RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 RNF214Q8ND24 703 aa11.61□□□□□ -0.55
CDK5RAP2-216ENST00000483412 AMPHP49418 695 aa11.61□□□□□ -0.55
CDK5RAP2-216ENST00000483412 VPS53Q5VIR6 699 aa11.61□□□□□ -0.55
CDK5RAP2-216ENST00000483412 CHMP4CQ96CF2 233 aa11.61□□□□□ -0.55
CDK5RAP2-216ENST00000483412 C9orf84Q5VXU9 1444 aa11.61□□□□□ -0.55
CDK5RAP2-216ENST00000483412 FRAT2O75474 233 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP2-216ENST00000483412 MIA2Q96PC5 1412 aa11.6□□□□□ -0.55
CDK5RAP2-216ENST00000483412 PLEKHH2Q8IVE3 1493 aa11.6□□□□□ -0.55
CDK5RAP2-216ENST00000483412 AK7Q96M32 723 aa11.6□□□□□ -0.55
CDK5RAP2-216ENST00000483412 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
CDK5RAP2-216ENST00000483412 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
CDK5RAP2-216ENST00000483412 MAGI1Q96QZ7 1491 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP2-216ENST00000483412 INTS3Q68E01 1043 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP2-216ENST00000483412 RUFY2Q8WXA3 655 aa11.6□□□□□ -0.55
CDK5RAP2-216ENST00000483412 RUFY1Q96T51 708 aa11.6□□□□□ -0.55
CDK5RAP2-216ENST00000483412 IPO7O95373 1038 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP2-216ENST00000483412 ZKSCAN1P17029 563 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP2-216ENST00000483412 AKAP17AQ02040 695 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP2-216ENST00000483412 SUPT6HQ7KZ85 1726 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP2-216ENST00000483412 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.59□□□□□ -0.55
CDK5RAP2-216ENST00000483412 EPRSP07814 1512 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP2-216ENST00000483412 ACBD3Q9H3P7 528 aa11.59□□□□□ -0.55
CDK5RAP2-216ENST00000483412 FOSBP53539 338 aa11.59□□□□□ -0.55
CDK5RAP2-216ENST00000483412 HMGB1P09429 215 aaKnown RBP11.58□□□□□ -0.55
CDK5RAP2-216ENST00000483412 CAVIN1Q6NZI2 390 aaKnown RBP11.58□□□□□ -0.55
CDK5RAP2-216ENST00000483412 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.55
CDK5RAP2-216ENST00000483412 CCDC66A2RUB6 948 aa11.58□□□□□ -0.56
CDK5RAP2-216ENST00000483412 TRIM29Q14134 588 aa11.58□□□□□ -0.56
CDK5RAP2-216ENST00000483412 BIVM-ERCC5R4GMW8 1640 aa11.58□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CCDC173Q0VFZ6 552 aa11.58□□□□□ -0.56
CDK5RAP2-216ENST00000483412 LNPKQ9C0E8 428 aa11.58□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CWC15Q9P013 229 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP2-216ENST00000483412 HSP90B2PQ58FF3 399 aa11.58□□□□□ -0.56
CDK5RAP2-216ENST00000483412 ANKRD20A12PQ8NF67 263 aa11.58□□□□□ -0.56
CDK5RAP2-216ENST00000483412 PCF11O94913 1555 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP2-216ENST00000483412 SCAPERQ9BY12 1400 aa11.57□□□□□ -0.56
CDK5RAP2-216ENST00000483412 ZNF608Q9ULD9 1512 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP2-216ENST00000483412 SYNE3Q6ZMZ3 975 aa11.57□□□□□ -0.56
CDK5RAP2-216ENST00000483412 HOOK1Q9UJC3 728 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP2-216ENST00000483412 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
CDK5RAP2-216ENST00000483412 COG3Q96JB2 828 aa11.56□□□□□ -0.56
CDK5RAP2-216ENST00000483412 TSPY26PQ9H489 355 aa11.56□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CNTLNQ9NXG0 1405 aa11.55□□□□□ -0.56
CDK5RAP2-216ENST00000483412 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CCDC73Q6ZRK6 1079 aa11.55□□□□□ -0.56
CDK5RAP2-216ENST00000483412 DAPK1P53355 1430 aa11.55□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CPLX1O14810 134 aa11.55□□□□□ -0.56
CDK5RAP2-216ENST00000483412 APPP05067 770 aa11.54□□□□□ -0.56
CDK5RAP2-216ENST00000483412 IFIT2P09913 472 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-216ENST00000483412 RRP12Q5JTH9 1297 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-216ENST00000483412 PLB1Q6P1J6 1458 aa11.54□□□□□ -0.56
CDK5RAP2-216ENST00000483412 ROCK1Q13464 1354 aa11.54□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CDC45O75419 566 aa11.54□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CPLX2Q6PUV4 134 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-216ENST00000483412 RNF20Q5VTR2 975 aa11.54□□□□□ -0.56
CDK5RAP2-216ENST00000483412 PDILTQ8N807 584 aa11.54□□□□□ -0.56
CDK5RAP2-216ENST00000483412 RAPGEF3O95398 923 aa11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 API5Q9BZZ5 524 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CCDC7Q96M83 1385 aa11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 H0YHG0 523 aa11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 NAP1L1P55209 391 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 PRPF40AO75400 957 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CDR1P51861 262 aa11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 RIPK4P57078 832 aa11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CCDC47Q96A33 483 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 LETM1O95202 739 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 CCDC27Q2M243 656 aa11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 NECTIN2Q92692 538 aa11.53□□□□□ -0.56
CDK5RAP2-216ENST00000483412 ARHGEF11O15085 1522 aa11.52□□□□□ -0.56
CDK5RAP2-216ENST00000483412 WWC1Q8IX03 1113 aa11.52□□□□□ -0.56
CDK5RAP2-216ENST00000483412 TRIM5Q9C035 493 aa11.52□□□□□ -0.56
CDK5RAP2-216ENST00000483412 TMEM132EQ6IEE7 984 aa11.52□□□□□ -0.57
CDK5RAP2-216ENST00000483412 NAT10Q9H0A0 1025 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP2-216ENST00000483412 UQCRHLA0A096LP55 91 aa11.52□□□□□ -0.57
CDK5RAP2-216ENST00000483412 UQCRHP07919 91 aa11.52□□□□□ -0.57
CDK5RAP2-216ENST00000483412 RDXP35241 583 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP2-216ENST00000483412 HFM1A2PYH4 1435 aa11.51□□□□□ -0.57
CDK5RAP2-216ENST00000483412 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
CDK5RAP2-216ENST00000483412 C9orf78Q9NZ63 289 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP2-216ENST00000483412 KIF7Q2M1P5 1343 aa11.51□□□□□ -0.57
CDK5RAP2-216ENST00000483412 EIF2S2P20042 333 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP2-216ENST00000483412 HMGN5P82970 282 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP2-216ENST00000483412 SPC24Q8NBT2 197 aa11.51□□□□□ -0.57
CDK5RAP2-216ENST00000483412 CAGE1Q8TC20 777 aa11.51□□□□□ -0.57
CDK5RAP2-216ENST00000483412 TTLL5Q6EMB2 1281 aa11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 OLFM4Q6UX06 510 aa11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 TMX4Q9H1E5 349 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 GRPEL1Q9HAV7 217 aa11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 KIAA1107Q9UPP5 1409 aa11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 LEKR1Q6ZMV7 388 aa11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 LRRFIP1Q32MZ4 808 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 ERCC4Q92889 916 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 MBD3O95983 291 aa11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP2-216ENST00000483412 SMC2O95347 1197 aa11.49□□□□□ -0.57
CDK5RAP2-216ENST00000483412 FBXO3Q9UK99 471 aa11.49□□□□□ -0.57
CDK5RAP2-216ENST00000483412 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP2-216ENST00000483412 DIAPH1O60610 1272 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP2-216ENST00000483412 CFAP70Q5T0N1 1121 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms