RNA–Protein interactions for RNA: ENST00000478027.2

RPSA-207, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 1,227 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-207ENST00000478027 MST1RQ04912 1400 aa16.67■□□□□ 0.26
RPSA-207ENST00000478027 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
RPSA-207ENST00000478027 NEUROD1Q13562 356 aa16.66■□□□□ 0.26
RPSA-207ENST00000478027 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
RPSA-207ENST00000478027 L3MBTL2Q969R5 705 aa16.66■□□□□ 0.26
RPSA-207ENST00000478027 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
RPSA-207ENST00000478027 SOCS7O14512 581 aa16.64■□□□□ 0.25
RPSA-207ENST00000478027 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
RPSA-207ENST00000478027 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.25
RPSA-207ENST00000478027 AHDC1Q5TGY3 1603 aaPredicted RBP16.63■□□□□ 0.25
RPSA-207ENST00000478027 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
RPSA-207ENST00000478027 FMN2Q9NZ56 1722 aa16.63■□□□□ 0.25
RPSA-207ENST00000478027 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
RPSA-207ENST00000478027 MED1Q15648 1581 aaPredicted RBP16.62■□□□□ 0.25
RPSA-207ENST00000478027 NHSL1Q5SYE7 1610 aa16.62■□□□□ 0.25
RPSA-207ENST00000478027 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
RPSA-207ENST00000478027 COL16A1Q07092 1604 aaPredicted RBP16.61■□□□□ 0.25
RPSA-207ENST00000478027 BRINP3Q76B58 766 aa16.6■□□□□ 0.25
RPSA-207ENST00000478027 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
RPSA-207ENST00000478027 PRAM1Q96QH2 718 aa16.59■□□□□ 0.25
RPSA-207ENST00000478027 TRAK1Q9UPV9 953 aa16.59■□□□□ 0.25
RPSA-207ENST00000478027 TONSLQ96HA7 1378 aa16.58■□□□□ 0.24
RPSA-207ENST00000478027 RGPD8O14715 1765 aaPredicted RBP16.58■□□□□ 0.24
RPSA-207ENST00000478027 POGKQ9P215 609 aa16.57■□□□□ 0.24
RPSA-207ENST00000478027 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
RPSA-207ENST00000478027 NBPF1Q3BBV0 1214 aa16.56■□□□□ 0.24
RPSA-207ENST00000478027 KIF1AQ12756 1690 aa16.54■□□□□ 0.24
RPSA-207ENST00000478027 SHPRHQ149N8 1683 aa16.54■□□□□ 0.24
RPSA-207ENST00000478027 SAFB2Q14151 953 aaKnown RBP eCLIP16.54■□□□□ 0.24
RPSA-207ENST00000478027 USP32Q8NFA0 1604 aa16.53■□□□□ 0.24
RPSA-207ENST00000478027 ORAI2Q96SN7 254 aa16.52■□□□□ 0.24
RPSA-207ENST00000478027 QRICH2Q9H0J4 1663 aa16.52■□□□□ 0.23
RPSA-207ENST00000478027 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
RPSA-207ENST00000478027 ANKARQ7Z5J8 1434 aa16.51■□□□□ 0.23
RPSA-207ENST00000478027 ROCK2O75116 1388 aaKnown RBP16.51■□□□□ 0.23
RPSA-207ENST00000478027 GPRASP1Q5JY77 1395 aa16.51■□□□□ 0.23
RPSA-207ENST00000478027 JCADQ9P266 1359 aa16.51■□□□□ 0.23
RPSA-207ENST00000478027 MINK1Q8N4C8 1332 aaPredicted RBP16.5■□□□□ 0.23
RPSA-207ENST00000478027 ITSN1Q15811 1721 aa16.5■□□□□ 0.23
RPSA-207ENST00000478027 EIF3AQ14152 1382 aaKnown RBP16.5■□□□□ 0.23
RPSA-207ENST00000478027 TULP4Q9NRJ4 1543 aa16.5■□□□□ 0.23
RPSA-207ENST00000478027 RALGAPBQ86X10 1494 aa16.49■□□□□ 0.23
RPSA-207ENST00000478027 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
RPSA-207ENST00000478027 NUTM2FA1L443 756 aa16.48■□□□□ 0.23
RPSA-207ENST00000478027 HIRIP3Q9BW71 556 aaPredicted RBP16.48■□□□□ 0.23
RPSA-207ENST00000478027 WASLO00401 505 aaPredicted RBP16.47■□□□□ 0.23
RPSA-207ENST00000478027 PXDNQ92626 1479 aa16.47■□□□□ 0.23
RPSA-207ENST00000478027 SOS2Q07890 1332 aaPredicted RBP16.46■□□□□ 0.23
RPSA-207ENST00000478027 NPHP3Q7Z494 1330 aa16.46■□□□□ 0.23
RPSA-207ENST00000478027 CENPJQ9HC77 1338 aaPredicted RBP16.46■□□□□ 0.23
RPSA-207ENST00000478027 DDX17Q92841 729 aaKnown RBP16.46■□□□□ 0.23
RPSA-207ENST00000478027 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
RPSA-207ENST00000478027 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
RPSA-207ENST00000478027 TOPAZ1Q8N9V7 1692 aa16.45■□□□□ 0.22
RPSA-207ENST00000478027 SPATA31A6Q5VVP1 1343 aa16.44■□□□□ 0.22
RPSA-207ENST00000478027 ATP7BP35670 1465 aa16.43■□□□□ 0.22
RPSA-207ENST00000478027 FOXO3O43524 673 aa16.43■□□□□ 0.22
RPSA-207ENST00000478027 CCER1Q8TC90 406 aaPredicted RBP16.43■□□□□ 0.22
RPSA-207ENST00000478027 COL22A1Q8NFW1 1626 aaPredicted RBP16.43■□□□□ 0.22
RPSA-207ENST00000478027 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
RPSA-207ENST00000478027 PHF8Q9UPP1 1060 aa16.42■□□□□ 0.22
RPSA-207ENST00000478027 PRR36Q9H6K5 1346 aa16.42■□□□□ 0.22
RPSA-207ENST00000478027 CARD11Q9BXL7 1154 aa16.41■□□□□ 0.22
RPSA-207ENST00000478027 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
RPSA-207ENST00000478027 LRP6O75581 1613 aa16.4■□□□□ 0.22
RPSA-207ENST00000478027 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
RPSA-207ENST00000478027 SBNO2Q9Y2G9 1366 aa16.38■□□□□ 0.21
RPSA-207ENST00000478027 NUDT16Q96DE0 195 aaKnown RBP16.38■□□□□ 0.21
RPSA-207ENST00000478027 XPCQ01831 940 aaPredicted RBP16.37■□□□□ 0.21
RPSA-207ENST00000478027 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
RPSA-207ENST00000478027 PSME1Q06323 249 aa16.36■□□□□ 0.21
RPSA-207ENST00000478027 KRT28Q7Z3Y7 464 aa16.36■□□□□ 0.21
RPSA-207ENST00000478027 PMFBP1Q8TBY8 1022 aa16.36■□□□□ 0.21
RPSA-207ENST00000478027 RGS17Q9UGC6 210 aaPredicted RBP16.36■□□□□ 0.21
RPSA-207ENST00000478027 EVC2Q86UK5 1308 aa16.36■□□□□ 0.21
RPSA-207ENST00000478027 ALS2Q96Q42 1657 aa16.36■□□□□ 0.21
RPSA-207ENST00000478027 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
RPSA-207ENST00000478027 SBNO1A3KN83 1393 aa16.35■□□□□ 0.21
RPSA-207ENST00000478027 TNS3Q68CZ2 1445 aa16.35■□□□□ 0.21
RPSA-207ENST00000478027 SRPK2P78362 688 aaKnown RBP16.34■□□□□ 0.21
RPSA-207ENST00000478027 CCDC61Q9Y6R9 512 aa16.34■□□□□ 0.21
RPSA-207ENST00000478027 POLR3AO14802 1390 aaPredicted RBP16.34■□□□□ 0.21
RPSA-207ENST00000478027 ABCA3Q99758 1704 aa16.33■□□□□ 0.2
RPSA-207ENST00000478027 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
RPSA-207ENST00000478027 NUTM2BA6NNL0 878 aaPredicted RBP16.32■□□□□ 0.2
RPSA-207ENST00000478027 NUTM2EB1AL46 878 aaPredicted RBP16.32■□□□□ 0.2
RPSA-207ENST00000478027 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
RPSA-207ENST00000478027 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
RPSA-207ENST00000478027 CABP2Q9NPB3 220 aa16.32■□□□□ 0.2
RPSA-207ENST00000478027 ARHGEF10O15013 1369 aa16.31■□□□□ 0.2
RPSA-207ENST00000478027 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
RPSA-207ENST00000478027 MEX3CQ5U5Q3 659 aaKnown RBP16.3■□□□□ 0.2
RPSA-207ENST00000478027 AKAP12Q02952 1782 aa16.3■□□□□ 0.2
RPSA-207ENST00000478027 ACEP12821 1306 aa16.29■□□□□ 0.2
RPSA-207ENST00000478027 CRYBG1Q9Y4K1 1723 aa16.29■□□□□ 0.2
RPSA-207ENST00000478027 ATAD2Q6PL18 1390 aa16.28■□□□□ 0.2
RPSA-207ENST00000478027 USP47Q96K76 1375 aa16.28■□□□□ 0.2
RPSA-207ENST00000478027 ST20-MTHFSA0A0A6YYL1 179 aa16.27■□□□□ 0.2
RPSA-207ENST00000478027 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
RPSA-207ENST00000478027 POTEAQ6S8J7 498 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms