RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 STK26Q9P289 416 aa21.79■■□□□ 1.08
SEC13-215ENST00000477547 ABCC11Q96J66 1382 aa21.78■■□□□ 1.08
SEC13-215ENST00000477547 ROBO2Q9HCK4 1378 aa21.77■■□□□ 1.08
SEC13-215ENST00000477547 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.07
SEC13-215ENST00000477547 CARD11Q9BXL7 1154 aa21.76■■□□□ 1.07
SEC13-215ENST00000477547 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
SEC13-215ENST00000477547 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.75■■□□□ 1.07
SEC13-215ENST00000477547 TRAK1Q9UPV9 953 aa21.75■■□□□ 1.07
SEC13-215ENST00000477547 PHLPP1O60346 1717 aa21.74■■□□□ 1.07
SEC13-215ENST00000477547 ADGRB2O60241 1585 aa21.73■■□□□ 1.07
SEC13-215ENST00000477547 USP47Q96K76 1375 aa21.71■■□□□ 1.07
SEC13-215ENST00000477547 JCADQ9P266 1359 aa21.71■■□□□ 1.07
SEC13-215ENST00000477547 PLEKHH1Q9ULM0 1364 aa21.71■■□□□ 1.07
SEC13-215ENST00000477547 CDC42BPGQ6DT37 1551 aa21.7■■□□□ 1.06
SEC13-215ENST00000477547 SLAIN2Q9P270 581 aa21.7■■□□□ 1.06
SEC13-215ENST00000477547 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
SEC13-215ENST00000477547 UPF1Q92900 1129 aaKnown RBP eCLIP21.69■■□□□ 1.06
SEC13-215ENST00000477547 MSH6P52701 1360 aa21.68■■□□□ 1.06
SEC13-215ENST00000477547 PRAM1Q96QH2 718 aa21.68■■□□□ 1.06
SEC13-215ENST00000477547 FMN2Q9NZ56 1722 aa21.67■■□□□ 1.06
SEC13-215ENST00000477547 NCOA3Q9Y6Q9 1424 aa21.66■■□□□ 1.06
SEC13-215ENST00000477547 LRP6O75581 1613 aa21.66■■□□□ 1.06
SEC13-215ENST00000477547 POGKQ9P215 609 aa21.66■■□□□ 1.06
SEC13-215ENST00000477547 CENPJQ9HC77 1338 aaPredicted RBP21.66■■□□□ 1.06
SEC13-215ENST00000477547 WAPLQ7Z5K2 1190 aa21.65■■□□□ 1.06
SEC13-215ENST00000477547 SIRT1Q96EB6 747 aa21.65■■□□□ 1.06
SEC13-215ENST00000477547 COL16A1Q07092 1604 aaPredicted RBP21.65■■□□□ 1.06
SEC13-215ENST00000477547 SAFB2Q14151 953 aaKnown RBP eCLIP21.64■■□□□ 1.05
SEC13-215ENST00000477547 C14orf37Q86TY3 774 aa21.64■■□□□ 1.05
SEC13-215ENST00000477547 TULP4Q9NRJ4 1543 aa21.63■■□□□ 1.05
SEC13-215ENST00000477547 MEX3CQ5U5Q3 659 aaKnown RBP21.62■■□□□ 1.05
SEC13-215ENST00000477547 DCCP43146 1447 aa21.62■■□□□ 1.05
SEC13-215ENST00000477547 ITSN1Q15811 1721 aa21.61■■□□□ 1.05
SEC13-215ENST00000477547 SBNO2Q9Y2G9 1366 aa21.6■■□□□ 1.05
SEC13-215ENST00000477547 RGPD8O14715 1765 aaPredicted RBP21.6■■□□□ 1.05
SEC13-215ENST00000477547 MINK1Q8N4C8 1332 aaPredicted RBP21.59■■□□□ 1.05
SEC13-215ENST00000477547 ZNF772Q68DY9 489 aaPredicted RBP21.58■■□□□ 1.05
SEC13-215ENST00000477547 TOPAZ1Q8N9V7 1692 aa21.58■■□□□ 1.04
SEC13-215ENST00000477547 USP32Q8NFA0 1604 aa21.58■■□□□ 1.04
SEC13-215ENST00000477547 SPATA31A6Q5VVP1 1343 aa21.57■■□□□ 1.04
SEC13-215ENST00000477547 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
SEC13-215ENST00000477547 ST20-MTHFSA0A0A6YYL1 179 aa21.55■■□□□ 1.04
SEC13-215ENST00000477547 HIRIP3Q9BW71 556 aaPredicted RBP21.55■■□□□ 1.04
SEC13-215ENST00000477547 HSPA5P11021 654 aaKnown RBP21.55■■□□□ 1.04
SEC13-215ENST00000477547 RXRBP28702 533 aa21.53■■□□□ 1.04
SEC13-215ENST00000477547 C19orf44Q9H6X5 657 aa21.53■■□□□ 1.04
SEC13-215ENST00000477547 MST1RQ04912 1400 aa21.52■■□□□ 1.03
SEC13-215ENST00000477547 SHPRHQ149N8 1683 aa21.51■■□□□ 1.03
SEC13-215ENST00000477547 ATP7BP35670 1465 aa21.51■■□□□ 1.03
SEC13-215ENST00000477547 NUTM2BA6NNL0 878 aaPredicted RBP21.51■■□□□ 1.03
SEC13-215ENST00000477547 NUTM2EB1AL46 878 aaPredicted RBP21.51■■□□□ 1.03
SEC13-215ENST00000477547 NUTM2AQ8IVF1 878 aaPredicted RBP21.51■■□□□ 1.03
SEC13-215ENST00000477547 KIF1AQ12756 1690 aa21.51■■□□□ 1.03
SEC13-215ENST00000477547 ATF3P18847 181 aa21.5■■□□□ 1.03
SEC13-215ENST00000477547 TESK2Q96S53 571 aa21.5■■□□□ 1.03
SEC13-215ENST00000477547 AHDC1Q5TGY3 1603 aaPredicted RBP21.5■■□□□ 1.03
SEC13-215ENST00000477547 MYOM1P52179 1685 aa21.49■■□□□ 1.03
SEC13-215ENST00000477547 ANKARQ7Z5J8 1434 aa21.49■■□□□ 1.03
SEC13-215ENST00000477547 CADPS2Q86UW7 1296 aa21.49■■□□□ 1.03
SEC13-215ENST00000477547 EVC2Q86UK5 1308 aa21.48■■□□□ 1.03
SEC13-215ENST00000477547 WASLO00401 505 aaPredicted RBP21.47■■□□□ 1.03
SEC13-215ENST00000477547 C1orf167Q5SNV9 1468 aa21.46■■□□□ 1.03
SEC13-215ENST00000477547 AFF2P51816 1311 aa21.45■■□□□ 1.02
SEC13-215ENST00000477547 SRPK2P78362 688 aaKnown RBP21.44■■□□□ 1.02
SEC13-215ENST00000477547 TMF1P82094 1093 aa21.44■■□□□ 1.02
SEC13-215ENST00000477547 CDK12Q9NYV4 1490 aaPredicted RBP21.44■■□□□ 1.02
SEC13-215ENST00000477547 NHSL1Q5SYE7 1610 aa21.43■■□□□ 1.02
SEC13-215ENST00000477547 NUTM2FA1L443 756 aa21.43■■□□□ 1.02
SEC13-215ENST00000477547 BRINP3Q76B58 766 aa21.43■■□□□ 1.02
SEC13-215ENST00000477547 CDK19Q9BWU1 502 aa21.43■■□□□ 1.02
SEC13-215ENST00000477547 AKAP12Q02952 1782 aa21.43■■□□□ 1.02
SEC13-215ENST00000477547 SRCAPQ6ZRS2 3230 aa21.42■■□□□ 1.02
SEC13-215ENST00000477547 SLC24A1O60721 1099 aa21.42■■□□□ 1.02
SEC13-215ENST00000477547 ATAD2Q6PL18 1390 aa21.41■■□□□ 1.02
SEC13-215ENST00000477547 PRR36Q9H6K5 1346 aa21.41■■□□□ 1.02
SEC13-215ENST00000477547 CABP2Q9NPB3 220 aa21.4■■□□□ 1.02
SEC13-215ENST00000477547 MON2Q7Z3U7 1717 aa21.39■■□□□ 1.01
SEC13-215ENST00000477547 RGS12O14924 1447 aa21.39■■□□□ 1.01
SEC13-215ENST00000477547 PPIP5K1Q6PFW1 1433 aa21.39■■□□□ 1.01
SEC13-215ENST00000477547 CDCA8Q53HL2 280 aa21.36■■□□□ 1.01
SEC13-215ENST00000477547 NUDT16Q96DE0 195 aaKnown RBP21.36■■□□□ 1.01
SEC13-215ENST00000477547 C8orf37Q96NL8 207 aa21.35■■□□□ 1.01
SEC13-215ENST00000477547 QTRT2Q9H974 415 aaKnown RBP21.35■■□□□ 1.01
SEC13-215ENST00000477547 NRKQ7Z2Y5 1582 aa21.34■■□□□ 1.01
SEC13-215ENST00000477547 ESCO1Q5FWF5 840 aa21.33■■□□□ 1.01
SEC13-215ENST00000477547 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
SEC13-215ENST00000477547 RBM6P78332 1123 aaKnown RBP21.32■■□□□ 1
SEC13-215ENST00000477547 DDX17Q92841 729 aaKnown RBP21.32■■□□□ 1
SEC13-215ENST00000477547 PUS7Q96PZ0 661 aaKnown RBP21.32■■□□□ 1
SEC13-215ENST00000477547 ORAI2Q96SN7 254 aa21.32■■□□□ 1
SEC13-215ENST00000477547 POLR3GLQ9BT43 218 aa21.32■■□□□ 1
SEC13-215ENST00000477547 TRPM3Q9HCF6 1732 aaPredicted RBP21.32■■□□□ 1
SEC13-215ENST00000477547 KIF7Q2M1P5 1343 aa21.32■■□□□ 1
SEC13-215ENST00000477547 CCDC61Q9Y6R9 512 aa21.31■■□□□ 1
SEC13-215ENST00000477547 CCDC7Q96M83 1385 aa21.31■■□□□ 1
SEC13-215ENST00000477547 C11orf95C9JLR9 678 aaPredicted RBP21.3■■□□□ 1
SEC13-215ENST00000477547 PHF8Q9UPP1 1060 aa21.3■■□□□ 1
SEC13-215ENST00000477547 LRRC59Q96AG4 307 aaKnown RBP21.29■■□□□ 1
SEC13-215ENST00000477547 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
SEC13-215ENST00000477547 PXDNQ92626 1479 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms