RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 APLP1P51693 650 aa9.03□□□□□ -0.96
COPA-203ENST00000481040 TMCO4Q5TGY1 634 aa9.03□□□□□ -0.96
COPA-203ENST00000481040 WWC1Q8IX03 1113 aa9.03□□□□□ -0.96
COPA-203ENST00000481040 GDPD2Q9HCC8 539 aa9.03□□□□□ -0.96
COPA-203ENST00000481040 LIMD1Q9UGP4 676 aa9.03□□□□□ -0.96
COPA-203ENST00000481040 MTMR14Q8NCE2 650 aa9.02□□□□□ -0.97
COPA-203ENST00000481040 RGS22Q8NE09 1264 aa9.02□□□□□ -0.97
COPA-203ENST00000481040 GZF1Q9H116 711 aaPredicted RBP9.02□□□□□ -0.97
COPA-203ENST00000481040 RNF40O75150 1001 aa9.01□□□□□ -0.97
COPA-203ENST00000481040 CALR3Q96L12 384 aaKnown RBP9.01□□□□□ -0.97
COPA-203ENST00000481040 MTRQ99707 1265 aa9.01□□□□□ -0.97
COPA-203ENST00000481040 ACIN1Q9UKV3 1341 aaKnown RBP9.01□□□□□ -0.97
COPA-203ENST00000481040 RIC3Q7Z5B4 369 aa9□□□□□ -0.97
COPA-203ENST00000481040 ZNF516Q92618 1163 aa9□□□□□ -0.97
COPA-203ENST00000481040 PDE4CQ08493 712 aa8.99□□□□□ -0.97
COPA-203ENST00000481040 SOCS7O14512 581 aa8.98□□□□□ -0.97
COPA-203ENST00000481040 ABL2P42684 1182 aa8.98□□□□□ -0.97
COPA-203ENST00000481040 MFAP1P55081 439 aaKnown RBP8.98□□□□□ -0.97
COPA-203ENST00000481040 TUSC1Q2TAM9 212 aa8.98□□□□□ -0.97
COPA-203ENST00000481040 SPIRE2Q8WWL2 714 aa8.98□□□□□ -0.97
COPA-203ENST00000481040 PRM3Q9NNZ6 103 aa8.98□□□□□ -0.97
COPA-203ENST00000481040 MTMR7Q9Y216 660 aa8.98□□□□□ -0.97
COPA-203ENST00000481040 GLMNQ92990 594 aa8.97□□□□□ -0.97
COPA-203ENST00000481040 POM121CA8CG34 1229 aa8.96□□□□□ -0.98
COPA-203ENST00000481040 SPTLC1O15269 473 aa8.96□□□□□ -0.98
COPA-203ENST00000481040 NKX2-3Q8TAU0 364 aa8.96□□□□□ -0.98
COPA-203ENST00000481040 RBM46Q8TBY0 533 aaKnown RBP8.96□□□□□ -0.98
COPA-203ENST00000481040 IRX2Q9BZI1 471 aaPredicted RBP8.95□□□□□ -0.98
COPA-203ENST00000481040 IL21Q9HBE4 155 aa8.95□□□□□ -0.98
COPA-203ENST00000481040 TBC1D2BQ9UPU7 963 aa8.95□□□□□ -0.98
COPA-203ENST00000481040 CD46P15529 392 aa8.93□□□□□ -0.98
COPA-203ENST00000481040 CSPP1Q1MSJ5 1256 aa8.93□□□□□ -0.98
COPA-203ENST00000481040 RSBN1LQ6PCB5 846 aaPredicted RBP8.93□□□□□ -0.98
COPA-203ENST00000481040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.92□□□□□ -0.98
COPA-203ENST00000481040 PATL2C9JE40 543 aaKnown RBP8.92□□□□□ -0.98
COPA-203ENST00000481040 AP1G2O75843 785 aa8.92□□□□□ -0.98
COPA-203ENST00000481040 COPS2P61201 443 aa8.92□□□□□ -0.98
COPA-203ENST00000481040 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
COPA-203ENST00000481040 TMEM134Q9H6X4 195 aa8.92□□□□□ -0.98
COPA-203ENST00000481040 RCCD1A6NED2 376 aa8.91□□□□□ -0.98
COPA-203ENST00000481040 HDGFP51858 240 aaKnown RBP8.91□□□□□ -0.98
COPA-203ENST00000481040 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
COPA-203ENST00000481040 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
COPA-203ENST00000481040 PBXIP1Q96AQ6 731 aa8.91□□□□□ -0.98
COPA-203ENST00000481040 MOXD2PA6NHM9 499 aa8.9□□□□□ -0.98
COPA-203ENST00000481040 LILRB3O75022 631 aa8.9□□□□□ -0.98
COPA-203ENST00000481040 DNAJB2P25686 324 aa8.9□□□□□ -0.98
COPA-203ENST00000481040 QPCTQ16769 361 aa8.9□□□□□ -0.98
COPA-203ENST00000481040 FOXD4L5Q5VV16 416 aaPredicted RBP8.9□□□□□ -0.98
COPA-203ENST00000481040 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.98
COPA-203ENST00000481040 GJA5P36382 358 aa8.89□□□□□ -0.99
COPA-203ENST00000481040 SLC10A3P09131 477 aa8.88□□□□□ -0.99
COPA-203ENST00000481040 USP17L8P0C7I0 530 aa8.88□□□□□ -0.99
COPA-203ENST00000481040 KCNA1Q09470 495 aa8.88□□□□□ -0.99
COPA-203ENST00000481040 RTL5Q5HYW3 569 aaPredicted RBP8.88□□□□□ -0.99
COPA-203ENST00000481040 HDGFL1Q5TGJ6 251 aa8.88□□□□□ -0.99
COPA-203ENST00000481040 SULF1Q8IWU6 871 aa8.88□□□□□ -0.99
COPA-203ENST00000481040 LCE2BO14633 110 aa8.87□□□□□ -0.99
COPA-203ENST00000481040 BRD1O95696 1058 aa8.87□□□□□ -0.99
COPA-203ENST00000481040 NDUFV2P19404 249 aa8.87□□□□□ -0.99
COPA-203ENST00000481040 RBM25P49756 843 aaKnown RBP8.87□□□□□ -0.99
COPA-203ENST00000481040 BLOC1S3Q6QNY0 202 aa8.87□□□□□ -0.99
COPA-203ENST00000481040 USTQ9Y2C2 406 aa8.87□□□□□ -0.99
COPA-203ENST00000481040 PCDHB15Q9Y5E8 787 aa8.87□□□□□ -0.99
COPA-203ENST00000481040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.86□□□□□ -0.99
COPA-203ENST00000481040 NUTM2BA6NNL0 878 aaPredicted RBP8.86□□□□□ -0.99
COPA-203ENST00000481040 NUTM2EB1AL46 878 aaPredicted RBP8.86□□□□□ -0.99
COPA-203ENST00000481040 RFX1P22670 979 aa8.86□□□□□ -0.99
COPA-203ENST00000481040 NUTM2DQ5VT03 806 aaPredicted RBP8.86□□□□□ -0.99
COPA-203ENST00000481040 NUTM2AQ8IVF1 878 aaPredicted RBP8.86□□□□□ -0.99
COPA-203ENST00000481040 ADAMTS19Q8TE59 1207 aa8.86□□□□□ -0.99
COPA-203ENST00000481040 NDUFB9Q9Y6M9 179 aa8.86□□□□□ -0.99
COPA-203ENST00000481040 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
COPA-203ENST00000481040 TLL1O43897 1013 aa8.85□□□□□ -0.99
COPA-203ENST00000481040 CSB-PGBD3P0DP91 1061 aa8.85□□□□□ -0.99
COPA-203ENST00000481040 CFAP70Q5T0N1 1121 aa8.85□□□□□ -0.99
COPA-203ENST00000481040 ZNF428Q96B54 188 aa8.85□□□□□ -0.99
COPA-203ENST00000481040 GJD4Q96KN9 370 aaPredicted RBP8.85□□□□□ -0.99
COPA-203ENST00000481040 PRKD2Q9BZL6 878 aa8.85□□□□□ -0.99
COPA-203ENST00000481040 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.85□□□□□ -0.99
COPA-203ENST00000481040 ZPR1O75312 459 aa8.84□□□□□ -0.99
COPA-203ENST00000481040 WASHC4Q2M389 1173 aa8.84□□□□□ -0.99
COPA-203ENST00000481040 CABLES1Q8TDN4 633 aa8.84□□□□□ -0.99
COPA-203ENST00000481040 PCDHB3Q9Y5E6 796 aa8.84□□□□□ -0.99
COPA-203ENST00000481040 CFHP08603 1231 aa8.83□□□□□ -1
COPA-203ENST00000481040 SRPK2P78362 688 aaKnown RBP8.83□□□□□ -1
COPA-203ENST00000481040 PRPF38BQ5VTL8 546 aaKnown RBP8.83□□□□□ -1
COPA-203ENST00000481040 EMID1Q96A84 441 aaPredicted RBP8.82□□□□□ -1
COPA-203ENST00000481040 ACTN4O43707 911 aaKnown RBP8.81□□□□□ -1
COPA-203ENST00000481040 PPP1R12CQ9BZL4 782 aa8.81□□□□□ -1
COPA-203ENST00000481040 ZBTB3Q9H5J0 574 aa8.8□□□□□ -1
COPA-203ENST00000481040 CARNS1A5YM72 827 aa8.78□□□□□ -1
COPA-203ENST00000481040 GPR37L1O60883 481 aa8.78□□□□□ -1
COPA-203ENST00000481040 KDM4AO75164 1064 aa8.78□□□□□ -1
COPA-203ENST00000481040 SLC4A3P48751 1232 aa8.78□□□□□ -1
COPA-203ENST00000481040 VAC14Q08AM6 782 aa8.78□□□□□ -1
COPA-203ENST00000481040 Q6ZNB5 142 aa8.78□□□□□ -1
COPA-203ENST00000481040 PRR14Q9BWN1 585 aa8.78□□□□□ -1
COPA-203ENST00000481040 HMX1Q9NP08 348 aaPredicted RBP8.78□□□□□ -1
COPA-203ENST00000481040 PALM3A6NDB9 673 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms