RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 BRICD5Q6PL45 260 aa9.9□□□□□ -0.82
SMNDC1-205ENST00000477763 GUCA2AQ02747 115 aa9.89□□□□□ -0.83
SMNDC1-205ENST00000477763 PPP1R18Q6NYC8 613 aa9.89□□□□□ -0.83
SMNDC1-205ENST00000477763 NKX2-3Q8TAU0 364 aa9.89□□□□□ -0.83
SMNDC1-205ENST00000477763 PCDHGC3Q9UN70 934 aa9.89□□□□□ -0.83
SMNDC1-205ENST00000477763 ADH1BP00325 375 aa9.88□□□□□ -0.83
SMNDC1-205ENST00000477763 PRPF38BQ5VTL8 546 aaKnown RBP9.88□□□□□ -0.83
SMNDC1-205ENST00000477763 SPSB2Q99619 263 aa9.87□□□□□ -0.83
SMNDC1-205ENST00000477763 LIMD1Q9UGP4 676 aa9.87□□□□□ -0.83
SMNDC1-205ENST00000477763 SPDYE5A6NIY4 337 aa9.86□□□□□ -0.83
SMNDC1-205ENST00000477763 RNF19BQ6ZMZ0 732 aa9.86□□□□□ -0.83
SMNDC1-205ENST00000477763 POLR3EQ9NVU0 708 aa9.86□□□□□ -0.83
SMNDC1-205ENST00000477763 TLL1O43897 1013 aa9.85□□□□□ -0.83
SMNDC1-205ENST00000477763 MSS51Q4VC12 460 aa9.85□□□□□ -0.83
SMNDC1-205ENST00000477763 Q6ZNB5 142 aa9.85□□□□□ -0.83
SMNDC1-205ENST00000477763 RETREG3Q86VR2 466 aa9.85□□□□□ -0.83
SMNDC1-205ENST00000477763 USB1Q9BQ65 265 aaKnown RBP9.85□□□□□ -0.83
SMNDC1-205ENST00000477763 PRKD2Q9BZL6 878 aa9.85□□□□□ -0.83
SMNDC1-205ENST00000477763 PCDHB15Q9Y5E8 787 aa9.85□□□□□ -0.83
SMNDC1-205ENST00000477763 LCE2BO14633 110 aa9.84□□□□□ -0.83
SMNDC1-205ENST00000477763 MTMR2Q13614 643 aa9.84□□□□□ -0.83
SMNDC1-205ENST00000477763 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMNDC1-205ENST00000477763 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
SMNDC1-205ENST00000477763 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
SMNDC1-205ENST00000477763 PCMTD1Q96MG8 357 aaPredicted RBP9.83□□□□□ -0.84
SMNDC1-205ENST00000477763 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.83□□□□□ -0.84
SMNDC1-205ENST00000477763 LILRB3O75022 631 aa9.82□□□□□ -0.84
SMNDC1-205ENST00000477763 FAM160A2Q8N612 972 aaPredicted RBP9.82□□□□□ -0.84
SMNDC1-205ENST00000477763 SLC6A16Q9GZN6 736 aa9.82□□□□□ -0.84
SMNDC1-205ENST00000477763 GFRA3O60609 400 aa9.81□□□□□ -0.84
SMNDC1-205ENST00000477763 HRCP23327 699 aa9.81□□□□□ -0.84
SMNDC1-205ENST00000477763 GGCXP38435 758 aa9.81□□□□□ -0.84
SMNDC1-205ENST00000477763 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
SMNDC1-205ENST00000477763 PROCA1Q8NCQ7 364 aaPredicted RBP9.81□□□□□ -0.84
SMNDC1-205ENST00000477763 SYMPKQ92797 1274 aaKnown RBP9.81□□□□□ -0.84
SMNDC1-205ENST00000477763 CSPP1Q1MSJ5 1256 aa9.8□□□□□ -0.84
SMNDC1-205ENST00000477763 PPP2R2DQ66LE6 453 aa9.8□□□□□ -0.84
SMNDC1-205ENST00000477763 QPCTQ16769 361 aa9.79□□□□□ -0.84
SMNDC1-205ENST00000477763 DESI1Q6ICB0 168 aa9.79□□□□□ -0.84
SMNDC1-205ENST00000477763 MMP16P51512 607 aa9.78□□□□□ -0.84
SMNDC1-205ENST00000477763 LAPTM4AQ15012 233 aa9.78□□□□□ -0.84
SMNDC1-205ENST00000477763 CABLES1Q8TDN4 633 aa9.78□□□□□ -0.84
SMNDC1-205ENST00000477763 V9GY48 417 aaPredicted RBP9.78□□□□□ -0.84
SMNDC1-205ENST00000477763 NUTM2BA6NNL0 878 aaPredicted RBP9.77□□□□□ -0.85
SMNDC1-205ENST00000477763 NUTM2EB1AL46 878 aaPredicted RBP9.77□□□□□ -0.85
SMNDC1-205ENST00000477763 DXOO77932 396 aaKnown RBP9.77□□□□□ -0.85
SMNDC1-205ENST00000477763 S1PR4O95977 384 aa9.77□□□□□ -0.85
SMNDC1-205ENST00000477763 NUTM2DQ5VT03 806 aaPredicted RBP9.77□□□□□ -0.85
SMNDC1-205ENST00000477763 NUTM2AQ8IVF1 878 aaPredicted RBP9.77□□□□□ -0.85
SMNDC1-205ENST00000477763 PRR7Q8TB68 274 aa9.77□□□□□ -0.85
SMNDC1-205ENST00000477763 JUNDP17535 347 aa9.76□□□□□ -0.85
SMNDC1-205ENST00000477763 ATP1B4Q9UN42 357 aaPredicted RBP9.76□□□□□ -0.85
SMNDC1-205ENST00000477763 RTL5Q5HYW3 569 aaPredicted RBP9.75□□□□□ -0.85
SMNDC1-205ENST00000477763 PRDM9Q9NQV7 894 aa9.75□□□□□ -0.85
SMNDC1-205ENST00000477763 CFAP99D6REC4 459 aa9.74□□□□□ -0.85
SMNDC1-205ENST00000477763 ANKLE1Q8NAG6 615 aa9.74□□□□□ -0.85
SMNDC1-205ENST00000477763 RNF223E7ERA6 249 aa9.73□□□□□ -0.85
SMNDC1-205ENST00000477763 TRAF7Q6Q0C0 670 aa9.73□□□□□ -0.85
SMNDC1-205ENST00000477763 NRG2O14511 850 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-205ENST00000477763 FBXO31Q5XUX0 539 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-205ENST00000477763 HELBQ8NG08 1087 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-205ENST00000477763 EMID1Q96A84 441 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-205ENST00000477763 RFC5P40937 340 aa9.71□□□□□ -0.86
SMNDC1-205ENST00000477763 PTPRNQ16849 979 aa9.71□□□□□ -0.86
SMNDC1-205ENST00000477763 TMEM259Q4ZIN3 620 aa9.7□□□□□ -0.86
SMNDC1-205ENST00000477763 LYPD8Q6UX82 237 aa9.7□□□□□ -0.86
SMNDC1-205ENST00000477763 FCF1Q9Y324 198 aaKnown RBP9.69□□□□□ -0.86
SMNDC1-205ENST00000477763 PPEF1O14829 653 aaPredicted RBP9.67□□□□□ -0.86
SMNDC1-205ENST00000477763 CCNYL3P0C7X3 344 aa9.67□□□□□ -0.86
SMNDC1-205ENST00000477763 NUDT12Q9BQG2 462 aa9.67□□□□□ -0.86
SMNDC1-205ENST00000477763 TRIM67Q6ZTA4 783 aa9.66□□□□□ -0.86
SMNDC1-205ENST00000477763 TSC1Q92574 1164 aa9.66□□□□□ -0.86
SMNDC1-205ENST00000477763 PDZRN3Q9UPQ7 1066 aa9.66□□□□□ -0.86
SMNDC1-205ENST00000477763 BANK1Q8NDB2 785 aa9.65□□□□□ -0.86
SMNDC1-205ENST00000477763 EVA1BQ9NVM1 165 aa9.65□□□□□ -0.86
SMNDC1-205ENST00000477763 AP1G2O75843 785 aa9.64□□□□□ -0.87
SMNDC1-205ENST00000477763 CTDSPL2Q05D32 466 aa9.64□□□□□ -0.87
SMNDC1-205ENST00000477763 PER1O15534 1290 aaPredicted RBP9.63□□□□□ -0.87
SMNDC1-205ENST00000477763 SLC19A1P41440 591 aa9.63□□□□□ -0.87
SMNDC1-205ENST00000477763 RPIAP49247 311 aa9.63□□□□□ -0.87
SMNDC1-205ENST00000477763 PLA2G2CQ5R387 149 aa9.63□□□□□ -0.87
SMNDC1-205ENST00000477763 SOCS7O14512 581 aa9.62□□□□□ -0.87
SMNDC1-205ENST00000477763 F12P00748 615 aaPredicted RBP9.62□□□□□ -0.87
SMNDC1-205ENST00000477763 USP17L8P0C7I0 530 aa9.62□□□□□ -0.87
SMNDC1-205ENST00000477763 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
SMNDC1-205ENST00000477763 LIAT1Q6ZQX7 453 aa9.62□□□□□ -0.87
SMNDC1-205ENST00000477763 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
SMNDC1-205ENST00000477763 SPRYD7Q5W111 196 aa9.61□□□□□ -0.87
SMNDC1-205ENST00000477763 GTF3C3Q9Y5Q9 886 aa9.61□□□□□ -0.87
SMNDC1-205ENST00000477763 ZBTB24O43167 697 aaPredicted RBP9.6□□□□□ -0.87
SMNDC1-205ENST00000477763 CTHP32929 405 aa9.58□□□□□ -0.88
SMNDC1-205ENST00000477763 PTCRAQ6ISU1 281 aaPredicted RBP9.58□□□□□ -0.88
SMNDC1-205ENST00000477763 LRRN4Q8WUT4 740 aa9.58□□□□□ -0.88
SMNDC1-205ENST00000477763 CD2BP2O95400 341 aaKnown RBP9.57□□□□□ -0.88
SMNDC1-205ENST00000477763 ZNF598Q86UK7 904 aaKnown RBP9.57□□□□□ -0.88
SMNDC1-205ENST00000477763 UNC93B1Q9H1C4 597 aa9.57□□□□□ -0.88
SMNDC1-205ENST00000477763 MAP10Q9P2G4 905 aa9.57□□□□□ -0.88
SMNDC1-205ENST00000477763 TRIM32Q13049 653 aa9.56□□□□□ -0.88
SMNDC1-205ENST00000477763 ARMC2Q8NEN0 867 aa9.56□□□□□ -0.88
SMNDC1-205ENST00000477763 APBB1O00213 710 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms