RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 UBTFL1P0CB47 393 aaPredicted RBP23.74■■□□□ 1.39
ABCA2-217ENST00000479446 HOMER1Q86YM7 354 aa23.74■■□□□ 1.39
ABCA2-217ENST00000479446 CCDC47Q96A33 483 aaKnown RBP23.74■■□□□ 1.39
ABCA2-217ENST00000479446 ARAP1Q96P48 1450 aa23.74■■□□□ 1.39
ABCA2-217ENST00000479446 AMOTL1Q8IY63 956 aa23.74■■□□□ 1.39
ABCA2-217ENST00000479446 TMEM132EQ6IEE7 984 aa23.73■■□□□ 1.39
ABCA2-217ENST00000479446 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
ABCA2-217ENST00000479446 PDZRN3Q9UPQ7 1066 aa23.72■■□□□ 1.39
ABCA2-217ENST00000479446 NASPP49321 788 aaPredicted RBP23.72■■□□□ 1.39
ABCA2-217ENST00000479446 TRAK2O60296 914 aa23.71■■□□□ 1.39
ABCA2-217ENST00000479446 NOL10Q9BSC4 688 aaKnown RBP23.71■■□□□ 1.39
ABCA2-217ENST00000479446 CFAP70Q5T0N1 1121 aa23.71■■□□□ 1.39
ABCA2-217ENST00000479446 GNAI3P08754 354 aa23.71■■□□□ 1.39
ABCA2-217ENST00000479446 NFXL1Q6ZNB6 911 aa23.7■■□□□ 1.38
ABCA2-217ENST00000479446 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.7■■□□□ 1.38
ABCA2-217ENST00000479446 HFM1A2PYH4 1435 aa23.69■■□□□ 1.38
ABCA2-217ENST00000479446 EXOSC9Q06265 439 aaKnown RBP23.69■■□□□ 1.38
ABCA2-217ENST00000479446 ZNF771Q7L3S4 317 aaPredicted RBP23.69■■□□□ 1.38
ABCA2-217ENST00000479446 NINLQ9Y2I6 1382 aa23.69■■□□□ 1.38
ABCA2-217ENST00000479446 PCMTD1Q96MG8 357 aaPredicted RBP23.69■■□□□ 1.38
ABCA2-217ENST00000479446 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
ABCA2-217ENST00000479446 RAPGEF4Q8WZA2 1011 aa23.68■■□□□ 1.38
ABCA2-217ENST00000479446 CCDC39Q9UFE4 941 aa23.68■■□□□ 1.38
ABCA2-217ENST00000479446 SCAPERQ9BY12 1400 aa23.67■■□□□ 1.38
ABCA2-217ENST00000479446 ERICH2A1L162 156 aa23.67■■□□□ 1.38
ABCA2-217ENST00000479446 MBD3O95983 291 aa23.67■■□□□ 1.38
ABCA2-217ENST00000479446 SAFBQ15424 915 aaKnown RBP eCLIP23.67■■□□□ 1.38
ABCA2-217ENST00000479446 PNISRQ8TF01 805 aaKnown RBP23.67■■□□□ 1.38
ABCA2-217ENST00000479446 IFT57Q9NWB7 429 aa23.67■■□□□ 1.38
ABCA2-217ENST00000479446 PSMA5P28066 241 aa23.67■■□□□ 1.38
ABCA2-217ENST00000479446 RALYLQ86SE5 291 aaKnown RBP23.67■■□□□ 1.38
ABCA2-217ENST00000479446 CNTROBQ8N137 903 aa23.67■■□□□ 1.38
ABCA2-217ENST00000479446 GCC1Q96CN9 775 aa23.67■■□□□ 1.38
ABCA2-217ENST00000479446 CFTRP13569 1480 aa23.66■■□□□ 1.38
ABCA2-217ENST00000479446 MCM2P49736 904 aa23.66■■□□□ 1.38
ABCA2-217ENST00000479446 NBPF1Q3BBV0 1214 aa23.66■■□□□ 1.38
ABCA2-217ENST00000479446 RABEP1Q15276 862 aa23.66■■□□□ 1.38
ABCA2-217ENST00000479446 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
ABCA2-217ENST00000479446 CLASRPQ8N2M8 674 aaKnown RBP23.66■■□□□ 1.38
ABCA2-217ENST00000479446 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
ABCA2-217ENST00000479446 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.65■■□□□ 1.38
ABCA2-217ENST00000479446 PRKAR2BP31323 418 aa23.65■■□□□ 1.38
ABCA2-217ENST00000479446 NBPF8Q3BBV2 869 aa23.65■■□□□ 1.38
ABCA2-217ENST00000479446 AKNAQ7Z591 1439 aa23.65■■□□□ 1.38
ABCA2-217ENST00000479446 VPS37DQ86XT2 251 aa23.64■■□□□ 1.38
ABCA2-217ENST00000479446 NEUROD6Q96NK8 337 aa23.64■■□□□ 1.38
ABCA2-217ENST00000479446 BACH2Q9BYV9 841 aa23.64■■□□□ 1.38
ABCA2-217ENST00000479446 SETQ01105 290 aaPredicted RBP23.64■■□□□ 1.38
ABCA2-217ENST00000479446 KIAA1107Q9UPP5 1409 aa23.64■■□□□ 1.37
ABCA2-217ENST00000479446 TEX35Q5T0J7 233 aa23.64■■□□□ 1.37
ABCA2-217ENST00000479446 CCDC30Q5VVM6 783 aa23.64■■□□□ 1.37
ABCA2-217ENST00000479446 NEK4P51957 841 aa23.63■■□□□ 1.37
ABCA2-217ENST00000479446 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
ABCA2-217ENST00000479446 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.378e-10■■■■■ 50.6
ABCA2-217ENST00000479446 SURF6O75683 361 aaKnown RBP23.63■■□□□ 1.37
ABCA2-217ENST00000479446 AIMP1Q12904 312 aaKnown RBP23.62■■□□□ 1.37
ABCA2-217ENST00000479446 TWISTNBQ3B726 338 aaPredicted RBP23.62■■□□□ 1.37
ABCA2-217ENST00000479446 RNF214Q8ND24 703 aa23.62■■□□□ 1.37
ABCA2-217ENST00000479446 GAS2L2Q8NHY3 880 aa23.62■■□□□ 1.37
ABCA2-217ENST00000479446 NAT10Q9H0A0 1025 aaKnown RBP23.62■■□□□ 1.37
ABCA2-217ENST00000479446 FOSBP53539 338 aa23.62■■□□□ 1.37
ABCA2-217ENST00000479446 CAVIN1Q6NZI2 390 aaKnown RBP23.62■■□□□ 1.37
ABCA2-217ENST00000479446 LETM1O95202 739 aaPredicted RBP23.61■■□□□ 1.37
ABCA2-217ENST00000479446 FBXW7Q969H0 707 aa23.61■■□□□ 1.37
ABCA2-217ENST00000479446 BCAR3O75815 825 aa23.61■■□□□ 1.37
ABCA2-217ENST00000479446 NLRP6P59044 892 aa23.61■■□□□ 1.37
ABCA2-217ENST00000479446 SMG6Q86US8 1419 aaKnown RBP23.61■■□□□ 1.37
ABCA2-217ENST00000479446 AFAP1Q8N556 730 aa23.61■■□□□ 1.37
ABCA2-217ENST00000479446 FSD1Q9BTV5 496 aa23.61■■□□□ 1.37
ABCA2-217ENST00000479446 NCAPD3P42695 1498 aa23.61■■□□□ 1.37
ABCA2-217ENST00000479446 WASHC4Q2M389 1173 aa23.61■■□□□ 1.37
ABCA2-217ENST00000479446 MNS1Q8NEH6 495 aa23.6■■□□□ 1.37
ABCA2-217ENST00000479446 SDF4Q9BRK5 362 aa23.6■■□□□ 1.37
ABCA2-217ENST00000479446 ARGLU1Q9NWB6 273 aaPredicted RBP23.6■■□□□ 1.37
ABCA2-217ENST00000479446 CT47B1P0C2W7 299 aaPredicted RBP23.6■■□□□ 1.37
ABCA2-217ENST00000479446 ARHGAP5Q13017 1502 aa23.6■■□□□ 1.37
ABCA2-217ENST00000479446 DHX16O60231 1041 aaKnown RBP23.59■■□□□ 1.37
ABCA2-217ENST00000479446 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
ABCA2-217ENST00000479446 R3HCC1Q9Y3T6 440 aaKnown RBP23.59■■□□□ 1.37
ABCA2-217ENST00000479446 PDCP20941 246 aa23.58■■□□□ 1.37
ABCA2-217ENST00000479446 WDR63Q8IWG1 891 aa23.57■■□□□ 1.36
ABCA2-217ENST00000479446 SYTL4Q96C24 671 aaPredicted RBP23.57■■□□□ 1.36
ABCA2-217ENST00000479446 TSR2Q969E8 191 aaKnown RBP23.57■■□□□ 1.36
ABCA2-217ENST00000479446 PRPF40AO75400 957 aaKnown RBP23.56■■□□□ 1.36
ABCA2-217ENST00000479446 TRIM34Q9BYJ4 488 aa23.56■■□□□ 1.36
ABCA2-217ENST00000479446 NLRP2Q9NX02 1062 aa23.56■■□□□ 1.36
ABCA2-217ENST00000479446 RAD21O60216 631 aa23.56■■□□□ 1.36
ABCA2-217ENST00000479446 HIP1O00291 1037 aa23.55■■□□□ 1.36
ABCA2-217ENST00000479446 OLFM4Q6UX06 510 aa23.55■■□□□ 1.36
ABCA2-217ENST00000479446 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
ABCA2-217ENST00000479446 C1orf115Q9H7X2 142 aa23.55■■□□□ 1.36
ABCA2-217ENST00000479446 GNAI2P04899 355 aa23.55■■□□□ 1.36
ABCA2-217ENST00000479446 MTERF4Q7Z6M4 381 aaKnown RBP23.55■■□□□ 1.36
ABCA2-217ENST00000479446 EFCAB5A4FU69 1503 aa23.55■■□□□ 1.36
ABCA2-217ENST00000479446 EHBP1L1Q8N3D4 1523 aa23.54■■□□□ 1.36
ABCA2-217ENST00000479446 TSPY26PQ9H489 355 aa23.54■■□□□ 1.36
ABCA2-217ENST00000479446 NUTM2GQ5VZR2 741 aa23.54■■□□□ 1.36
ABCA2-217ENST00000479446 MAP7D2Q96T17 732 aa23.54■■□□□ 1.36
ABCA2-217ENST00000479446 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
ABCA2-217ENST00000479446 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms