RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 RPIAP49247 311 aa11.89□□□□□ -0.51
RFXAP-202ENST00000472888 AMHR2Q16671 573 aa11.89□□□□□ -0.51
RFXAP-202ENST00000472888 GCGRP47871 477 aa11.88□□□□□ -0.51
RFXAP-202ENST00000472888 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
RFXAP-202ENST00000472888 TRIM66O15016 1216 aa11.87□□□□□ -0.51
RFXAP-202ENST00000472888 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
RFXAP-202ENST00000472888 MORN1Q5T089 497 aa11.86□□□□□ -0.51
RFXAP-202ENST00000472888 GMPR2Q9P2T1 348 aaKnown RBP11.86□□□□□ -0.51
RFXAP-202ENST00000472888 FCF1Q9Y324 198 aaKnown RBP11.86□□□□□ -0.51
RFXAP-202ENST00000472888 CD46P15529 392 aa11.85□□□□□ -0.51
RFXAP-202ENST00000472888 FAM160A2Q8N612 972 aaPredicted RBP11.85□□□□□ -0.51
RFXAP-202ENST00000472888 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
RFXAP-202ENST00000472888 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
RFXAP-202ENST00000472888 SSTR3P32745 418 aaPredicted RBP11.83□□□□□ -0.52
RFXAP-202ENST00000472888 FUT2Q10981 343 aa11.82□□□□□ -0.52
RFXAP-202ENST00000472888 PRDM9Q9NQV7 894 aa11.82□□□□□ -0.52
RFXAP-202ENST00000472888 KDM4AO75164 1064 aa11.81□□□□□ -0.52
RFXAP-202ENST00000472888 SMCPP49901 116 aaPredicted RBP11.81□□□□□ -0.52
RFXAP-202ENST00000472888 USP46P62068 366 aa11.81□□□□□ -0.52
RFXAP-202ENST00000472888 NFX1Q12986 1120 aaKnown RBP11.81□□□□□ -0.52
RFXAP-202ENST00000472888 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
RFXAP-202ENST00000472888 NUTM1Q86Y26 1132 aa11.81□□□□□ -0.52
RFXAP-202ENST00000472888 AXIN1O15169 862 aa11.8□□□□□ -0.52
RFXAP-202ENST00000472888 LCE2CQ5TA81 110 aa11.8□□□□□ -0.52
RFXAP-202ENST00000472888 WFS1O76024 890 aa11.79□□□□□ -0.52
RFXAP-202ENST00000472888 PDE4DQ08499 809 aa11.79□□□□□ -0.52
RFXAP-202ENST00000472888 CTC1Q2NKJ3 1217 aa11.79□□□□□ -0.52
RFXAP-202ENST00000472888 CYP4X1Q8N118 509 aa11.79□□□□□ -0.52
RFXAP-202ENST00000472888 SLC27A5Q9Y2P5 690 aa11.79□□□□□ -0.52
RFXAP-202ENST00000472888 CD2BP2O95400 341 aaKnown RBP11.78□□□□□ -0.52
RFXAP-202ENST00000472888 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
RFXAP-202ENST00000472888 C11orf95C9JLR9 678 aaPredicted RBP11.77□□□□□ -0.53
RFXAP-202ENST00000472888 PARP9Q8IXQ6 854 aa11.77□□□□□ -0.53
RFXAP-202ENST00000472888 BRICD5Q6PL45 260 aa11.76□□□□□ -0.53
RFXAP-202ENST00000472888 DIXDC1Q155Q3 683 aa11.75□□□□□ -0.53
RFXAP-202ENST00000472888 Q3C1V9 767 aa11.75□□□□□ -0.53
RFXAP-202ENST00000472888 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
RFXAP-202ENST00000472888 WIPF1O43516 503 aa11.74□□□□□ -0.53
RFXAP-202ENST00000472888 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
RFXAP-202ENST00000472888 SMPD1P17405 629 aa11.73□□□□□ -0.53
RFXAP-202ENST00000472888 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
RFXAP-202ENST00000472888 MSS51Q4VC12 460 aa11.72□□□□□ -0.53
RFXAP-202ENST00000472888 RNF19BQ6ZMZ0 732 aa11.72□□□□□ -0.53
RFXAP-202ENST00000472888 WNT7AO00755 349 aa11.7□□□□□ -0.54
RFXAP-202ENST00000472888 HOXA2O43364 376 aa11.7□□□□□ -0.54
RFXAP-202ENST00000472888 TPRNQ4KMQ1 711 aa11.7□□□□□ -0.54
RFXAP-202ENST00000472888 SNRPBP14678 240 aaKnown RBP11.69□□□□□ -0.54
RFXAP-202ENST00000472888 STK17AQ9UEE5 414 aa11.69□□□□□ -0.54
RFXAP-202ENST00000472888 TTC24A2A3L6 582 aaPredicted RBP11.68□□□□□ -0.54
RFXAP-202ENST00000472888 ATP13A2Q9NQ11 1180 aa11.68□□□□□ -0.54
RFXAP-202ENST00000472888 MS4A1P11836 297 aa11.67□□□□□ -0.54
RFXAP-202ENST00000472888 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
RFXAP-202ENST00000472888 TRIM32Q13049 653 aa11.66□□□□□ -0.54
RFXAP-202ENST00000472888 SNIP1Q8TAD8 396 aaKnown RBP11.66□□□□□ -0.54
RFXAP-202ENST00000472888 J3QL48 77 aa11.65□□□□□ -0.54
RFXAP-202ENST00000472888 MRGPRX2Q96LB1 330 aa11.65□□□□□ -0.54
RFXAP-202ENST00000472888 MMP16P51512 607 aa11.64□□□□□ -0.55
RFXAP-202ENST00000472888 ZBTB24O43167 697 aaPredicted RBP11.63□□□□□ -0.55
RFXAP-202ENST00000472888 FDX1P10109 184 aa11.63□□□□□ -0.55
RFXAP-202ENST00000472888 TRIM47Q96LD4 638 aa11.63□□□□□ -0.55
RFXAP-202ENST00000472888 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
RFXAP-202ENST00000472888 TERTO14746 1132 aaKnown RBP11.62□□□□□ -0.55
RFXAP-202ENST00000472888 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
RFXAP-202ENST00000472888 HPS1Q92902 700 aa11.61□□□□□ -0.55
RFXAP-202ENST00000472888 USB1Q9BQ65 265 aaKnown RBP11.61□□□□□ -0.55
RFXAP-202ENST00000472888 KDM4CQ9H3R0 1056 aa11.61□□□□□ -0.55
RFXAP-202ENST00000472888 GJA5P36382 358 aa11.6□□□□□ -0.55
RFXAP-202ENST00000472888 INSM1Q01101 510 aaPredicted RBP11.6□□□□□ -0.55
RFXAP-202ENST00000472888 HLA-CQ95604 372 aa11.6□□□□□ -0.55
RFXAP-202ENST00000472888 MOXD2PA6NHM9 499 aa11.59□□□□□ -0.55
RFXAP-202ENST00000472888 C6orf229H3BNL8 230 aa11.59□□□□□ -0.55
RFXAP-202ENST00000472888 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
RFXAP-202ENST00000472888 DXOO77932 396 aaKnown RBP11.58□□□□□ -0.56
RFXAP-202ENST00000472888 NDUFV2P19404 249 aa11.58□□□□□ -0.56
RFXAP-202ENST00000472888 GUCA2AQ02747 115 aa11.58□□□□□ -0.56
RFXAP-202ENST00000472888 GPBP1L1Q9HC44 474 aaPredicted RBP11.57□□□□□ -0.56
RFXAP-202ENST00000472888 SPDYE5A6NIY4 337 aa11.56□□□□□ -0.56
RFXAP-202ENST00000472888 SKOR1P84550 965 aa11.56□□□□□ -0.56
RFXAP-202ENST00000472888 NEUROD2Q15784 382 aa11.56□□□□□ -0.56
RFXAP-202ENST00000472888 RIC3Q7Z5B4 369 aa11.56□□□□□ -0.56
RFXAP-202ENST00000472888 RSBN1LQ6PCB5 846 aaPredicted RBP11.55□□□□□ -0.56
RFXAP-202ENST00000472888 RETREG3Q86VR2 466 aa11.55□□□□□ -0.56
RFXAP-202ENST00000472888 SENP2Q9HC62 589 aa11.55□□□□□ -0.56
RFXAP-202ENST00000472888 SPTLC1O15269 473 aa11.54□□□□□ -0.56
RFXAP-202ENST00000472888 MTMR2Q13614 643 aa11.54□□□□□ -0.56
RFXAP-202ENST00000472888 PCDHGC3Q9UN70 934 aa11.54□□□□□ -0.56
RFXAP-202ENST00000472888 RC3H1Q5TC82 1133 aaKnown RBP11.52□□□□□ -0.57
RFXAP-202ENST00000472888 MYSM1Q5VVJ2 828 aa11.52□□□□□ -0.57
RFXAP-202ENST00000472888 SYMPKQ92797 1274 aaKnown RBP11.52□□□□□ -0.57
RFXAP-202ENST00000472888 LORP23490 312 aaPredicted RBP11.51□□□□□ -0.57
RFXAP-202ENST00000472888 PRPF38BQ5VTL8 546 aaKnown RBP11.51□□□□□ -0.57
RFXAP-202ENST00000472888 ZBTB3Q9H5J0 574 aa11.51□□□□□ -0.57
RFXAP-202ENST00000472888 ATP1B4Q9UN42 357 aaPredicted RBP11.51□□□□□ -0.57
RFXAP-202ENST00000472888 KIFC2Q96AC6 838 aa11.5□□□□□ -0.57
RFXAP-202ENST00000472888 FAM117AQ9C073 453 aa11.5□□□□□ -0.57
RFXAP-202ENST00000472888 NUTM2BA6NNL0 878 aaPredicted RBP11.48□□□□□ -0.57
RFXAP-202ENST00000472888 NUTM2EB1AL46 878 aaPredicted RBP11.48□□□□□ -0.57
RFXAP-202ENST00000472888 JUNDP17535 347 aa11.48□□□□□ -0.57
RFXAP-202ENST00000472888 CLK2P49760 499 aaKnown RBP11.48□□□□□ -0.57
RFXAP-202ENST00000472888 WNT7BP56706 349 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms