RNA–Protein interactions for RNA: ENST00000472033.1

ABCA4-205, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-205ENST00000472033 USP46P62068 366 aa11.38□□□□□ -0.59
ABCA4-205ENST00000472033 SCUBE3Q8IX30 993 aa11.37□□□□□ -0.59
ABCA4-205ENST00000472033 BEGAINQ9BUH8 593 aa11.37□□□□□ -0.59
ABCA4-205ENST00000472033 CCDC88BA6NC98 1476 aa11.37□□□□□ -0.59
ABCA4-205ENST00000472033 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
ABCA4-205ENST00000472033 MRC2Q9UBG0 1479 aa11.37□□□□□ -0.59
ABCA4-205ENST00000472033 CEP164Q9UPV0 1460 aa11.37□□□□□ -0.59
ABCA4-205ENST00000472033 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
ABCA4-205ENST00000472033 HOXA2O43364 376 aa11.35□□□□□ -0.59
ABCA4-205ENST00000472033 ADH1BP00325 375 aa11.33□□□□□ -0.6
ABCA4-205ENST00000472033 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
ABCA4-205ENST00000472033 HLA-CQ95604 372 aa11.33□□□□□ -0.6
ABCA4-205ENST00000472033 WDR62O43379 1518 aa11.32□□□□□ -0.6
ABCA4-205ENST00000472033 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
ABCA4-205ENST00000472033 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
ABCA4-205ENST00000472033 SPSB2Q99619 263 aa11.31□□□□□ -0.6
ABCA4-205ENST00000472033 FMNL1O95466 1100 aaPredicted RBP11.3□□□□□ -0.6
ABCA4-205ENST00000472033 GGCXP38435 758 aa11.3□□□□□ -0.6
ABCA4-205ENST00000472033 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
ABCA4-205ENST00000472033 Q3C1V9 767 aa11.3□□□□□ -0.6
ABCA4-205ENST00000472033 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
ABCA4-205ENST00000472033 THAP11Q96EK4 314 aa11.29□□□□□ -0.6
ABCA4-205ENST00000472033 TBC1D2Q9BYX2 928 aa11.29□□□□□ -0.6
ABCA4-205ENST00000472033 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
ABCA4-205ENST00000472033 RNF19BQ6ZMZ0 732 aa11.28□□□□□ -0.6
ABCA4-205ENST00000472033 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.28□□□□□ -0.6
ABCA4-205ENST00000472033 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
ABCA4-205ENST00000472033 PRDM2Q13029 1718 aa11.27□□□□□ -0.61
ABCA4-205ENST00000472033 S1PR4O95977 384 aa11.27□□□□□ -0.61
ABCA4-205ENST00000472033 DIXDC1Q155Q3 683 aa11.27□□□□□ -0.61
ABCA4-205ENST00000472033 SLC6A16Q9GZN6 736 aa11.27□□□□□ -0.61
ABCA4-205ENST00000472033 MOXD2PA6NHM9 499 aa11.26□□□□□ -0.61
ABCA4-205ENST00000472033 SUPT5HO00267 1087 aaKnown RBP11.26□□□□□ -0.61
ABCA4-205ENST00000472033 FDX1P10109 184 aa11.26□□□□□ -0.61
ABCA4-205ENST00000472033 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
ABCA4-205ENST00000472033 NDUFV2P19404 249 aa11.26□□□□□ -0.61
ABCA4-205ENST00000472033 NEUROD2Q15784 382 aa11.24□□□□□ -0.61
ABCA4-205ENST00000472033 RGS20O76081 388 aa11.23□□□□□ -0.61
ABCA4-205ENST00000472033 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
ABCA4-205ENST00000472033 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
ABCA4-205ENST00000472033 URB2Q14146 1524 aaKnown RBP11.23□□□□□ -0.61
ABCA4-205ENST00000472033 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
ABCA4-205ENST00000472033 RSBN1LQ6PCB5 846 aaPredicted RBP11.22□□□□□ -0.61
ABCA4-205ENST00000472033 PRDM9Q9NQV7 894 aa11.22□□□□□ -0.61
ABCA4-205ENST00000472033 ABCC8Q09428 1581 aa11.21□□□□□ -0.61
ABCA4-205ENST00000472033 MSS51Q4VC12 460 aa11.21□□□□□ -0.61
ABCA4-205ENST00000472033 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.61
ABCA4-205ENST00000472033 USB1Q9BQ65 265 aaKnown RBP11.21□□□□□ -0.61
ABCA4-205ENST00000472033 FAM117AQ9C073 453 aa11.21□□□□□ -0.61
ABCA4-205ENST00000472033 C6orf229H3BNL8 230 aa11.2□□□□□ -0.62
ABCA4-205ENST00000472033 PPEF1O14829 653 aaPredicted RBP11.2□□□□□ -0.62
ABCA4-205ENST00000472033 BRPF1P55201 1214 aaPredicted RBP11.2□□□□□ -0.62
ABCA4-205ENST00000472033 MYSM1Q5VVJ2 828 aa11.2□□□□□ -0.62
ABCA4-205ENST00000472033 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
ABCA4-205ENST00000472033 GJA5P36382 358 aa11.19□□□□□ -0.62
ABCA4-205ENST00000472033 RIC3Q7Z5B4 369 aa11.19□□□□□ -0.62
ABCA4-205ENST00000472033 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
ABCA4-205ENST00000472033 SPTLC1O15269 473 aa11.18□□□□□ -0.62
ABCA4-205ENST00000472033 RETREG3Q86VR2 466 aa11.17□□□□□ -0.62
ABCA4-205ENST00000472033 RSPH6AQ9H0K4 717 aa11.17□□□□□ -0.62
ABCA4-205ENST00000472033 TOPBP1Q92547 1522 aa11.16□□□□□ -0.62
ABCA4-205ENST00000472033 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
ABCA4-205ENST00000472033 PLEKHG3A1L390 1219 aa11.15□□□□□ -0.62
ABCA4-205ENST00000472033 MTMR2Q13614 643 aa11.15□□□□□ -0.62
ABCA4-205ENST00000472033 CSPP1Q1MSJ5 1256 aa11.15□□□□□ -0.62
ABCA4-205ENST00000472033 LIMD1Q9UGP4 676 aa11.15□□□□□ -0.62
ABCA4-205ENST00000472033 PCDHB15Q9Y5E8 787 aa11.15□□□□□ -0.62
ABCA4-205ENST00000472033 IFT140Q96RY7 1462 aa11.14□□□□□ -0.63
ABCA4-205ENST00000472033 CLK2P49760 499 aaKnown RBP11.14□□□□□ -0.63
ABCA4-205ENST00000472033 POLR3EQ9NVU0 708 aa11.14□□□□□ -0.63
ABCA4-205ENST00000472033 FCF1Q9Y324 198 aaKnown RBP11.14□□□□□ -0.63
ABCA4-205ENST00000472033 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
ABCA4-205ENST00000472033 MMP16P51512 607 aa11.13□□□□□ -0.63
ABCA4-205ENST00000472033 DXOO77932 396 aaKnown RBP11.12□□□□□ -0.63
ABCA4-205ENST00000472033 JUNDP17535 347 aa11.12□□□□□ -0.63
ABCA4-205ENST00000472033 ZBTB3Q9H5J0 574 aa11.12□□□□□ -0.63
ABCA4-205ENST00000472033 SPDYE5A6NIY4 337 aa11.11□□□□□ -0.63
ABCA4-205ENST00000472033 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
ABCA4-205ENST00000472033 PLA2G2CQ5R387 149 aa11.11□□□□□ -0.63
ABCA4-205ENST00000472033 PRPF38BQ5VTL8 546 aaKnown RBP11.11□□□□□ -0.63
ABCA4-205ENST00000472033 PRR7Q8TB68 274 aa11.11□□□□□ -0.63
ABCA4-205ENST00000472033 CABLES1Q8TDN4 633 aa11.11□□□□□ -0.63
ABCA4-205ENST00000472033 V9GY48 417 aaPredicted RBP11.11□□□□□ -0.63
ABCA4-205ENST00000472033 HRCP23327 699 aa11.1□□□□□ -0.63
ABCA4-205ENST00000472033 SLC19A1P41440 591 aa11.1□□□□□ -0.63
ABCA4-205ENST00000472033 TUSC1Q2TAM9 212 aa11.1□□□□□ -0.63
ABCA4-205ENST00000472033 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
ABCA4-205ENST00000472033 QPCTQ16769 361 aa11.09□□□□□ -0.63
ABCA4-205ENST00000472033 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
ABCA4-205ENST00000472033 NUTM2BA6NNL0 878 aaPredicted RBP11.08□□□□□ -0.64
ABCA4-205ENST00000472033 NUTM2EB1AL46 878 aaPredicted RBP11.08□□□□□ -0.64
ABCA4-205ENST00000472033 SKIV2LQ15477 1246 aaKnown RBP11.08□□□□□ -0.64
ABCA4-205ENST00000472033 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
ABCA4-205ENST00000472033 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
ABCA4-205ENST00000472033 NUTM2AQ8IVF1 878 aaPredicted RBP11.08□□□□□ -0.64
ABCA4-205ENST00000472033 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
ABCA4-205ENST00000472033 ZNF608Q9ULD9 1512 aaPredicted RBP11.07□□□□□ -0.64
ABCA4-205ENST00000472033 CFAP99D6REC4 459 aa11.06□□□□□ -0.64
ABCA4-205ENST00000472033 LILRB3O75022 631 aa11.06□□□□□ -0.64
ABCA4-205ENST00000472033 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms