RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
NSMCE4A-208ENST00000477289 ATP6V1AP38606 617 aa8.66□□□□□ -1.02
NSMCE4A-208ENST00000477289 INSM1Q01101 510 aaPredicted RBP8.66□□□□□ -1.02
NSMCE4A-208ENST00000477289 RDH13Q8NBN7 331 aa8.66□□□□□ -1.02
NSMCE4A-208ENST00000477289 PRDM9Q9NQV7 894 aa8.66□□□□□ -1.02
NSMCE4A-208ENST00000477289 SLC27A5Q9Y2P5 690 aa8.65□□□□□ -1.02
NSMCE4A-208ENST00000477289 DDX11L8A8MPP1 907 aa8.64□□□□□ -1.03
NSMCE4A-208ENST00000477289 ZBTB24O43167 697 aaPredicted RBP8.64□□□□□ -1.03
NSMCE4A-208ENST00000477289 SMPD1P17405 629 aa8.63□□□□□ -1.03
NSMCE4A-208ENST00000477289 LCE2CQ5TA81 110 aa8.63□□□□□ -1.03
NSMCE4A-208ENST00000477289 ATP13A2Q9NQ11 1180 aa8.63□□□□□ -1.03
NSMCE4A-208ENST00000477289 SALL2Q9Y467 1007 aaPredicted RBP8.63□□□□□ -1.03
NSMCE4A-208ENST00000477289 WNT7AO00755 349 aa8.62□□□□□ -1.03
NSMCE4A-208ENST00000477289 SNRPBP14678 240 aaKnown RBP8.62□□□□□ -1.03
NSMCE4A-208ENST00000477289 BRICD5Q6PL45 260 aa8.62□□□□□ -1.03
NSMCE4A-208ENST00000477289 SNIP1Q8TAD8 396 aaKnown RBP8.62□□□□□ -1.03
NSMCE4A-208ENST00000477289 RB1CC1Q8TDY2 1594 aa8.61□□□□□ -1.03
NSMCE4A-208ENST00000477289 TERTO14746 1132 aaKnown RBP8.61□□□□□ -1.03
NSMCE4A-208ENST00000477289 GCGRP47871 477 aa8.61□□□□□ -1.03
NSMCE4A-208ENST00000477289 MAP2K5Q13163 448 aa8.61□□□□□ -1.03
NSMCE4A-208ENST00000477289 NACADO15069 1562 aa8.61□□□□□ -1.03
NSMCE4A-208ENST00000477289 ZCCHC6Q5VYS8 1495 aaKnown RBP8.6□□□□□ -1.03
NSMCE4A-208ENST00000477289 IRF6O14896 467 aa8.59□□□□□ -1.03
NSMCE4A-208ENST00000477289 MSS51Q4VC12 460 aa8.59□□□□□ -1.03
NSMCE4A-208ENST00000477289 RNF19BQ6ZMZ0 732 aa8.59□□□□□ -1.03
NSMCE4A-208ENST00000477289 SULF1Q8IWU6 871 aa8.59□□□□□ -1.03
NSMCE4A-208ENST00000477289 TRIM47Q96LD4 638 aa8.59□□□□□ -1.03
NSMCE4A-208ENST00000477289 J3QL48 77 aa8.58□□□□□ -1.04
NSMCE4A-208ENST00000477289 TRIM32Q13049 653 aa8.58□□□□□ -1.04
NSMCE4A-208ENST00000477289 MRGPRX2Q96LB1 330 aa8.58□□□□□ -1.04
NSMCE4A-208ENST00000477289 SENP2Q9HC62 589 aa8.58□□□□□ -1.04
NSMCE4A-208ENST00000477289 MYO15BQ96JP2 1530 aa8.57□□□□□ -1.04
NSMCE4A-208ENST00000477289 TULP1O00294 542 aaPredicted RBP8.56□□□□□ -1.04
NSMCE4A-208ENST00000477289 MINK1Q8N4C8 1332 aaPredicted RBP8.55□□□□□ -1.04
NSMCE4A-208ENST00000477289 DCAF1Q9Y4B6 1507 aa8.55□□□□□ -1.04
NSMCE4A-208ENST00000477289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.55□□□□□ -1.04
NSMCE4A-208ENST00000477289 HPS1Q92902 700 aa8.55□□□□□ -1.04
NSMCE4A-208ENST00000477289 CD46P15529 392 aa8.54□□□□□ -1.04
NSMCE4A-208ENST00000477289 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
NSMCE4A-208ENST00000477289 MMP16P51512 607 aa8.53□□□□□ -1.04
NSMCE4A-208ENST00000477289 MDM2Q00987 491 aaPredicted RBP8.53□□□□□ -1.04
NSMCE4A-208ENST00000477289 KIFC2Q96AC6 838 aa8.53□□□□□ -1.04
NSMCE4A-208ENST00000477289 GRIPAP1Q4V328 841 aa8.52□□□□□ -1.05
NSMCE4A-208ENST00000477289 REPIN1Q9BWE0 567 aaKnown RBP8.52□□□□□ -1.05
NSMCE4A-208ENST00000477289 Q3C1V9 767 aa8.51□□□□□ -1.05
NSMCE4A-208ENST00000477289 RC3H1Q5TC82 1133 aaKnown RBP8.49□□□□□ -1.05
NSMCE4A-208ENST00000477289 KDM4AO75164 1064 aa8.48□□□□□ -1.05
NSMCE4A-208ENST00000477289 DXOO77932 396 aaKnown RBP8.48□□□□□ -1.05
NSMCE4A-208ENST00000477289 SLC16A10Q8TF71 515 aa8.48□□□□□ -1.05
NSMCE4A-208ENST00000477289 FAM181BA6NEQ2 426 aa8.47□□□□□ -1.05
NSMCE4A-208ENST00000477289 SKOR1P84550 965 aa8.47□□□□□ -1.05
NSMCE4A-208ENST00000477289 CCDC24Q8N4L8 307 aa8.47□□□□□ -1.05
NSMCE4A-208ENST00000477289 HLA-CQ95604 372 aa8.47□□□□□ -1.05
NSMCE4A-208ENST00000477289 USB1Q9BQ65 265 aaKnown RBP8.47□□□□□ -1.05
NSMCE4A-208ENST00000477289 GPCPD1Q9NPB8 672 aa8.46□□□□□ -1.06
NSMCE4A-208ENST00000477289 FAM217BQ9NTX9 383 aaPredicted RBP8.46□□□□□ -1.06
NSMCE4A-208ENST00000477289 NXF1Q9UBU9 619 aaKnown RBP8.46□□□□□ -1.06
NSMCE4A-208ENST00000477289 WNT7BP56706 349 aa8.45□□□□□ -1.06
NSMCE4A-208ENST00000477289 ALDH1A1P00352 501 aa8.44□□□□□ -1.06
NSMCE4A-208ENST00000477289 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
NSMCE4A-208ENST00000477289 CLCN1P35523 988 aa8.44□□□□□ -1.06
NSMCE4A-208ENST00000477289 GMPRP36959 345 aa8.44□□□□□ -1.06
NSMCE4A-208ENST00000477289 BARGINQ6ZT62 677 aa8.44□□□□□ -1.06
NSMCE4A-208ENST00000477289 HOXA2O43364 376 aa8.43□□□□□ -1.06
NSMCE4A-208ENST00000477289 ZMYND10O75800 440 aa8.43□□□□□ -1.06
NSMCE4A-208ENST00000477289 USP46P62068 366 aa8.43□□□□□ -1.06
NSMCE4A-208ENST00000477289 ZSCAN1Q8NBB4 408 aa8.43□□□□□ -1.06
NSMCE4A-208ENST00000477289 GUCA2AQ02747 115 aa8.42□□□□□ -1.06
NSMCE4A-208ENST00000477289 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
NSMCE4A-208ENST00000477289 IRF7Q92985 503 aa8.42□□□□□ -1.06
NSMCE4A-208ENST00000477289 BMP1P13497 986 aa8.41□□□□□ -1.06
NSMCE4A-208ENST00000477289 TRIM46Q7Z4K8 759 aa8.41□□□□□ -1.06
NSMCE4A-208ENST00000477289 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
NSMCE4A-208ENST00000477289 LOC100996750A0A140TA64 210 aa8.39□□□□□ -1.07
NSMCE4A-208ENST00000477289 CAPN5O15484 640 aaPredicted RBP8.39□□□□□ -1.07
NSMCE4A-208ENST00000477289 SIAH2O43255 324 aa8.39□□□□□ -1.07
NSMCE4A-208ENST00000477289 VEGFBP49765 207 aa8.39□□□□□ -1.07
NSMCE4A-208ENST00000477289 KRI1Q8N9T8 703 aaKnown RBP8.39□□□□□ -1.07
NSMCE4A-208ENST00000477289 KRTAP4-6Q9BYQ5 205 aa8.39□□□□□ -1.07
NSMCE4A-208ENST00000477289 H3BM21 787 aa8.38□□□□□ -1.07
NSMCE4A-208ENST00000477289 SYMPKQ92797 1274 aaKnown RBP8.38□□□□□ -1.07
NSMCE4A-208ENST00000477289 SSTR3P32745 418 aaPredicted RBP8.37□□□□□ -1.07
NSMCE4A-208ENST00000477289 AMHR2Q16671 573 aa8.37□□□□□ -1.07
NSMCE4A-208ENST00000477289 EHBP1Q8NDI1 1231 aa8.37□□□□□ -1.07
NSMCE4A-208ENST00000477289 WASF2Q9Y6W5 498 aa8.37□□□□□ -1.07
NSMCE4A-208ENST00000477289 ERBB4Q15303 1308 aa8.36□□□□□ -1.07
NSMCE4A-208ENST00000477289 JUNDP17535 347 aa8.36□□□□□ -1.07
NSMCE4A-208ENST00000477289 NUTM1Q86Y26 1132 aa8.36□□□□□ -1.07
NSMCE4A-208ENST00000477289 PCDHGC3Q9UN70 934 aa8.36□□□□□ -1.07
NSMCE4A-208ENST00000477289 SCRIBQ14160 1630 aa8.36□□□□□ -1.07
NSMCE4A-208ENST00000477289 PTCRAQ6ISU1 281 aaPredicted RBP8.35□□□□□ -1.07
NSMCE4A-208ENST00000477289 SPIRE2Q8WWL2 714 aa8.34□□□□□ -1.07
NSMCE4A-208ENST00000477289 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
NSMCE4A-208ENST00000477289 FDX1P10109 184 aa8.33□□□□□ -1.08
NSMCE4A-208ENST00000477289 TTLL12Q14166 644 aaPredicted RBP8.33□□□□□ -1.08
NSMCE4A-208ENST00000477289 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
NSMCE4A-208ENST00000477289 ZFP42Q96MM3 310 aa8.33□□□□□ -1.08
NSMCE4A-208ENST00000477289 RETREG3Q86VR2 466 aa8.32□□□□□ -1.08
NSMCE4A-208ENST00000477289 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
NSMCE4A-208ENST00000477289 NDUFV2P19404 249 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms