RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 SWT1Q5T5J6 900 aaKnown RBP8.72□□□□□ -1.01
RPSA-205ENST00000475346 RBM46Q8TBY0 533 aaKnown RBP8.72□□□□□ -1.01
RPSA-205ENST00000475346 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
RPSA-205ENST00000475346 ADGRG1Q9Y653 693 aa8.72□□□□□ -1.01
RPSA-205ENST00000475346 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
RPSA-205ENST00000475346 POM121CA8CG34 1229 aa8.71□□□□□ -1.02
RPSA-205ENST00000475346 FOXD4L5Q5VV16 416 aaPredicted RBP8.71□□□□□ -1.02
RPSA-205ENST00000475346 FOXD4L4Q8WXT5 416 aaPredicted RBP8.71□□□□□ -1.02
RPSA-205ENST00000475346 GLMNQ92990 594 aa8.71□□□□□ -1.02
RPSA-205ENST00000475346 TSR3Q9UJK0 312 aaKnown RBP8.71□□□□□ -1.02
RPSA-205ENST00000475346 CSPP1Q1MSJ5 1256 aa8.7□□□□□ -1.02
RPSA-205ENST00000475346 PPP2R2DQ66LE6 453 aa8.7□□□□□ -1.02
RPSA-205ENST00000475346 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
RPSA-205ENST00000475346 EYA1Q99502 592 aa8.69□□□□□ -1.02
RPSA-205ENST00000475346 TBC1D2BQ9UPU7 963 aa8.69□□□□□ -1.02
RPSA-205ENST00000475346 PRM3Q9NNZ6 103 aa8.68□□□□□ -1.02
RPSA-205ENST00000475346 RCCD1A6NED2 376 aa8.67□□□□□ -1.02
RPSA-205ENST00000475346 DNAJB2P25686 324 aa8.67□□□□□ -1.02
RPSA-205ENST00000475346 RBM25P49756 843 aaKnown RBP8.67□□□□□ -1.02
RPSA-205ENST00000475346 PDE4CQ08493 712 aa8.67□□□□□ -1.02
RPSA-205ENST00000475346 SPIRE2Q8WWL2 714 aa8.67□□□□□ -1.02
RPSA-205ENST00000475346 AP1G2O75843 785 aa8.66□□□□□ -1.02
RPSA-205ENST00000475346 SLC4A3P48751 1232 aa8.66□□□□□ -1.02
RPSA-205ENST00000475346 ZNF428Q96B54 188 aa8.66□□□□□ -1.02
RPSA-205ENST00000475346 SLF2Q8IX21 1173 aa8.65□□□□□ -1.02
RPSA-205ENST00000475346 RFX1P22670 979 aa8.64□□□□□ -1.03
RPSA-205ENST00000475346 QPCTQ16769 361 aa8.64□□□□□ -1.03
RPSA-205ENST00000475346 SPTLC1O15269 473 aa8.63□□□□□ -1.03
RPSA-205ENST00000475346 RSBN1LQ6PCB5 846 aaPredicted RBP8.63□□□□□ -1.03
RPSA-205ENST00000475346 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
RPSA-205ENST00000475346 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.62□□□□□ -1.03
RPSA-205ENST00000475346 PBXIP1Q96AQ6 731 aa8.62□□□□□ -1.03
RPSA-205ENST00000475346 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
RPSA-205ENST00000475346 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
RPSA-205ENST00000475346 USP17L8P0C7I0 530 aa8.61□□□□□ -1.03
RPSA-205ENST00000475346 TUSC1Q2TAM9 212 aa8.61□□□□□ -1.03
RPSA-205ENST00000475346 HDGFL1Q5TGJ6 251 aa8.61□□□□□ -1.03
RPSA-205ENST00000475346 TMEM134Q9H6X4 195 aa8.61□□□□□ -1.03
RPSA-205ENST00000475346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.6□□□□□ -1.03
RPSA-205ENST00000475346 NUTM2BA6NNL0 878 aaPredicted RBP8.6□□□□□ -1.03
RPSA-205ENST00000475346 NUTM2EB1AL46 878 aaPredicted RBP8.6□□□□□ -1.03
RPSA-205ENST00000475346 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
RPSA-205ENST00000475346 CD46P15529 392 aa8.6□□□□□ -1.03
RPSA-205ENST00000475346 NDUFV2P19404 249 aa8.6□□□□□ -1.03
RPSA-205ENST00000475346 APLP1P51693 650 aa8.6□□□□□ -1.03
RPSA-205ENST00000475346 RTL5Q5HYW3 569 aaPredicted RBP8.6□□□□□ -1.03
RPSA-205ENST00000475346 NUTM2DQ5VT03 806 aaPredicted RBP8.6□□□□□ -1.03
RPSA-205ENST00000475346 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
RPSA-205ENST00000475346 NUTM2AQ8IVF1 878 aaPredicted RBP8.6□□□□□ -1.03
RPSA-205ENST00000475346 DDX11L8A8MPP1 907 aa8.59□□□□□ -1.03
RPSA-205ENST00000475346 SOCS7O14512 581 aa8.59□□□□□ -1.03
RPSA-205ENST00000475346 KCNA1Q09470 495 aa8.59□□□□□ -1.03
RPSA-205ENST00000475346 LILRB3O75022 631 aa8.58□□□□□ -1.04
RPSA-205ENST00000475346 BRD1O95696 1058 aa8.58□□□□□ -1.04
RPSA-205ENST00000475346 COPS2P61201 443 aa8.58□□□□□ -1.04
RPSA-205ENST00000475346 RDH13Q8NBN7 331 aa8.58□□□□□ -1.04
RPSA-205ENST00000475346 CABLES1Q8TDN4 633 aa8.58□□□□□ -1.04
RPSA-205ENST00000475346 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
RPSA-205ENST00000475346 NDUFB9Q9Y6M9 179 aa8.58□□□□□ -1.04
RPSA-205ENST00000475346 CARNS1A5YM72 827 aa8.57□□□□□ -1.04
RPSA-205ENST00000475346 KCNC4Q03721 635 aa8.57□□□□□ -1.04
RPSA-205ENST00000475346 SULF1Q8IWU6 871 aa8.57□□□□□ -1.04
RPSA-205ENST00000475346 ADAMTS19Q8TE59 1207 aa8.57□□□□□ -1.04
RPSA-205ENST00000475346 USTQ9Y2C2 406 aa8.57□□□□□ -1.04
RPSA-205ENST00000475346 CFHP08603 1231 aa8.56□□□□□ -1.04
RPSA-205ENST00000475346 CFAP70Q5T0N1 1121 aa8.56□□□□□ -1.04
RPSA-205ENST00000475346 MTRQ99707 1265 aa8.56□□□□□ -1.04
RPSA-205ENST00000475346 SLC10A3P09131 477 aa8.54□□□□□ -1.04
RPSA-205ENST00000475346 KMT5BQ4FZB7 885 aa8.54□□□□□ -1.04
RPSA-205ENST00000475346 GJD4Q96KN9 370 aaPredicted RBP8.54□□□□□ -1.04
RPSA-205ENST00000475346 PCDHB3Q9Y5E6 796 aa8.54□□□□□ -1.04
RPSA-205ENST00000475346 VAC14Q08AM6 782 aa8.53□□□□□ -1.04
RPSA-205ENST00000475346 WASHC4Q2M389 1173 aa8.53□□□□□ -1.04
RPSA-205ENST00000475346 RSPH4AQ5TD94 716 aa8.53□□□□□ -1.04
RPSA-205ENST00000475346 ZNF516Q92618 1163 aa8.53□□□□□ -1.04
RPSA-205ENST00000475346 PPP1R12CQ9BZL4 782 aa8.53□□□□□ -1.04
RPSA-205ENST00000475346 IVNS1ABPQ9Y6Y0 642 aa8.53□□□□□ -1.04
RPSA-205ENST00000475346 E9PSI1 815 aa8.52□□□□□ -1.05
RPSA-205ENST00000475346 ITGBL1O95965 494 aaPredicted RBP8.52□□□□□ -1.05
RPSA-205ENST00000475346 GJA5P36382 358 aa8.52□□□□□ -1.05
RPSA-205ENST00000475346 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
RPSA-205ENST00000475346 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
RPSA-205ENST00000475346 IL21Q9HBE4 155 aa8.52□□□□□ -1.05
RPSA-205ENST00000475346 IGSF3O75054 1194 aa8.51□□□□□ -1.05
RPSA-205ENST00000475346 LMOD1P29536 600 aaPredicted RBP8.51□□□□□ -1.05
RPSA-205ENST00000475346 SRPK2P78362 688 aaKnown RBP8.51□□□□□ -1.05
RPSA-205ENST00000475346 BLOC1S3Q6QNY0 202 aa8.51□□□□□ -1.05
RPSA-205ENST00000475346 PRR14Q9BWN1 585 aa8.51□□□□□ -1.05
RPSA-205ENST00000475346 HMX1Q9NP08 348 aaPredicted RBP8.51□□□□□ -1.05
RPSA-205ENST00000475346 LOC105371045A0A1W2PR82 267 aa8.5□□□□□ -1.05
RPSA-205ENST00000475346 PALM3A6NDB9 673 aaPredicted RBP8.5□□□□□ -1.05
RPSA-205ENST00000475346 CCDC27Q2M243 656 aa8.5□□□□□ -1.05
RPSA-205ENST00000475346 PUS10Q3MIT2 529 aaKnown RBP8.5□□□□□ -1.05
RPSA-205ENST00000475346 PRPF38BQ5VTL8 546 aaKnown RBP8.5□□□□□ -1.05
RPSA-205ENST00000475346 CDCA8Q53HL2 280 aa8.49□□□□□ -1.05
RPSA-205ENST00000475346 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
RPSA-205ENST00000475346 TSC1Q92574 1164 aa8.49□□□□□ -1.05
RPSA-205ENST00000475346 A0A0G2JS52 829 aa8.48□□□□□ -1.05
RPSA-205ENST00000475346 KDM4AO75164 1064 aa8.48□□□□□ -1.05
RPSA-205ENST00000475346 CTDSPL2Q05D32 466 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms