RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 ALKQ9UM73 1620 aa13.5□□□□□ -0.25
DDX39B-217ENST00000474961 SETBP1Q9Y6X0 1596 aa13.5□□□□□ -0.25
DDX39B-217ENST00000474961 PLEKHG1Q9ULL1 1385 aa13.5□□□□□ -0.25
DDX39B-217ENST00000474961 SETD1AO15047 1707 aaKnown RBP13.5□□□□□ -0.25
DDX39B-217ENST00000474961 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
DDX39B-217ENST00000474961 ILDR1Q86SU0 546 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-217ENST00000474961 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
DDX39B-217ENST00000474961 BCANQ96GW7 911 aa13.49□□□□□ -0.25
DDX39B-217ENST00000474961 HSPA2P54652 639 aa13.48□□□□□ -0.25
DDX39B-217ENST00000474961 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
DDX39B-217ENST00000474961 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
DDX39B-217ENST00000474961 CARD11Q9BXL7 1154 aa13.47□□□□□ -0.25
DDX39B-217ENST00000474961 ADAMTS13Q76LX8 1427 aa13.46□□□□□ -0.26
DDX39B-217ENST00000474961 ADGRB1O14514 1584 aa13.45□□□□□ -0.26
DDX39B-217ENST00000474961 STRCQ7RTU9 1775 aa13.45□□□□□ -0.26
DDX39B-217ENST00000474961 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
DDX39B-217ENST00000474961 MED14O60244 1454 aa13.45□□□□□ -0.26
DDX39B-217ENST00000474961 TMEM132EQ6IEE7 984 aa13.45□□□□□ -0.26
DDX39B-217ENST00000474961 SLC26A8Q96RN1 970 aa13.44□□□□□ -0.26
DDX39B-217ENST00000474961 NPHP4O75161 1426 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-217ENST00000474961 DIP2AQ14689 1571 aa13.44□□□□□ -0.26
DDX39B-217ENST00000474961 TBX22Q9Y458 520 aa13.43□□□□□ -0.26
DDX39B-217ENST00000474961 HAX1O00165 279 aa13.42□□□□□ -0.26
DDX39B-217ENST00000474961 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
DDX39B-217ENST00000474961 EIF4G2P78344 907 aaKnown RBP eCLIP13.42□□□□□ -0.26
DDX39B-217ENST00000474961 METP08581 1390 aa13.42□□□□□ -0.26
DDX39B-217ENST00000474961 USP47Q96K76 1375 aa13.42□□□□□ -0.26
DDX39B-217ENST00000474961 YTHDC2Q9H6S0 1430 aaKnown RBP13.4□□□□□ -0.26
DDX39B-217ENST00000474961 ARHGEF28Q8N1W1 1705 aaKnown RBP13.4□□□□□ -0.26
DDX39B-217ENST00000474961 STK26Q9P289 416 aa13.4□□□□□ -0.26
DDX39B-217ENST00000474961 TRAK1Q9UPV9 953 aa13.4□□□□□ -0.26
DDX39B-217ENST00000474961 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
DDX39B-217ENST00000474961 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
DDX39B-217ENST00000474961 HIRIP3Q9BW71 556 aaPredicted RBP13.39□□□□□ -0.27
DDX39B-217ENST00000474961 LRPPRCP42704 1394 aaKnown RBP13.39□□□□□ -0.27
DDX39B-217ENST00000474961 KNDC1Q76NI1 1749 aa13.39□□□□□ -0.27
DDX39B-217ENST00000474961 PTPRUQ92729 1446 aa13.38□□□□□ -0.27
DDX39B-217ENST00000474961 PIK3R4Q99570 1358 aa13.37□□□□□ -0.27
DDX39B-217ENST00000474961 ST20-MTHFSA0A0A6YYL1 179 aa13.37□□□□□ -0.27
DDX39B-217ENST00000474961 EIF3AQ14152 1382 aaKnown RBP13.36□□□□□ -0.27
DDX39B-217ENST00000474961 ABCC11Q96J66 1382 aa13.36□□□□□ -0.27
DDX39B-217ENST00000474961 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
DDX39B-217ENST00000474961 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
DDX39B-217ENST00000474961 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
DDX39B-217ENST00000474961 QRICH2Q9H0J4 1663 aa13.35□□□□□ -0.27
DDX39B-217ENST00000474961 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
DDX39B-217ENST00000474961 AMOTL2Q9Y2J4 779 aa13.35□□□□□ -0.27
DDX39B-217ENST00000474961 CPS1P31327 1500 aa13.34□□□□□ -0.27
DDX39B-217ENST00000474961 TECPR2O15040 1411 aa13.34□□□□□ -0.27
DDX39B-217ENST00000474961 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-217ENST00000474961 CENPJQ9HC77 1338 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-217ENST00000474961 FBXO41Q8TF61 875 aa13.33□□□□□ -0.28
DDX39B-217ENST00000474961 SIRT1Q96EB6 747 aa13.33□□□□□ -0.28
DDX39B-217ENST00000474961 PRAM1Q96QH2 718 aa13.32□□□□□ -0.28
DDX39B-217ENST00000474961 TESK2Q96S53 571 aa13.32□□□□□ -0.28
DDX39B-217ENST00000474961 POGKQ9P215 609 aa13.32□□□□□ -0.28
DDX39B-217ENST00000474961 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
DDX39B-217ENST00000474961 NWD1Q149M9 1564 aa13.32□□□□□ -0.28
DDX39B-217ENST00000474961 FAM135BQ49AJ0 1406 aa13.31□□□□□ -0.28
DDX39B-217ENST00000474961 KCNA6P17658 529 aa13.31□□□□□ -0.28
DDX39B-217ENST00000474961 WAPLQ7Z5K2 1190 aa13.31□□□□□ -0.28
DDX39B-217ENST00000474961 SPOCK2Q92563 424 aa13.31□□□□□ -0.28
DDX39B-217ENST00000474961 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
DDX39B-217ENST00000474961 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
DDX39B-217ENST00000474961 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
DDX39B-217ENST00000474961 CD44P16070 742 aaKnown RBP13.3□□□□□ -0.28
DDX39B-217ENST00000474961 SAFB2Q14151 953 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDX39B-217ENST00000474961 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
DDX39B-217ENST00000474961 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
DDX39B-217ENST00000474961 SBNO2Q9Y2G9 1366 aa13.29□□□□□ -0.28
DDX39B-217ENST00000474961 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.28□□□□□ -0.28
DDX39B-217ENST00000474961 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
DDX39B-217ENST00000474961 TMF1P82094 1093 aa13.27□□□□□ -0.29
DDX39B-217ENST00000474961 MINK1Q8N4C8 1332 aaPredicted RBP13.27□□□□□ -0.29
DDX39B-217ENST00000474961 NKTRP30414 1462 aaKnown RBP13.26□□□□□ -0.29
DDX39B-217ENST00000474961 DISP3Q9P2K9 1392 aa13.26□□□□□ -0.29
DDX39B-217ENST00000474961 PROSER2Q86WR7 435 aaPredicted RBP13.25□□□□□ -0.29
DDX39B-217ENST00000474961 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
DDX39B-217ENST00000474961 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
DDX39B-217ENST00000474961 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
DDX39B-217ENST00000474961 WASHC2AQ641Q2 1341 aa13.24□□□□□ -0.29
DDX39B-217ENST00000474961 ZNF335Q9H4Z2 1342 aaPredicted RBP13.24□□□□□ -0.29
DDX39B-217ENST00000474961 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
DDX39B-217ENST00000474961 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
DDX39B-217ENST00000474961 NUBP1P53384 320 aa13.23□□□□□ -0.29
DDX39B-217ENST00000474961 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
DDX39B-217ENST00000474961 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
DDX39B-217ENST00000474961 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
DDX39B-217ENST00000474961 ADGRB2O60241 1585 aa13.23□□□□□ -0.29
DDX39B-217ENST00000474961 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
DDX39B-217ENST00000474961 CDCA8Q53HL2 280 aa13.22□□□□□ -0.29
DDX39B-217ENST00000474961 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
DDX39B-217ENST00000474961 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
DDX39B-217ENST00000474961 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
DDX39B-217ENST00000474961 WASLO00401 505 aaPredicted RBP13.21□□□□□ -0.29
DDX39B-217ENST00000474961 CDK19Q9BWU1 502 aa13.21□□□□□ -0.29
DDX39B-217ENST00000474961 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
DDX39B-217ENST00000474961 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
DDX39B-217ENST00000474961 GSE1Q14687 1217 aa13.19□□□□□ -0.3
DDX39B-217ENST00000474961 C14orf37Q86TY3 774 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms