RNA–Protein interactions for RNA: ENST00000481590.1

TRBV8-1-201, Transcript of T cell receptor beta variable 8-1 (pseudogene), humanhuman

BASIC

Gene TRBV8-1, Length 279 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV8-1-201ENST00000481590 USP35Q9P2H5 1018 aa9.54□□□□□ -0.88
TRBV8-1-201ENST00000481590 GCGRP47871 477 aa9.53□□□□□ -0.88
TRBV8-1-201ENST00000481590 ATP9BO43861 1147 aa9.52□□□□□ -0.89
TRBV8-1-201ENST00000481590 EIF4G2P78344 907 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRBV8-1-201ENST00000481590 PACS2Q86VP3 889 aa9.52□□□□□ -0.89
TRBV8-1-201ENST00000481590 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
TRBV8-1-201ENST00000481590 SLC39A7Q92504 469 aa9.51□□□□□ -0.89
TRBV8-1-201ENST00000481590 TSC1Q92574 1164 aa9.51□□□□□ -0.89
TRBV8-1-201ENST00000481590 TATDN2Q93075 761 aa9.51□□□□□ -0.89
TRBV8-1-201ENST00000481590 TSKSQ9UJT2 592 aa9.51□□□□□ -0.89
TRBV8-1-201ENST00000481590 UNCXA6NJT0 531 aa9.5□□□□□ -0.89
TRBV8-1-201ENST00000481590 TBC1D9Q6ZT07 1266 aa9.5□□□□□ -0.89
TRBV8-1-201ENST00000481590 PNMA3Q9UL41 463 aa9.5□□□□□ -0.89
TRBV8-1-201ENST00000481590 PCDHGC3Q9UN70 934 aa9.5□□□□□ -0.89
TRBV8-1-201ENST00000481590 C7P10643 843 aa9.49□□□□□ -0.89
TRBV8-1-201ENST00000481590 TXNDC2Q86VQ3 553 aa9.49□□□□□ -0.89
TRBV8-1-201ENST00000481590 SLF2Q8IX21 1173 aa9.49□□□□□ -0.89
TRBV8-1-201ENST00000481590 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.49□□□□□ -0.89
TRBV8-1-201ENST00000481590 PPP1R3GB7ZBB8 358 aa9.47□□□□□ -0.89
TRBV8-1-201ENST00000481590 COL9A1P20849 921 aa9.47□□□□□ -0.89
TRBV8-1-201ENST00000481590 ARID4AP29374 1257 aaPredicted RBP9.47□□□□□ -0.89
TRBV8-1-201ENST00000481590 IGSF5Q9NSI5 407 aa9.47□□□□□ -0.89
TRBV8-1-201ENST00000481590 HSP90B1P14625 803 aaKnown RBP9.46□□□□□ -0.9
TRBV8-1-201ENST00000481590 GRIPAP1Q4V328 841 aa9.46□□□□□ -0.9
TRBV8-1-201ENST00000481590 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.9
TRBV8-1-201ENST00000481590 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.9
TRBV8-1-201ENST00000481590 BCL2L12Q9HB09 334 aa9.46□□□□□ -0.9
TRBV8-1-201ENST00000481590 PSDA5PKW4 1024 aaPredicted RBP9.45□□□□□ -0.9
TRBV8-1-201ENST00000481590 TRIM6-TRIM34B2RNG4 842 aa9.45□□□□□ -0.9
TRBV8-1-201ENST00000481590 CFAP99D6REC4 459 aa9.45□□□□□ -0.9
TRBV8-1-201ENST00000481590 NUDT7P0C024 238 aa9.45□□□□□ -0.9
TRBV8-1-201ENST00000481590 PPP4R3BQ5MIZ7 849 aa9.45□□□□□ -0.9
TRBV8-1-201ENST00000481590 TMEM164Q5U3C3 297 aa9.45□□□□□ -0.9
TRBV8-1-201ENST00000481590 EPS8L1Q8TE68 723 aa9.45□□□□□ -0.9
TRBV8-1-201ENST00000481590 SIRT1Q96EB6 747 aa9.45□□□□□ -0.9
TRBV8-1-201ENST00000481590 C6orf229H3BNL8 230 aa9.44□□□□□ -0.9
TRBV8-1-201ENST00000481590 PTPREP23469 700 aa9.44□□□□□ -0.9
TRBV8-1-201ENST00000481590 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
TRBV8-1-201ENST00000481590 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
TRBV8-1-201ENST00000481590 GUCA2AQ02747 115 aa9.43□□□□□ -0.9
TRBV8-1-201ENST00000481590 NR6A1Q15406 480 aa9.43□□□□□ -0.9
TRBV8-1-201ENST00000481590 PUS7Q96PZ0 661 aaKnown RBP9.43□□□□□ -0.9
TRBV8-1-201ENST00000481590 NOVA2Q9UNW9 492 aaKnown RBP9.43□□□□□ -0.9
TRBV8-1-201ENST00000481590 POTEFA5A3E0 1075 aa9.42□□□□□ -0.9
TRBV8-1-201ENST00000481590 DNAJC14Q6Y2X3 702 aaPredicted RBP9.42□□□□□ -0.9
TRBV8-1-201ENST00000481590 MRRFQ96E11 262 aaKnown RBP9.42□□□□□ -0.9
TRBV8-1-201ENST00000481590 DCBLD2Q96PD2 775 aa9.42□□□□□ -0.9
TRBV8-1-201ENST00000481590 ZMIZ1Q9ULJ6 1067 aa9.42□□□□□ -0.9
TRBV8-1-201ENST00000481590 RIMBP2O15034 1052 aa9.41□□□□□ -0.9
TRBV8-1-201ENST00000481590 SSFA2P28290 1259 aa9.41□□□□□ -0.9
TRBV8-1-201ENST00000481590 NR1H3Q13133 447 aa9.41□□□□□ -0.9
TRBV8-1-201ENST00000481590 DOK7Q18PE1 504 aa9.41□□□□□ -0.9
TRBV8-1-201ENST00000481590 PHLDB3Q6NSJ2 640 aa9.41□□□□□ -0.9
TRBV8-1-201ENST00000481590 STK32AQ8WU08 396 aa9.41□□□□□ -0.9
TRBV8-1-201ENST00000481590 ZSWIM6Q9HCJ5 1215 aa9.41□□□□□ -0.9
TRBV8-1-201ENST00000481590 SLC4A3P48751 1232 aa9.4□□□□□ -0.9
TRBV8-1-201ENST00000481590 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
TRBV8-1-201ENST00000481590 HLA-CQ95604 372 aa9.4□□□□□ -0.9
TRBV8-1-201ENST00000481590 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
TRBV8-1-201ENST00000481590 ARSIQ5FYB1 569 aa9.39□□□□□ -0.91
TRBV8-1-201ENST00000481590 LHX8Q68G74 356 aa9.39□□□□□ -0.91
TRBV8-1-201ENST00000481590 KIAA1522Q9P206 1035 aaPredicted RBP9.39□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
TRBV8-1-201ENST00000481590 SLC10A3P09131 477 aa9.38□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L2Q6R6M4 530 aa9.38□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
TRBV8-1-201ENST00000481590 BCL2L13Q9BXK5 485 aa9.38□□□□□ -0.91
TRBV8-1-201ENST00000481590 METRNQ9UJH8 293 aa9.38□□□□□ -0.91
TRBV8-1-201ENST00000481590 SOWAHDA6NJG2 315 aa9.37□□□□□ -0.91
TRBV8-1-201ENST00000481590 SMAPO00193 183 aa9.37□□□□□ -0.91
TRBV8-1-201ENST00000481590 ZNF16P17020 682 aaPredicted RBP9.37□□□□□ -0.91
TRBV8-1-201ENST00000481590 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
TRBV8-1-201ENST00000481590 MARSP56192 900 aaKnown RBP9.36□□□□□ -0.91
TRBV8-1-201ENST00000481590 DESI1Q6ICB0 168 aa9.36□□□□□ -0.91
TRBV8-1-201ENST00000481590 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
TRBV8-1-201ENST00000481590 KHSRPQ92945 711 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRBV8-1-201ENST00000481590 CLP1Q92989 425 aaKnown RBP9.36□□□□□ -0.91
TRBV8-1-201ENST00000481590 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L5A8MUK1 530 aa9.35□□□□□ -0.91
TRBV8-1-201ENST00000481590 SKIP12755 728 aa9.35□□□□□ -0.91
TRBV8-1-201ENST00000481590 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
TRBV8-1-201ENST00000481590 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
TRBV8-1-201ENST00000481590 ZNF592Q92610 1267 aa9.35□□□□□ -0.91
TRBV8-1-201ENST00000481590 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
TRBV8-1-201ENST00000481590 LHX6Q9UPM6 363 aa9.35□□□□□ -0.91
TRBV8-1-201ENST00000481590 CDK11AQ9UQ88 783 aaPredicted RBP9.35□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L15C9J2P7 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L10C9JJH3 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L13C9JLJ4 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L12C9JPN9 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L11C9JVI0 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L21D6R901 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L18D6R9N7 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L22D6RA61 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L17D6RBQ6 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L19D6RCP7 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L20D6RJB6 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 USP17L24Q0WX57 530 aa9.34□□□□□ -0.91
TRBV8-1-201ENST00000481590 ATP5J2-PTCD1G3V325 749 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms