RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 ABCC11Q96J66 1382 aa22.36■■□□□ 1.17
CDK9-203ENST00000480353 TECPR2O15040 1411 aa22.35■■□□□ 1.17
CDK9-203ENST00000480353 CDC42BPGQ6DT37 1551 aa22.34■■□□□ 1.17
CDK9-203ENST00000480353 NRXN1Q9ULB1 1477 aa22.34■■□□□ 1.17
CDK9-203ENST00000480353 NUTM2BA6NNL0 878 aaPredicted RBP22.33■■□□□ 1.17
CDK9-203ENST00000480353 NUTM2EB1AL46 878 aaPredicted RBP22.33■■□□□ 1.17
CDK9-203ENST00000480353 NUTM2AQ8IVF1 878 aaPredicted RBP22.33■■□□□ 1.17
CDK9-203ENST00000480353 DDX17Q92841 729 aaKnown RBP22.33■■□□□ 1.17
CDK9-203ENST00000480353 ORAI2Q96SN7 254 aa22.32■■□□□ 1.16
CDK9-203ENST00000480353 ESCO1Q5FWF5 840 aa22.31■■□□□ 1.16
CDK9-203ENST00000480353 STAC3Q96MF2 364 aa22.31■■□□□ 1.16
CDK9-203ENST00000480353 NUTM2FA1L443 756 aa22.3■■□□□ 1.16
CDK9-203ENST00000480353 POGKQ9P215 609 aa22.3■■□□□ 1.16
CDK9-203ENST00000480353 RGS17Q9UGC6 210 aaPredicted RBP22.29■■□□□ 1.16
CDK9-203ENST00000480353 PLEKHH1Q9ULM0 1364 aa22.28■■□□□ 1.16
CDK9-203ENST00000480353 SAFB2Q14151 953 aaKnown RBP eCLIP22.28■■□□□ 1.16
CDK9-203ENST00000480353 SIRT1Q96EB6 747 aa22.27■■□□□ 1.16
CDK9-203ENST00000480353 PRAM1Q96QH2 718 aa22.26■■□□□ 1.15
CDK9-203ENST00000480353 LRP6O75581 1613 aa22.26■■□□□ 1.15
CDK9-203ENST00000480353 NPHP3Q7Z494 1330 aa22.25■■□□□ 1.15
CDK9-203ENST00000480353 FMN2Q9NZ56 1722 aa22.24■■□□□ 1.15
CDK9-203ENST00000480353 ZNF772Q68DY9 489 aaPredicted RBP22.24■■□□□ 1.15
CDK9-203ENST00000480353 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
CDK9-203ENST00000480353 POTEAQ6S8J7 498 aa22.23■■□□□ 1.15
CDK9-203ENST00000480353 PNPLA6Q8IY17 1366 aa22.23■■□□□ 1.15
CDK9-203ENST00000480353 DLC1Q96QB1 1528 aa22.21■■□□□ 1.15
CDK9-203ENST00000480353 SOS2Q07890 1332 aaPredicted RBP22.21■■□□□ 1.15
CDK9-203ENST00000480353 FOXO3O43524 673 aa22.2■■□□□ 1.14
CDK9-203ENST00000480353 KIF1AQ12756 1690 aa22.2■■□□□ 1.14
CDK9-203ENST00000480353 C8orf37Q96NL8 207 aa22.19■■□□□ 1.14
CDK9-203ENST00000480353 RGPD8O14715 1765 aaPredicted RBP22.18■■□□□ 1.14
CDK9-203ENST00000480353 ADGRB1O14514 1584 aa22.18■■□□□ 1.14
CDK9-203ENST00000480353 XPCQ01831 940 aaPredicted RBP22.18■■□□□ 1.14
CDK9-203ENST00000480353 ADAMTS2O95450 1211 aa22.16■■□□□ 1.14
CDK9-203ENST00000480353 AFF2P51816 1311 aa22.15■■□□□ 1.14
CDK9-203ENST00000480353 MINK1Q8N4C8 1332 aaPredicted RBP22.15■■□□□ 1.14
CDK9-203ENST00000480353 HIRIP3Q9BW71 556 aaPredicted RBP22.14■■□□□ 1.13
CDK9-203ENST00000480353 PHF8Q9UPP1 1060 aa22.14■■□□□ 1.13
CDK9-203ENST00000480353 EIF3AQ14152 1382 aaKnown RBP22.13■■□□□ 1.13
CDK9-203ENST00000480353 NGLY1Q96IV0 654 aa22.13■■□□□ 1.13
CDK9-203ENST00000480353 KIAA1210Q9ULL0 1709 aa22.12■■□□□ 1.13
CDK9-203ENST00000480353 PXDNQ92626 1479 aa22.12■■□□□ 1.13
CDK9-203ENST00000480353 PSME1Q06323 249 aa22.12■■□□□ 1.13
CDK9-203ENST00000480353 NEUROD1Q13562 356 aa22.11■■□□□ 1.13
CDK9-203ENST00000480353 KRT28Q7Z3Y7 464 aa22.11■■□□□ 1.13
CDK9-203ENST00000480353 ADGRB2O60241 1585 aa22.11■■□□□ 1.13
CDK9-203ENST00000480353 ARHGEF28Q8N1W1 1705 aaKnown RBP22.11■■□□□ 1.13
CDK9-203ENST00000480353 COL22A1Q8NFW1 1626 aaPredicted RBP22.1■■□□□ 1.13
CDK9-203ENST00000480353 RXRBP28702 533 aa22.1■■□□□ 1.13
CDK9-203ENST00000480353 HAP1P54257 671 aaPredicted RBP22.09■■□□□ 1.13
CDK9-203ENST00000480353 ANKARQ7Z5J8 1434 aa22.08■■□□□ 1.13
CDK9-203ENST00000480353 LMOD2Q6P5Q4 547 aa22.08■■□□□ 1.13
CDK9-203ENST00000480353 PMFBP1Q8TBY8 1022 aa22.07■■□□□ 1.12
CDK9-203ENST00000480353 WASLO00401 505 aaPredicted RBP22.06■■□□□ 1.12
CDK9-203ENST00000480353 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
CDK9-203ENST00000480353 QTRT2Q9H974 415 aaKnown RBP22.05■■□□□ 1.12
CDK9-203ENST00000480353 MARF1Q9Y4F3 1742 aaKnown RBP22.04■■□□□ 1.12
CDK9-203ENST00000480353 PLEKHG5O94827 1062 aa22.04■■□□□ 1.12
CDK9-203ENST00000480353 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
CDK9-203ENST00000480353 USP21Q9UK80 565 aa22.04■■□□□ 1.12
CDK9-203ENST00000480353 TULP4Q9NRJ4 1543 aa22.04■■□□□ 1.12
CDK9-203ENST00000480353 SPATA31A3Q5VYP0 1347 aa22.04■■□□□ 1.12
CDK9-203ENST00000480353 USP32Q8NFA0 1604 aa22.03■■□□□ 1.12
CDK9-203ENST00000480353 L3MBTL2Q969R5 705 aa22.03■■□□□ 1.12
CDK9-203ENST00000480353 ITSN1Q15811 1721 aa22.03■■□□□ 1.12
CDK9-203ENST00000480353 GPRASP1Q5JY77 1395 aa22.02■■□□□ 1.12
CDK9-203ENST00000480353 TNS3Q68CZ2 1445 aa22.02■■□□□ 1.12
CDK9-203ENST00000480353 NBPF1Q3BBV0 1214 aa22.01■■□□□ 1.11
CDK9-203ENST00000480353 NGDNQ8NEJ9 315 aaKnown RBP22.01■■□□□ 1.11
CDK9-203ENST00000480353 SBNO1A3KN83 1393 aa21.99■■□□□ 1.11
CDK9-203ENST00000480353 ARHGEF10O15013 1369 aa21.99■■□□□ 1.11
CDK9-203ENST00000480353 RBM6P78332 1123 aaKnown RBP21.99■■□□□ 1.11
CDK9-203ENST00000480353 TRPC5Q9UL62 973 aaPredicted RBP21.99■■□□□ 1.11
CDK9-203ENST00000480353 CDK19Q9BWU1 502 aa21.97■■□□□ 1.11
CDK9-203ENST00000480353 PAK3O75914 559 aaPredicted RBP21.96■■□□□ 1.11
CDK9-203ENST00000480353 NUDT16Q96DE0 195 aaKnown RBP21.96■■□□□ 1.11
CDK9-203ENST00000480353 PRR36Q9H6K5 1346 aa21.96■■□□□ 1.11
CDK9-203ENST00000480353 CENPJQ9HC77 1338 aaPredicted RBP21.96■■□□□ 1.11
CDK9-203ENST00000480353 CDK12Q9NYV4 1490 aaPredicted RBP21.96■■□□□ 1.11
CDK9-203ENST00000480353 FNBP4Q8N3X1 1017 aaPredicted RBP21.95■■□□□ 1.1
CDK9-203ENST00000480353 SRPK2P78362 688 aaKnown RBP21.94■■□□□ 1.1
CDK9-203ENST00000480353 ROCK2O75116 1388 aaKnown RBP21.93■■□□□ 1.1
CDK9-203ENST00000480353 TRPM1Q7Z4N2 1603 aa21.93■■□□□ 1.1
CDK9-203ENST00000480353 CABLES1Q8TDN4 633 aa21.93■■□□□ 1.1
CDK9-203ENST00000480353 QRICH2Q9H0J4 1663 aa21.93■■□□□ 1.1
CDK9-203ENST00000480353 ATP7BP35670 1465 aa21.92■■□□□ 1.1
CDK9-203ENST00000480353 TONSLQ96HA7 1378 aa21.92■■□□□ 1.1
CDK9-203ENST00000480353 TRPM3Q9HCF6 1732 aaPredicted RBP21.91■■□□□ 1.1
CDK9-203ENST00000480353 CCDC61Q9Y6R9 512 aa21.89■■□□□ 1.09
CDK9-203ENST00000480353 ABCA3Q99758 1704 aa21.89■■□□□ 1.09
CDK9-203ENST00000480353 RGS12O14924 1447 aa21.88■■□□□ 1.09
CDK9-203ENST00000480353 ATRNO75882 1429 aa21.88■■□□□ 1.09
CDK9-203ENST00000480353 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.87■■□□□ 1.09
CDK9-203ENST00000480353 UNC5CLQ8IV45 518 aa21.87■■□□□ 1.09
CDK9-203ENST00000480353 ALS2Q96Q42 1657 aa21.87■■□□□ 1.09
CDK9-203ENST00000480353 TOPAZ1Q8N9V7 1692 aa21.86■■□□□ 1.09
CDK9-203ENST00000480353 BCL9LQ86UU0 1499 aa21.85■■□□□ 1.09
CDK9-203ENST00000480353 CCDC9Q9Y3X0 531 aaKnown RBP21.85■■□□□ 1.09
CDK9-203ENST00000480353 PLCH1Q4KWH8 1693 aa21.85■■□□□ 1.09
CDK9-203ENST00000480353 ACEP12821 1306 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms