RNA–Protein interactions for RNA: ENST00000475729.5

PHC3-206, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-206ENST00000475729 PRDM9Q9NQV7 894 aa7.62□□□□□ -1.19
PHC3-206ENST00000475729 CLK2P49760 499 aaKnown RBP7.61□□□□□ -1.19
PHC3-206ENST00000475729 QPCTQ16769 361 aa7.61□□□□□ -1.19
PHC3-206ENST00000475729 THAP11Q96EK4 314 aa7.61□□□□□ -1.19
PHC3-206ENST00000475729 SPTLC1O15269 473 aa7.6□□□□□ -1.19
PHC3-206ENST00000475729 FMNL1O95466 1100 aaPredicted RBP7.6□□□□□ -1.19
PHC3-206ENST00000475729 S1PR4O95977 384 aa7.6□□□□□ -1.19
PHC3-206ENST00000475729 BRICD5Q6PL45 260 aa7.6□□□□□ -1.19
PHC3-206ENST00000475729 FAM160A2Q8N612 972 aaPredicted RBP7.59□□□□□ -1.19
PHC3-206ENST00000475729 RSPH6AQ9H0K4 717 aa7.59□□□□□ -1.19
PHC3-206ENST00000475729 ADH1BP00325 375 aa7.58□□□□□ -1.2
PHC3-206ENST00000475729 HRCP23327 699 aa7.58□□□□□ -1.2
PHC3-206ENST00000475729 SKIV2LQ15477 1246 aaKnown RBP7.58□□□□□ -1.2
PHC3-206ENST00000475729 DIXDC1Q155Q3 683 aa7.58□□□□□ -1.2
PHC3-206ENST00000475729 SH3D19Q5HYK7 790 aa7.58□□□□□ -1.2
PHC3-206ENST00000475729 RTL5Q5HYW3 569 aaPredicted RBP7.58□□□□□ -1.2
PHC3-206ENST00000475729 PPP1R18Q6NYC8 613 aa7.58□□□□□ -1.2
PHC3-206ENST00000475729 TSC1Q92574 1164 aa7.58□□□□□ -1.2
PHC3-206ENST00000475729 NUTM2BA6NNL0 878 aaPredicted RBP7.57□□□□□ -1.2
PHC3-206ENST00000475729 NUTM2EB1AL46 878 aaPredicted RBP7.57□□□□□ -1.2
PHC3-206ENST00000475729 NUTM2DQ5VT03 806 aaPredicted RBP7.57□□□□□ -1.2
PHC3-206ENST00000475729 NUTM2AQ8IVF1 878 aaPredicted RBP7.57□□□□□ -1.2
PHC3-206ENST00000475729 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
PHC3-206ENST00000475729 MTMR2Q13614 643 aa7.56□□□□□ -1.2
PHC3-206ENST00000475729 Q3C1V9 767 aa7.56□□□□□ -1.2
PHC3-206ENST00000475729 USB1Q9BQ65 265 aaKnown RBP7.56□□□□□ -1.2
PHC3-206ENST00000475729 CFAP99D6REC4 459 aa7.55□□□□□ -1.2
PHC3-206ENST00000475729 PRR7Q8TB68 274 aa7.55□□□□□ -1.2
PHC3-206ENST00000475729 PCMTD1Q96MG8 357 aaPredicted RBP7.54□□□□□ -1.2
PHC3-206ENST00000475729 ZBTB3Q9H5J0 574 aa7.54□□□□□ -1.2
PHC3-206ENST00000475729 A0A0G2JS52 829 aa7.53□□□□□ -1.2
PHC3-206ENST00000475729 RNF223E7ERA6 249 aa7.53□□□□□ -1.2
PHC3-206ENST00000475729 LILRB3O75022 631 aa7.53□□□□□ -1.2
PHC3-206ENST00000475729 RETREG3Q86VR2 466 aa7.53□□□□□ -1.2
PHC3-206ENST00000475729 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.53□□□□□ -1.2
PHC3-206ENST00000475729 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.53□□□□□ -1.2
PHC3-206ENST00000475729 PLA2G2CQ5R387 149 aa7.52□□□□□ -1.21
PHC3-206ENST00000475729 CCDC24Q8N4L8 307 aa7.52□□□□□ -1.21
PHC3-206ENST00000475729 SALL2Q9Y467 1007 aaPredicted RBP7.52□□□□□ -1.21
PHC3-206ENST00000475729 FCF1Q9Y324 198 aaKnown RBP7.51□□□□□ -1.21
PHC3-206ENST00000475729 PER1O15534 1290 aaPredicted RBP7.5□□□□□ -1.21
PHC3-206ENST00000475729 JUNDP17535 347 aa7.5□□□□□ -1.21
PHC3-206ENST00000475729 MSS51Q4VC12 460 aa7.5□□□□□ -1.21
PHC3-206ENST00000475729 IFFO2Q5TF58 517 aa7.5□□□□□ -1.21
PHC3-206ENST00000475729 AP1G2O75843 785 aa7.49□□□□□ -1.21
PHC3-206ENST00000475729 GJA5P36382 358 aa7.49□□□□□ -1.21
PHC3-206ENST00000475729 CTDSPL2Q05D32 466 aa7.49□□□□□ -1.21
PHC3-206ENST00000475729 DXOO77932 396 aaKnown RBP7.48□□□□□ -1.21
PHC3-206ENST00000475729 GGCXP38435 758 aa7.48□□□□□ -1.21
PHC3-206ENST00000475729 RFC5P40937 340 aa7.48□□□□□ -1.21
PHC3-206ENST00000475729 TUSC1Q2TAM9 212 aa7.48□□□□□ -1.21
PHC3-206ENST00000475729 PRPF38BQ5VTL8 546 aaKnown RBP7.48□□□□□ -1.21
PHC3-206ENST00000475729 EMID1Q96A84 441 aaPredicted RBP7.48□□□□□ -1.21
PHC3-206ENST00000475729 MMP16P51512 607 aa7.47□□□□□ -1.21
PHC3-206ENST00000475729 SPDYE5A6NIY4 337 aa7.46□□□□□ -1.22
PHC3-206ENST00000475729 PTCRAQ6ISU1 281 aaPredicted RBP7.46□□□□□ -1.22
PHC3-206ENST00000475729 LIAT1Q6ZQX7 453 aa7.46□□□□□ -1.22
PHC3-206ENST00000475729 LRRN4Q8WUT4 740 aa7.46□□□□□ -1.22
PHC3-206ENST00000475729 GOPCQ9HD26 462 aa7.46□□□□□ -1.22
PHC3-206ENST00000475729 CTHP32929 405 aa7.45□□□□□ -1.22
PHC3-206ENST00000475729 TMEM132AQ24JP5 1023 aa7.45□□□□□ -1.22
PHC3-206ENST00000475729 PPP2R2DQ66LE6 453 aa7.45□□□□□ -1.22
PHC3-206ENST00000475729 ANKLE1Q8NAG6 615 aa7.45□□□□□ -1.22
PHC3-206ENST00000475729 NUDT12Q9BQG2 462 aa7.45□□□□□ -1.22
PHC3-206ENST00000475729 PRKD2Q9BZL6 878 aa7.45□□□□□ -1.22
PHC3-206ENST00000475729 MAP10Q9P2G4 905 aa7.45□□□□□ -1.22
PHC3-206ENST00000475729 LYPD8Q6UX82 237 aa7.43□□□□□ -1.22
PHC3-206ENST00000475729 HELBQ8NG08 1087 aaPredicted RBP7.43□□□□□ -1.22
PHC3-206ENST00000475729 EPS8L1Q8TE68 723 aa7.43□□□□□ -1.22
PHC3-206ENST00000475729 USP17L8P0C7I0 530 aa7.42□□□□□ -1.22
PHC3-206ENST00000475729 CCNYL3P0C7X3 344 aa7.42□□□□□ -1.22
PHC3-206ENST00000475729 SLC19A1P41440 591 aa7.42□□□□□ -1.22
PHC3-206ENST00000475729 HMX1Q9NP08 348 aaPredicted RBP7.42□□□□□ -1.22
PHC3-206ENST00000475729 PTPRNQ16849 979 aa7.41□□□□□ -1.22
PHC3-206ENST00000475729 LINC01559Q495D7 138 aa7.41□□□□□ -1.22
PHC3-206ENST00000475729 SNRKQ9NRH2 765 aa7.41□□□□□ -1.22
PHC3-206ENST00000475729 ZBTB24O43167 697 aaPredicted RBP7.4□□□□□ -1.22
PHC3-206ENST00000475729 NR6A1Q15406 480 aa7.4□□□□□ -1.22
PHC3-206ENST00000475729 DESI1Q6ICB0 168 aa7.4□□□□□ -1.22
PHC3-206ENST00000475729 EVA1BQ9NVM1 165 aa7.4□□□□□ -1.22
PHC3-206ENST00000475729 KCNH2Q12809 1159 aa7.39□□□□□ -1.23
PHC3-206ENST00000475729 F12P00748 615 aaPredicted RBP7.38□□□□□ -1.23
PHC3-206ENST00000475729 BAP1Q92560 729 aa7.38□□□□□ -1.23
PHC3-206ENST00000475729 UNC93B1Q9H1C4 597 aa7.38□□□□□ -1.23
PHC3-206ENST00000475729 FOXC1Q12948 553 aa7.37□□□□□ -1.23
PHC3-206ENST00000475729 SPRYD7Q5W111 196 aa7.37□□□□□ -1.23
PHC3-206ENST00000475729 SKOR1P84550 965 aa7.36□□□□□ -1.23
PHC3-206ENST00000475729 TRIM32Q13049 653 aa7.36□□□□□ -1.23
PHC3-206ENST00000475729 TMEM259Q4ZIN3 620 aa7.36□□□□□ -1.23
PHC3-206ENST00000475729 ZNF697Q5TEC3 545 aa7.36□□□□□ -1.23
PHC3-206ENST00000475729 TNFRSF10AO00220 468 aa7.35□□□□□ -1.23
PHC3-206ENST00000475729 MTMR14Q8NCE2 650 aa7.34□□□□□ -1.23
PHC3-206ENST00000475729 FOXJ1Q92949 421 aa7.34□□□□□ -1.23
PHC3-206ENST00000475729 TRIM34Q9BYJ4 488 aa7.34□□□□□ -1.23
PHC3-206ENST00000475729 RPIAP49247 311 aa7.33□□□□□ -1.24
PHC3-206ENST00000475729 SH3BP2P78314 561 aa7.33□□□□□ -1.24
PHC3-206ENST00000475729 ZNF598Q86UK7 904 aaKnown RBP7.33□□□□□ -1.24
PHC3-206ENST00000475729 V9GY48 417 aaPredicted RBP7.33□□□□□ -1.24
PHC3-206ENST00000475729 CD2BP2O95400 341 aaKnown RBP7.32□□□□□ -1.24
PHC3-206ENST00000475729 GJD4Q96KN9 370 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms