RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 ORAI2Q96SN7 254 aa10.5□□□□□ -0.73
LSAMP-203ENST00000474851 XRN1Q8IZH2 1706 aaKnown RBP10.5□□□□□ -0.73
LSAMP-203ENST00000474851 JCADQ9P266 1359 aa10.49□□□□□ -0.73
LSAMP-203ENST00000474851 YTHDC2Q9H6S0 1430 aaKnown RBP10.49□□□□□ -0.73
LSAMP-203ENST00000474851 MYOM2P54296 1465 aa10.48□□□□□ -0.73
LSAMP-203ENST00000474851 C1orf167Q5SNV9 1468 aa10.48□□□□□ -0.73
LSAMP-203ENST00000474851 PRAM1Q96QH2 718 aa10.47□□□□□ -0.73
LSAMP-203ENST00000474851 ASXL1Q8IXJ9 1541 aa10.47□□□□□ -0.73
LSAMP-203ENST00000474851 SOCS7O14512 581 aa10.46□□□□□ -0.73
LSAMP-203ENST00000474851 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.73
LSAMP-203ENST00000474851 SIN3AQ96ST3 1273 aa10.46□□□□□ -0.73
LSAMP-203ENST00000474851 SOS2Q07890 1332 aaPredicted RBP10.46□□□□□ -0.73
LSAMP-203ENST00000474851 ROBO1Q9Y6N7 1651 aa10.45□□□□□ -0.74
LSAMP-203ENST00000474851 MED1Q15648 1581 aaPredicted RBP10.45□□□□□ -0.74
LSAMP-203ENST00000474851 ESCO1Q5FWF5 840 aa10.45□□□□□ -0.74
LSAMP-203ENST00000474851 KIF1BO60333 1816 aa10.44□□□□□ -0.74
LSAMP-203ENST00000474851 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.44□□□□□ -0.74
LSAMP-203ENST00000474851 SPATA31A6Q5VVP1 1343 aa10.44□□□□□ -0.74
LSAMP-203ENST00000474851 NUTM2FA1L443 756 aa10.44□□□□□ -0.74
LSAMP-203ENST00000474851 TRIM26Q12899 539 aaPredicted RBP10.44□□□□□ -0.74
LSAMP-203ENST00000474851 POTEAQ6S8J7 498 aa10.44□□□□□ -0.74
LSAMP-203ENST00000474851 L3MBTL2Q969R5 705 aa10.44□□□□□ -0.74
LSAMP-203ENST00000474851 TRAK1Q9UPV9 953 aa10.44□□□□□ -0.74
LSAMP-203ENST00000474851 FOXO3O43524 673 aa10.43□□□□□ -0.74
LSAMP-203ENST00000474851 SAFB2Q14151 953 aaKnown RBP eCLIP10.43□□□□□ -0.74
LSAMP-203ENST00000474851 NBPF1Q3BBV0 1214 aa10.43□□□□□ -0.74
LSAMP-203ENST00000474851 PPLO60437 1756 aa10.43□□□□□ -0.74
LSAMP-203ENST00000474851 SETD1AO15047 1707 aaKnown RBP10.43□□□□□ -0.74
LSAMP-203ENST00000474851 POGKQ9P215 609 aa10.42□□□□□ -0.74
LSAMP-203ENST00000474851 AHDC1Q5TGY3 1603 aaPredicted RBP10.42□□□□□ -0.74
LSAMP-203ENST00000474851 ADGRB1O14514 1584 aa10.41□□□□□ -0.74
LSAMP-203ENST00000474851 POTEHQ6S545 545 aa10.41□□□□□ -0.74
LSAMP-203ENST00000474851 NUTM2BA6NNL0 878 aaPredicted RBP10.4□□□□□ -0.74
LSAMP-203ENST00000474851 NUTM2EB1AL46 878 aaPredicted RBP10.4□□□□□ -0.74
LSAMP-203ENST00000474851 NEUROD1Q13562 356 aa10.4□□□□□ -0.74
LSAMP-203ENST00000474851 NUTM2AQ8IVF1 878 aaPredicted RBP10.4□□□□□ -0.74
LSAMP-203ENST00000474851 HIRIP3Q9BW71 556 aaPredicted RBP10.4□□□□□ -0.74
LSAMP-203ENST00000474851 COL16A1Q07092 1604 aaPredicted RBP10.4□□□□□ -0.75
LSAMP-203ENST00000474851 PNPLA6Q8IY17 1366 aa10.39□□□□□ -0.75
LSAMP-203ENST00000474851 NPHP3Q7Z494 1330 aa10.39□□□□□ -0.75
LSAMP-203ENST00000474851 XPCQ01831 940 aaPredicted RBP10.39□□□□□ -0.75
LSAMP-203ENST00000474851 LRP6O75581 1613 aa10.39□□□□□ -0.75
LSAMP-203ENST00000474851 MINK1Q8N4C8 1332 aaPredicted RBP10.38□□□□□ -0.75
LSAMP-203ENST00000474851 WASLO00401 505 aaPredicted RBP10.38□□□□□ -0.75
LSAMP-203ENST00000474851 PHF8Q9UPP1 1060 aa10.38□□□□□ -0.75
LSAMP-203ENST00000474851 PRR36Q9H6K5 1346 aa10.37□□□□□ -0.75
LSAMP-203ENST00000474851 KRT28Q7Z3Y7 464 aa10.37□□□□□ -0.75
LSAMP-203ENST00000474851 IFT172Q9UG01 1749 aa10.37□□□□□ -0.75
LSAMP-203ENST00000474851 DLC1Q96QB1 1528 aa10.37□□□□□ -0.75
LSAMP-203ENST00000474851 NALCNQ8IZF0 1738 aa10.36□□□□□ -0.75
LSAMP-203ENST00000474851 CDC42BPGQ6DT37 1551 aa10.36□□□□□ -0.75
LSAMP-203ENST00000474851 NBPF8Q3BBV2 869 aa10.36□□□□□ -0.75
LSAMP-203ENST00000474851 MEX3CQ5U5Q3 659 aaKnown RBP10.36□□□□□ -0.75
LSAMP-203ENST00000474851 ZNF772Q68DY9 489 aaPredicted RBP10.36□□□□□ -0.75
LSAMP-203ENST00000474851 SPATA31A3Q5VYP0 1347 aa10.35□□□□□ -0.75
LSAMP-203ENST00000474851 ZBTB22O15209 634 aa10.35□□□□□ -0.75
LSAMP-203ENST00000474851 ADAMTS2O95450 1211 aa10.35□□□□□ -0.75
LSAMP-203ENST00000474851 PMFBP1Q8TBY8 1022 aa10.35□□□□□ -0.75
LSAMP-203ENST00000474851 PXDNQ92626 1479 aa10.35□□□□□ -0.75
LSAMP-203ENST00000474851 PHLPP1O60346 1717 aa10.34□□□□□ -0.75
LSAMP-203ENST00000474851 FNBP4Q8N3X1 1017 aaPredicted RBP10.34□□□□□ -0.75
LSAMP-203ENST00000474851 NUDT16Q96DE0 195 aaKnown RBP10.34□□□□□ -0.75
LSAMP-203ENST00000474851 CDK19Q9BWU1 502 aa10.34□□□□□ -0.75
LSAMP-203ENST00000474851 AFF2P51816 1311 aa10.33□□□□□ -0.76
LSAMP-203ENST00000474851 PSME1Q06323 249 aa10.33□□□□□ -0.76
LSAMP-203ENST00000474851 C8orf37Q96NL8 207 aa10.33□□□□□ -0.76
LSAMP-203ENST00000474851 ANKARQ7Z5J8 1434 aa10.33□□□□□ -0.76
LSAMP-203ENST00000474851 NGLY1Q96IV0 654 aa10.32□□□□□ -0.76
LSAMP-203ENST00000474851 QTRT2Q9H974 415 aaKnown RBP10.32□□□□□ -0.76
LSAMP-203ENST00000474851 SBNO1A3KN83 1393 aa10.31□□□□□ -0.76
LSAMP-203ENST00000474851 RXRBP28702 533 aa10.31□□□□□ -0.76
LSAMP-203ENST00000474851 MYT1Q01538 1121 aa10.31□□□□□ -0.76
LSAMP-203ENST00000474851 CCDC61Q9Y6R9 512 aa10.31□□□□□ -0.76
LSAMP-203ENST00000474851 LAMC1P11047 1609 aa10.31□□□□□ -0.76
LSAMP-203ENST00000474851 CENPJQ9HC77 1338 aaPredicted RBP10.31□□□□□ -0.76
LSAMP-203ENST00000474851 NHSL1Q5SYE7 1610 aa10.3□□□□□ -0.76
LSAMP-203ENST00000474851 PLEKHG3A1L390 1219 aa10.3□□□□□ -0.76
LSAMP-203ENST00000474851 CABLES1Q8TDN4 633 aa10.3□□□□□ -0.76
LSAMP-203ENST00000474851 KNDC1Q76NI1 1749 aa10.3□□□□□ -0.76
LSAMP-203ENST00000474851 EIF3AQ14152 1382 aaKnown RBP10.29□□□□□ -0.76
LSAMP-203ENST00000474851 NGDNQ8NEJ9 315 aaKnown RBP10.29□□□□□ -0.76
LSAMP-203ENST00000474851 GPRASP1Q5JY77 1395 aa10.28□□□□□ -0.76
LSAMP-203ENST00000474851 RBM6P78332 1123 aaKnown RBP10.28□□□□□ -0.76
LSAMP-203ENST00000474851 CABP2Q9NPB3 220 aa10.28□□□□□ -0.76
LSAMP-203ENST00000474851 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
LSAMP-203ENST00000474851 USP21Q9UK80 565 aa10.28□□□□□ -0.76
LSAMP-203ENST00000474851 SHPRHQ149N8 1683 aa10.28□□□□□ -0.76
LSAMP-203ENST00000474851 ROCK2O75116 1388 aaKnown RBP10.27□□□□□ -0.76
LSAMP-203ENST00000474851 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
LSAMP-203ENST00000474851 ACEP12821 1306 aa10.27□□□□□ -0.77
LSAMP-203ENST00000474851 ADGRB2O60241 1585 aa10.26□□□□□ -0.77
LSAMP-203ENST00000474851 TNS3Q68CZ2 1445 aa10.26□□□□□ -0.77
LSAMP-203ENST00000474851 BCL9LQ86UU0 1499 aa10.26□□□□□ -0.77
LSAMP-203ENST00000474851 FAM83GA6ND36 823 aa10.26□□□□□ -0.77
LSAMP-203ENST00000474851 SRPK2P78362 688 aaKnown RBP10.26□□□□□ -0.77
LSAMP-203ENST00000474851 PCGF6Q9BYE7 350 aa10.26□□□□□ -0.77
LSAMP-203ENST00000474851 CABP1Q9NZU7 370 aa10.26□□□□□ -0.77
LSAMP-203ENST00000474851 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
LSAMP-203ENST00000474851 TULP4Q9NRJ4 1543 aa10.26□□□□□ -0.77
LSAMP-203ENST00000474851 POLR3AO14802 1390 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms