RNA–Protein interactions for RNA: ENST00000474281.1

PGK1-202, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 1 (best)

Gene PGK1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-202ENST00000474281 HELBQ8NG08 1087 aaPredicted RBP7.02□□□□□ -1.29
PGK1-202ENST00000474281 VRTNQ9H8Y1 702 aa7.02□□□□□ -1.29
PGK1-202ENST00000474281 TFIP11Q9UBB9 837 aaKnown RBP7.02□□□□□ -1.29
PGK1-202ENST00000474281 LHX6Q9UPM6 363 aa7.02□□□□□ -1.29
PGK1-202ENST00000474281 CARNS1A5YM72 827 aa7.01□□□□□ -1.29
PGK1-202ENST00000474281 TMEM88BA6NKF7 163 aa7.01□□□□□ -1.29
PGK1-202ENST00000474281 RIMBP2O15034 1052 aa7.01□□□□□ -1.29
PGK1-202ENST00000474281 PRR7Q8TB68 274 aa7.01□□□□□ -1.29
PGK1-202ENST00000474281 LRRN4Q8WUT4 740 aa7.01□□□□□ -1.29
PGK1-202ENST00000474281 UCN2Q96RP3 112 aa7.01□□□□□ -1.29
PGK1-202ENST00000474281 AMOTL2Q9Y2J4 779 aa7.01□□□□□ -1.29
PGK1-202ENST00000474281 E9PSI1 815 aa7□□□□□ -1.29
PGK1-202ENST00000474281 GUCA2AQ02747 115 aa7□□□□□ -1.29
PGK1-202ENST00000474281 SND1Q7KZF4 910 aaKnown RBP eCLIP7□□□□□ -1.291e-10■□□□□ 10.3
PGK1-202ENST00000474281 IVNS1ABPQ9Y6Y0 642 aa7□□□□□ -1.29
PGK1-202ENST00000474281 SMAPO00193 183 aa6.99□□□□□ -1.29
PGK1-202ENST00000474281 SLC10A3P09131 477 aa6.99□□□□□ -1.29
PGK1-202ENST00000474281 POTEIP0CG38 1075 aa6.99□□□□□ -1.29
PGK1-202ENST00000474281 CCDC27Q2M243 656 aa6.99□□□□□ -1.29
PGK1-202ENST00000474281 HLA-CQ95604 372 aa6.99□□□□□ -1.29
PGK1-202ENST00000474281 EPS8L1Q8TE68 723 aa6.98□□□□□ -1.29
PGK1-202ENST00000474281 MAFBQ9Y5Q3 323 aaPredicted RBP6.98□□□□□ -1.29
PGK1-202ENST00000474281 CFAP99D6REC4 459 aa6.97□□□□□ -1.29
PGK1-202ENST00000474281 SEMA3FQ13275 785 aa6.97□□□□□ -1.29
PGK1-202ENST00000474281 CDCA8Q53HL2 280 aa6.97□□□□□ -1.29
PGK1-202ENST00000474281 TSC1Q92574 1164 aa6.97□□□□□ -1.29
PGK1-202ENST00000474281 GNEQ9Y223 722 aaKnown RBP6.97□□□□□ -1.29
PGK1-202ENST00000474281 PROX2Q3B8N5 592 aa6.96□□□□□ -1.3
PGK1-202ENST00000474281 SLF2Q8IX21 1173 aa6.96□□□□□ -1.3
PGK1-202ENST00000474281 ATP9BO43861 1147 aa6.95□□□□□ -1.3
PGK1-202ENST00000474281 NR6A1Q15406 480 aa6.95□□□□□ -1.3
PGK1-202ENST00000474281 TBC1D9Q6ZT07 1266 aa6.95□□□□□ -1.3
PGK1-202ENST00000474281 C6orf229H3BNL8 230 aa6.94□□□□□ -1.3
PGK1-202ENST00000474281 ELOAQ14241 798 aaKnown RBP6.94□□□□□ -1.3
PGK1-202ENST00000474281 GRIPAP1Q4V328 841 aa6.94□□□□□ -1.3
PGK1-202ENST00000474281 SWT1Q5T5J6 900 aaKnown RBP6.94□□□□□ -1.3
PGK1-202ENST00000474281 PNMA1Q8ND90 353 aa6.94□□□□□ -1.3
PGK1-202ENST00000474281 LOC105371045A0A1W2PR82 267 aa6.93□□□□□ -1.3
PGK1-202ENST00000474281 IGSF3O75054 1194 aa6.93□□□□□ -1.3
PGK1-202ENST00000474281 EIF4G2P78344 907 aaKnown RBP eCLIP6.93□□□□□ -1.3
PGK1-202ENST00000474281 KIAA1468Q9P260 1216 aa6.93□□□□□ -1.3
PGK1-202ENST00000474281 FUT2Q10981 343 aa6.92□□□□□ -1.3
PGK1-202ENST00000474281 KANK4Q5T7N3 995 aaPredicted RBP6.92□□□□□ -1.3
PGK1-202ENST00000474281 B4GALNT3Q6L9W6 998 aa6.92□□□□□ -1.3
PGK1-202ENST00000474281 PER1O15534 1290 aaPredicted RBP6.91□□□□□ -1.3
PGK1-202ENST00000474281 SYMPKQ92797 1274 aaKnown RBP6.91□□□□□ -1.3
PGK1-202ENST00000474281 ZBED2Q9BTP6 218 aa6.91□□□□□ -1.3
PGK1-202ENST00000474281 ATP6V1AP38606 617 aa6.9□□□□□ -1.3
PGK1-202ENST00000474281 HDGFP51858 240 aaKnown RBP6.9□□□□□ -1.3
PGK1-202ENST00000474281 NR1H3Q13133 447 aa6.9□□□□□ -1.3
PGK1-202ENST00000474281 DESI1Q6ICB0 168 aa6.9□□□□□ -1.3
PGK1-202ENST00000474281 TMEM164Q5U3C3 297 aa6.89□□□□□ -1.31
PGK1-202ENST00000474281 TXNDC2Q86VQ3 553 aa6.89□□□□□ -1.31
PGK1-202ENST00000474281 NFATC2IPQ8NCF5 419 aa6.89□□□□□ -1.31
PGK1-202ENST00000474281 CCER1Q8TC90 406 aaPredicted RBP6.89□□□□□ -1.31
PGK1-202ENST00000474281 KCNK17Q96T54 332 aa6.89□□□□□ -1.31
PGK1-202ENST00000474281 ZMIZ1Q9ULJ6 1067 aa6.89□□□□□ -1.31
PGK1-202ENST00000474281 SHROOM4Q9ULL8 1493 aa6.89□□□□□ -1.31
PGK1-202ENST00000474281 SLC4A3P48751 1232 aa6.88□□□□□ -1.31
PGK1-202ENST00000474281 RETREG3Q86VR2 466 aa6.88□□□□□ -1.31
PGK1-202ENST00000474281 RABGEF1Q9UJ41 708 aa6.88□□□□□ -1.31
PGK1-202ENST00000474281 CFHP08603 1231 aa6.87□□□□□ -1.31
PGK1-202ENST00000474281 POTEJP0CG39 1038 aa6.87□□□□□ -1.31
PGK1-202ENST00000474281 PHLDB3Q6NSJ2 640 aa6.87□□□□□ -1.31
PGK1-202ENST00000474281 LYPD8Q6UX82 237 aa6.87□□□□□ -1.31
PGK1-202ENST00000474281 KCNH8Q96L42 1107 aa6.87□□□□□ -1.31
PGK1-202ENST00000474281 RBM47A0AV96 593 aaKnown RBP6.86□□□□□ -1.31
PGK1-202ENST00000474281 ZBBXA8MT70 800 aa6.86□□□□□ -1.31
PGK1-202ENST00000474281 FBXO45P0C2W1 286 aa6.86□□□□□ -1.31
PGK1-202ENST00000474281 HOXB1P14653 301 aaPredicted RBP6.86□□□□□ -1.31
PGK1-202ENST00000474281 PLEKHM2Q8IWE5 1019 aa6.86□□□□□ -1.31
PGK1-202ENST00000474281 STK32AQ8WU08 396 aa6.86□□□□□ -1.31
PGK1-202ENST00000474281 SLC4A5Q9BY07 1137 aa6.86□□□□□ -1.31
PGK1-202ENST00000474281 USP17L3A6NCW0 530 aa6.85□□□□□ -1.31
PGK1-202ENST00000474281 USP17L4A6NCW7 530 aa6.85□□□□□ -1.31
PGK1-202ENST00000474281 FAM196BA6NMK8 535 aa6.85□□□□□ -1.31
PGK1-202ENST00000474281 PIK3CDO00329 1044 aa6.85□□□□□ -1.31
PGK1-202ENST00000474281 FAM98CQ17RN3 349 aaKnown RBP6.85□□□□□ -1.31
PGK1-202ENST00000474281 USP17L2Q6R6M4 530 aa6.85□□□□□ -1.31
PGK1-202ENST00000474281 USP17L1Q7RTZ2 530 aa6.85□□□□□ -1.31
PGK1-202ENST00000474281 SEPT9Q9UHD8 586 aaPredicted RBP6.85□□□□□ -1.31
PGK1-202ENST00000474281 NOVA2Q9UNW9 492 aaKnown RBP6.85□□□□□ -1.31
PGK1-202ENST00000474281 UNCXA6NJT0 531 aa6.84□□□□□ -1.31
PGK1-202ENST00000474281 ERCC3P19447 782 aa6.84□□□□□ -1.31
PGK1-202ENST00000474281 SSFA2P28290 1259 aa6.84□□□□□ -1.31
PGK1-202ENST00000474281 ARID4AP29374 1257 aaPredicted RBP6.84□□□□□ -1.31
PGK1-202ENST00000474281 Q3C1V9 767 aa6.84□□□□□ -1.31
PGK1-202ENST00000474281 MORN1Q5T089 497 aa6.84□□□□□ -1.31
PGK1-202ENST00000474281 SKIP12755 728 aa6.83□□□□□ -1.32
PGK1-202ENST00000474281 PSEN2P49810 448 aa6.83□□□□□ -1.32
PGK1-202ENST00000474281 SAMD7Q7Z3H4 446 aa6.83□□□□□ -1.32
PGK1-202ENST00000474281 FKBPLQ9UIM3 349 aa6.83□□□□□ -1.32
PGK1-202ENST00000474281 MYT1LQ9UL68 1186 aa6.83□□□□□ -1.32
PGK1-202ENST00000474281 ZC3H4Q9UPT8 1303 aaKnown RBP6.82□□□□□ -1.32
PGK1-202ENST00000474281 USP17L5A8MUK1 530 aa6.82□□□□□ -1.32
PGK1-202ENST00000474281 KMT5BQ4FZB7 885 aa6.82□□□□□ -1.32
PGK1-202ENST00000474281 IGSF5Q9NSI5 407 aa6.82□□□□□ -1.32
PGK1-202ENST00000474281 MKRN1Q9UHC7 482 aaKnown RBP6.82□□□□□ -1.32
PGK1-202ENST00000474281 SLC27A5Q9Y2P5 690 aa6.82□□□□□ -1.32
PGK1-202ENST00000474281 USP17L15C9J2P7 530 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms