□□□□ -0.82
BRCA1-216ENST00000484087 SAFB2Q14151 953 aaKnown RBP eCLIP9.93□□□□□ -0.821e-6■□□□□ 10.7
BRCA1-216ENST00000484087 C19orf44Q9H6X5 657 aa9.93□□□□□ -0.82
BRCA1-216ENST00000484087 LRPPRCP42704 1394 aaKnown RBP9.92□□□□□ -0.82
BRCA1-216ENST00000484087 TECPR2O15040 1411 aa9.92□□□□□ -0.82
BRCA1-216ENST00000484087 PRAG1Q86YV5 1406 aa9.92□□□□□ -0.82
BRCA1-216ENST00000484087 NCOA3Q9Y6Q9 1424 aa9.92□□□□□ -0.82
BRCA1-216ENST00000484087 CDC42BPGQ6DT37 1551 aa9.92□□□□□ -0.82
BRCA1-216ENST00000484087 AHDC1Q5TGY3 1603 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-216ENST00000484087 FMN2Q9NZ56 1722 aa9.92□□□□□ -0.82
BRCA1-216ENST00000484087 DCCP43146 1447 aa9.92□□□□□ -0.82
BRCA1-216ENST00000484087 ILDR2Q71H61 639 aa9.91□□□□□ -0.82
BRCA1-216ENST00000484087 BRINP3Q76B58 766 aa9.91□□□□□ -0.82
BRCA1-216ENST00000484087 SPDYE1Q8NFV5 336 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-216ENST00000484087 C1orf167Q5SNV9 1468 aa9.91□□□□□ -0.82
BRCA1-216ENST00000484087 C19orf67A6NJJ6 358 aa9.91□□□□□ -0.82
BRCA1-216ENST00000484087 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
BRCA1-216ENST00000484087 MKRN4PQ13434 485 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-216ENST00000484087 NEUROD1Q13562 356 aa9.91□□□□□ -0.82
BRCA1-216ENST00000484087 CADPS2Q86UW7 1296 aa9.91□□□□□ -0.82
BRCA1-216ENST00000484087 C14orf93Q9H972 538 aaKnown RBP9.91□□□□□ -0.82
BRCA1-216ENST00000484087 TIMELESSQ9UNS1 1208 aa9.91□□□□□ -0.82
BRCA1-216ENST00000484087 GABBR2O75899 941 aa9.9□□□□□ -0.83
BRCA1-216ENST00000484087 ORAI2Q96SN7 254 aa9.9□□□□□ -0.83
BRCA1-216ENST00000484087 LRP6O75581 1613 aa9.9□□□□□ -0.83
BRCA1-216ENST00000484087 USP32Q8NFA0 1604 aa9.9□□□□□ -0.83
BRCA1-216ENST00000484087 SHPRHQ149N8 1683 aa9.89□□□□□ -0.83
BRCA1-216ENST00000484087 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-216ENST00000484087 TRAK1Q9UPV9 953 aa9.89□□□□□ -0.83
BRCA1-216ENST00000484087 SSUH2Q9Y2M2 353 aa9.89□□□□□ -0.83
BRCA1-216ENST00000484087 ABCC11Q96J66 1382 aa9.88□□□□□ -0.83
BRCA1-216ENST00000484087 TRPM1Q7Z4N2 1603 aa9.88□□□□□ -0.83
BRCA1-216ENST00000484087 PRAM1Q96QH2 718 aa9.88□□□□□ -0.83
BRCA1-216ENST00000484087 HIRIP3Q9BW71 556 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-216ENST00000484087 XPCQ01831 940 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-216ENST00000484087 CLEC11AQ9Y240 323 aa9.87□□□□□ -0.83
BRCA1-216ENST00000484087 KIAA1210Q9ULL0 1709 aa9.87□□□□□ -0.83
BRCA1-216ENST00000484087 DLC1Q96QB1 1528 aa9.86□□□□□ -0.83
BRCA1-216ENST00000484087 NBPF1Q3BBV0 1214 aa9.86□□□□□ -0.83
BRCA1-216ENST00000484087 L3MBTL2Q969R5 705 aa9.86□□□□□ -0.83
BRCA1-216ENST00000484087 PLSCR2Q9NRY7 297 aa9.86□□□□□ -0.83
BRCA1-216ENST00000484087 ADGRB2O60241 1585 aa9.86□□□□□ -0.83
BRCA1-216ENST00000484087 MINK1Q8N4C8 1332 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-216ENST00000484087 QRICH2Q9H0J4 1663 aa9.85□□□□□ -0.83
BRCA1-216ENST00000484087 ZNF692Q9BU19 519 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-216ENST00000484087 TONSLQ96HA7 1378 aa9.84□□□□□ -0.83
BRCA1-216ENST00000484087 JCADQ9P266 1359 aa9.84□□□□□ -0.83
BRCA1-216ENST00000484087 ESCO1Q5FWF5 840 aa9.84□□□□□ -0.83
BRCA1-216ENST00000484087 POGKQ9P215 609 aa9.84□□□□□ -0.83
BRCA1-216ENST00000484087 KIF1AQ12756 1690 aa9.83□□□□□ -0.84
BRCA1-216ENST00000484087 NUTM2BA6NNL0 878 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-216ENST00000484087 NUTM2EB1AL46 878 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-216ENST00000484087 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
BRCA1-216ENST00000484087 NUTM2AQ8IVF1 878 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-216ENST00000484087 RGS17Q9UGC6 210 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms