RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 RAPGEF2Q9Y4G8 1499 aa5.35□□□□□ -1.55
SMC6-208ENST00000481708 UBR1Q8IWV7 1749 aa5.35□□□□□ -1.55
SMC6-208ENST00000481708 TMC2Q8TDI7 906 aa5.35□□□□□ -1.55
SMC6-208ENST00000481708 COLQQ9Y215 455 aaPredicted RBP5.35□□□□□ -1.55
SMC6-208ENST00000481708 PTPRMP28827 1452 aa5.34□□□□□ -1.55
SMC6-208ENST00000481708 IER5LQ5T953 404 aa5.34□□□□□ -1.55
SMC6-208ENST00000481708 TMCO4Q5TGY1 634 aa5.34□□□□□ -1.55
SMC6-208ENST00000481708 REPIN1Q9BWE0 567 aaKnown RBP5.34□□□□□ -1.55
SMC6-208ENST00000481708 MARF1Q9Y4F3 1742 aaKnown RBP5.34□□□□□ -1.55
SMC6-208ENST00000481708 UNCXA6NJT0 531 aa5.34□□□□□ -1.55
SMC6-208ENST00000481708 SHPRHQ149N8 1683 aa5.34□□□□□ -1.55
SMC6-208ENST00000481708 FECHP22830 423 aa5.34□□□□□ -1.56
SMC6-208ENST00000481708 POTEFA5A3E0 1075 aa5.33□□□□□ -1.56
SMC6-208ENST00000481708 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.33□□□□□ -1.56
SMC6-208ENST00000481708 CRYBG1Q9Y4K1 1723 aa5.33□□□□□ -1.56
SMC6-208ENST00000481708 MS4A1P11836 297 aa5.33□□□□□ -1.56
SMC6-208ENST00000481708 FLIIQ13045 1269 aa5.33□□□□□ -1.56
SMC6-208ENST00000481708 PLSCR2Q9NRY7 297 aa5.33□□□□□ -1.56
SMC6-208ENST00000481708 SPATA31D1Q6ZQQ2 1576 aa5.33□□□□□ -1.56
SMC6-208ENST00000481708 GABBR2O75899 941 aa5.33□□□□□ -1.56
SMC6-208ENST00000481708 CLCN6P51797 869 aa5.33□□□□□ -1.56
SMC6-208ENST00000481708 OXER1Q8TDS5 423 aa5.33□□□□□ -1.56
SMC6-208ENST00000481708 COL22A1Q8NFW1 1626 aaPredicted RBP5.33□□□□□ -1.56
SMC6-208ENST00000481708 SPHKAPQ2M3C7 1700 aa5.32□□□□□ -1.56
SMC6-208ENST00000481708 NPATQ14207 1427 aa5.32□□□□□ -1.56
SMC6-208ENST00000481708 ATP10BO94823 1461 aa5.32□□□□□ -1.56
SMC6-208ENST00000481708 NCOA2Q15596 1464 aa5.32□□□□□ -1.56
SMC6-208ENST00000481708 SUPT6HQ7KZ85 1726 aaKnown RBP5.32□□□□□ -1.56
SMC6-208ENST00000481708 TDRD9Q8NDG6 1382 aaKnown RBP5.32□□□□□ -1.56
SMC6-208ENST00000481708 ZFYVE16Q7Z3T8 1539 aa5.32□□□□□ -1.56
SMC6-208ENST00000481708 SAMD9LQ8IVG5 1584 aa5.32□□□□□ -1.56
SMC6-208ENST00000481708 MAP3K1Q13233 1512 aa5.31□□□□□ -1.56
SMC6-208ENST00000481708 LMTK2Q8IWU2 1503 aa5.31□□□□□ -1.56
SMC6-208ENST00000481708 PROSER2Q86WR7 435 aaPredicted RBP5.31□□□□□ -1.56
SMC6-208ENST00000481708 KRI1Q8N9T8 703 aaKnown RBP5.31□□□□□ -1.56
SMC6-208ENST00000481708 SPDYE16A6NNV3 312 aaPredicted RBP5.31□□□□□ -1.56
SMC6-208ENST00000481708 IGSF5Q9NSI5 407 aa5.31□□□□□ -1.56
SMC6-208ENST00000481708 DNMT1P26358 1616 aaKnown RBP5.31□□□□□ -1.56
SMC6-208ENST00000481708 EFCAB6Q5THR3 1501 aa5.31□□□□□ -1.56
SMC6-208ENST00000481708 CCDC102AQ96A19 550 aa5.31□□□□□ -1.56
SMC6-208ENST00000481708 IFT172Q9UG01 1749 aa5.3□□□□□ -1.56
SMC6-208ENST00000481708 UPF1Q92900 1129 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMC6-208ENST00000481708 DIP2AQ14689 1571 aa5.3□□□□□ -1.56
SMC6-208ENST00000481708 ZNF518AQ6AHZ1 1483 aa5.3□□□□□ -1.56
SMC6-208ENST00000481708 RGPD3A6NKT7 1758 aaPredicted RBP5.3□□□□□ -1.56
SMC6-208ENST00000481708 RGPD4Q7Z3J3 1758 aa5.3□□□□□ -1.56
SMC6-208ENST00000481708 PLCG2P16885 1265 aa5.3□□□□□ -1.56
SMC6-208ENST00000481708 PRIM1P49642 420 aaKnown RBP5.3□□□□□ -1.56
SMC6-208ENST00000481708 POGZQ7Z3K3 1410 aa5.3□□□□□ -1.56
SMC6-208ENST00000481708 PUS7Q96PZ0 661 aaKnown RBP5.29□□□□□ -1.56
SMC6-208ENST00000481708 TMEM131LA2VDJ0 1609 aa5.29□□□□□ -1.56
SMC6-208ENST00000481708 AMHR2Q16671 573 aa5.29□□□□□ -1.56
SMC6-208ENST00000481708 KIF27Q86VH2 1401 aa5.29□□□□□ -1.56
SMC6-208ENST00000481708 GRXCR2A6NFK2 248 aa5.29□□□□□ -1.56
SMC6-208ENST00000481708 OSBPP22059 807 aa5.29□□□□□ -1.56
SMC6-208ENST00000481708 TET3O43151 1660 aa5.29□□□□□ -1.56
SMC6-208ENST00000481708 GCC2Q8IWJ2 1684 aa5.28□□□□□ -1.56
SMC6-208ENST00000481708 NHSL1Q5SYE7 1610 aa5.28□□□□□ -1.56
SMC6-208ENST00000481708 PRDM15P57071 1507 aaPredicted RBP5.28□□□□□ -1.56
SMC6-208ENST00000481708 CHD2O14647 1828 aaKnown RBP5.28□□□□□ -1.56
SMC6-208ENST00000481708 POTEIP0CG38 1075 aa5.27□□□□□ -1.57
SMC6-208ENST00000481708 MAP3K9P80192 1104 aa5.27□□□□□ -1.57
SMC6-208ENST00000481708 IQGAP1P46940 1657 aa5.27□□□□□ -1.57
SMC6-208ENST00000481708 SETD1BQ9UPS6 1966 aaKnown RBP5.27□□□□□ -1.57
SMC6-208ENST00000481708 GOPCQ9HD26 462 aa5.27□□□□□ -1.57
SMC6-208ENST00000481708 SLIT1O75093 1534 aa5.27□□□□□ -1.57
SMC6-208ENST00000481708 USP54Q70EL1 1684 aa5.27□□□□□ -1.57
SMC6-208ENST00000481708 DDX12PQ92771 950 aa5.27□□□□□ -1.57
SMC6-208ENST00000481708 DDRGK1Q96HY6 314 aa5.26□□□□□ -1.57
SMC6-208ENST00000481708 KNDC1Q76NI1 1749 aa5.26□□□□□ -1.57
SMC6-208ENST00000481708 L3MBTL3Q96JM7 780 aaPredicted RBP5.26□□□□□ -1.57
SMC6-208ENST00000481708 CD109Q6YHK3 1445 aa5.26□□□□□ -1.57
SMC6-208ENST00000481708 LRP5O75197 1615 aa5.26□□□□□ -1.57
SMC6-208ENST00000481708 CAMSAP1Q5T5Y3 1602 aa5.26□□□□□ -1.57
SMC6-208ENST00000481708 SEC24BO95487 1268 aa5.26□□□□□ -1.57
SMC6-208ENST00000481708 CLTCQ00610 1675 aaKnown RBP5.26□□□□□ -1.57
SMC6-208ENST00000481708 EEA1Q15075 1411 aa5.25□□□□□ -1.57
SMC6-208ENST00000481708 G3V3G9 751 aa5.25□□□□□ -1.57
SMC6-208ENST00000481708 PTGER2P43116 358 aa5.25□□□□□ -1.57
SMC6-208ENST00000481708 COG6Q9Y2V7 657 aa5.25□□□□□ -1.57
SMC6-208ENST00000481708 XRN1Q8IZH2 1706 aaKnown RBP5.25□□□□□ -1.57
SMC6-208ENST00000481708 CPS1P31327 1500 aa5.25□□□□□ -1.57
SMC6-208ENST00000481708 DHX37Q8IY37 1157 aaKnown RBP5.25□□□□□ -1.57
SMC6-208ENST00000481708 FAM177A1Q8N128 213 aaPredicted RBP5.25□□□□□ -1.57
SMC6-208ENST00000481708 HSP90B1P14625 803 aaKnown RBP5.25□□□□□ -1.57
SMC6-208ENST00000481708 DCBLD2Q96PD2 775 aa5.25□□□□□ -1.57
SMC6-208ENST00000481708 UNC13BO14795 1591 aa5.25□□□□□ -1.57
SMC6-208ENST00000481708 ARHGAP23Q9P227 1491 aa5.24□□□□□ -1.57
SMC6-208ENST00000481708 IRF6O14896 467 aa5.24□□□□□ -1.57
SMC6-208ENST00000481708 CDK11BP21127 795 aaKnown RBP5.24□□□□□ -1.57
SMC6-208ENST00000481708 CDK11AQ9UQ88 783 aaPredicted RBP5.24□□□□□ -1.57
SMC6-208ENST00000481708 ABCA3Q99758 1704 aa5.24□□□□□ -1.57
SMC6-208ENST00000481708 TIAM1Q13009 1591 aa5.24□□□□□ -1.57
SMC6-208ENST00000481708 NUTM2FA1L443 756 aa5.24□□□□□ -1.57
SMC6-208ENST00000481708 METRNQ9UJH8 293 aa5.24□□□□□ -1.57
SMC6-208ENST00000481708 EVI5O60447 810 aa5.23□□□□□ -1.57
SMC6-208ENST00000481708 PROCA1Q8NCQ7 364 aaPredicted RBP5.23□□□□□ -1.57
SMC6-208ENST00000481708 SLC39A7Q92504 469 aa5.23□□□□□ -1.57
SMC6-208ENST00000481708 SERPINA10Q9UK55 444 aa5.23□□□□□ -1.57
SMC6-208ENST00000481708 NCOA1Q15788 1441 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms