RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TMEM132AQ24JP5 1023 aa5.88□□□□□ -1.47
FNDC3B-209ENST00000478016 TUSC1Q2TAM9 212 aa5.88□□□□□ -1.47
FNDC3B-209ENST00000478016 LIMD1Q9UGP4 676 aa5.88□□□□□ -1.47
FNDC3B-209ENST00000478016 FMNL1O95466 1100 aaPredicted RBP5.87□□□□□ -1.47
FNDC3B-209ENST00000478016 ZNF516Q92618 1163 aa5.87□□□□□ -1.47
FNDC3B-209ENST00000478016 PCMTD1Q96MG8 357 aaPredicted RBP5.87□□□□□ -1.47
FNDC3B-209ENST00000478016 ATP1B4Q9UN42 357 aaPredicted RBP5.87□□□□□ -1.47
FNDC3B-209ENST00000478016 PCDHGC3Q9UN70 934 aa5.87□□□□□ -1.47
FNDC3B-209ENST00000478016 C6orf229H3BNL8 230 aa5.86□□□□□ -1.47
FNDC3B-209ENST00000478016 CSPP1Q1MSJ5 1256 aa5.86□□□□□ -1.47
FNDC3B-209ENST00000478016 PRPF38BQ5VTL8 546 aaKnown RBP5.86□□□□□ -1.47
FNDC3B-209ENST00000478016 BRICD5Q6PL45 260 aa5.86□□□□□ -1.47
FNDC3B-209ENST00000478016 THAP11Q96EK4 314 aa5.86□□□□□ -1.47
FNDC3B-209ENST00000478016 ZBTB3Q9H5J0 574 aa5.86□□□□□ -1.47
FNDC3B-209ENST00000478016 PCDHB15Q9Y5E8 787 aa5.86□□□□□ -1.47
FNDC3B-209ENST00000478016 SPDYE5A6NIY4 337 aa5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 TLL1O43897 1013 aa5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 ADH1BP00325 375 aa5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 MTMR2Q13614 643 aa5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 RNF19BQ6ZMZ0 732 aa5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 RETREG3Q86VR2 466 aa5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 PROCA1Q8NCQ7 364 aaPredicted RBP5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 SPSB2Q99619 263 aa5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 PLA2G2EQ9NZK7 142 aa5.85□□□□□ -1.47
FNDC3B-209ENST00000478016 NUTM2BA6NNL0 878 aaPredicted RBP5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 NUTM2EB1AL46 878 aaPredicted RBP5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 LILRB3O75022 631 aa5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 HRCP23327 699 aa5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 QPCTQ16769 361 aa5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 IFFO2Q5TF58 517 aa5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 NUTM2DQ5VT03 806 aaPredicted RBP5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 NUTM2AQ8IVF1 878 aaPredicted RBP5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 SYMPKQ92797 1274 aaKnown RBP5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 USB1Q9BQ65 265 aaKnown RBP5.84□□□□□ -1.47
FNDC3B-209ENST00000478016 MSS51Q4VC12 460 aa5.83□□□□□ -1.48
FNDC3B-209ENST00000478016 NKX2-3Q8TAU0 364 aa5.83□□□□□ -1.48
FNDC3B-209ENST00000478016 CABLES1Q8TDN4 633 aa5.83□□□□□ -1.48
FNDC3B-209ENST00000478016 EIF5BO60841 1220 aaKnown RBP5.82□□□□□ -1.48
FNDC3B-209ENST00000478016 SLC6A16Q9GZN6 736 aa5.82□□□□□ -1.48
FNDC3B-209ENST00000478016 GGCXP38435 758 aa5.81□□□□□ -1.48
FNDC3B-209ENST00000478016 PPP2R2DQ66LE6 453 aa5.81□□□□□ -1.48
FNDC3B-209ENST00000478016 FAM160A2Q8N612 972 aaPredicted RBP5.81□□□□□ -1.48
FNDC3B-209ENST00000478016 PRR7Q8TB68 274 aa5.81□□□□□ -1.48
FNDC3B-209ENST00000478016 CFAP99D6REC4 459 aa5.8□□□□□ -1.48
FNDC3B-209ENST00000478016 S1PR4O95977 384 aa5.8□□□□□ -1.48
FNDC3B-209ENST00000478016 RTL5Q5HYW3 569 aaPredicted RBP5.8□□□□□ -1.48
FNDC3B-209ENST00000478016 DESI1Q6ICB0 168 aa5.8□□□□□ -1.48
FNDC3B-209ENST00000478016 HELBQ8NG08 1087 aaPredicted RBP5.8□□□□□ -1.48
FNDC3B-209ENST00000478016 DXOO77932 396 aaKnown RBP5.79□□□□□ -1.48
FNDC3B-209ENST00000478016 JUNDP17535 347 aa5.79□□□□□ -1.48
FNDC3B-209ENST00000478016 PRDM9Q9NQV7 894 aa5.79□□□□□ -1.48
FNDC3B-209ENST00000478016 RFC5P40937 340 aa5.78□□□□□ -1.48
FNDC3B-209ENST00000478016 MMP16P51512 607 aa5.78□□□□□ -1.48
FNDC3B-209ENST00000478016 TMEM259Q4ZIN3 620 aa5.78□□□□□ -1.48
FNDC3B-209ENST00000478016 FBXO31Q5XUX0 539 aaPredicted RBP5.78□□□□□ -1.48
FNDC3B-209ENST00000478016 PPP1R18Q6NYC8 613 aa5.78□□□□□ -1.48
FNDC3B-209ENST00000478016 TSC1Q92574 1164 aa5.78□□□□□ -1.48
FNDC3B-209ENST00000478016 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.78□□□□□ -1.48
FNDC3B-209ENST00000478016 GTF3C3Q9Y5Q9 886 aa5.78□□□□□ -1.48
FNDC3B-209ENST00000478016 A0A0G2JS52 829 aa5.77□□□□□ -1.49
FNDC3B-209ENST00000478016 RNF223E7ERA6 249 aa5.76□□□□□ -1.49
FNDC3B-209ENST00000478016 AP1G2O75843 785 aa5.76□□□□□ -1.49
FNDC3B-209ENST00000478016 PTPRNQ16849 979 aa5.76□□□□□ -1.49
FNDC3B-209ENST00000478016 LYPD8Q6UX82 237 aa5.76□□□□□ -1.49
FNDC3B-209ENST00000478016 ANKLE1Q8NAG6 615 aa5.76□□□□□ -1.49
FNDC3B-209ENST00000478016 PODXL2Q9NZ53 605 aa5.76□□□□□ -1.49
FNDC3B-209ENST00000478016 NUDT12Q9BQG2 462 aa5.75□□□□□ -1.49
FNDC3B-209ENST00000478016 FCF1Q9Y324 198 aaKnown RBP5.75□□□□□ -1.49
FNDC3B-209ENST00000478016 PPEF1O14829 653 aaPredicted RBP5.74□□□□□ -1.49
FNDC3B-209ENST00000478016 CCNYL3P0C7X3 344 aa5.74□□□□□ -1.49
FNDC3B-209ENST00000478016 CTDSPL2Q05D32 466 aa5.74□□□□□ -1.49
FNDC3B-209ENST00000478016 BANK1Q8NDB2 785 aa5.74□□□□□ -1.49
FNDC3B-209ENST00000478016 PER1O15534 1290 aaPredicted RBP5.73□□□□□ -1.49
FNDC3B-209ENST00000478016 USP17L8P0C7I0 530 aa5.73□□□□□ -1.49
FNDC3B-209ENST00000478016 CCDC24Q8N4L8 307 aa5.73□□□□□ -1.49
FNDC3B-209ENST00000478016 EVA1BQ9NVM1 165 aa5.73□□□□□ -1.49
FNDC3B-209ENST00000478016 F12P00748 615 aaPredicted RBP5.71□□□□□ -1.5
FNDC3B-209ENST00000478016 CTHP32929 405 aa5.71□□□□□ -1.5
FNDC3B-209ENST00000478016 KCNH2Q12809 1159 aa5.71□□□□□ -1.5
FNDC3B-209ENST00000478016 LRRN4Q8WUT4 740 aa5.71□□□□□ -1.5
FNDC3B-209ENST00000478016 APBB1O00213 710 aa5.7□□□□□ -1.5
FNDC3B-209ENST00000478016 SOCS7O14512 581 aa5.7□□□□□ -1.5
FNDC3B-209ENST00000478016 ZBTB24O43167 697 aaPredicted RBP5.7□□□□□ -1.5
FNDC3B-209ENST00000478016 PLA2G2CQ5R387 149 aa5.7□□□□□ -1.5
FNDC3B-209ENST00000478016 MAP10Q9P2G4 905 aa5.7□□□□□ -1.5
FNDC3B-209ENST00000478016 RGS20O76081 388 aa5.69□□□□□ -1.5
FNDC3B-209ENST00000478016 SLC19A1P41440 591 aa5.69□□□□□ -1.5
FNDC3B-209ENST00000478016 RPIAP49247 311 aa5.69□□□□□ -1.5
FNDC3B-209ENST00000478016 FLIIQ13045 1269 aa5.69□□□□□ -1.5
FNDC3B-209ENST00000478016 MTMR14Q8NCE2 650 aa5.69□□□□□ -1.5
FNDC3B-209ENST00000478016 UNC93B1Q9H1C4 597 aa5.69□□□□□ -1.5
FNDC3B-209ENST00000478016 HMX1Q9NP08 348 aaPredicted RBP5.69□□□□□ -1.5
FNDC3B-209ENST00000478016 SNRKQ9NRH2 765 aa5.69□□□□□ -1.5
FNDC3B-209ENST00000478016 CD2BP2O95400 341 aaKnown RBP5.68□□□□□ -1.5
FNDC3B-209ENST00000478016 MCM6Q14566 821 aa5.68□□□□□ -1.5
FNDC3B-209ENST00000478016 PTCRAQ6ISU1 281 aaPredicted RBP5.68□□□□□ -1.5
FNDC3B-209ENST00000478016 PNMA1Q8ND90 353 aa5.68□□□□□ -1.5
FNDC3B-209ENST00000478016 ARMC2Q8NEN0 867 aa5.68□□□□□ -1.5
FNDC3B-209ENST00000478016 PRKD2Q9BZL6 878 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms