RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.93■□□□□ 0.78
SSR4-207ENST00000471724 DCCP43146 1447 aa19.93■□□□□ 0.78
SSR4-207ENST00000471724 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
SSR4-207ENST00000471724 TRAK1Q9UPV9 953 aa19.92■□□□□ 0.78
SSR4-207ENST00000471724 MSH6P52701 1360 aa19.91■□□□□ 0.78
SSR4-207ENST00000471724 POGKQ9P215 609 aa19.89■□□□□ 0.77
SSR4-207ENST00000471724 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
SSR4-207ENST00000471724 C14orf37Q86TY3 774 aa19.88■□□□□ 0.77
SSR4-207ENST00000471724 PRAM1Q96QH2 718 aa19.88■□□□□ 0.77
SSR4-207ENST00000471724 USP47Q96K76 1375 aa19.87■□□□□ 0.77
SSR4-207ENST00000471724 PLEKHH1Q9ULM0 1364 aa19.87■□□□□ 0.77
SSR4-207ENST00000471724 CENPJQ9HC77 1338 aaPredicted RBP19.87■□□□□ 0.77
SSR4-207ENST00000471724 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
SSR4-207ENST00000471724 WAPLQ7Z5K2 1190 aa19.85■□□□□ 0.77
SSR4-207ENST00000471724 RBM33Q96EV2 1170 aaKnown RBP19.85■□□□□ 0.77
SSR4-207ENST00000471724 ITSN1Q15811 1721 aa19.83■□□□□ 0.77
SSR4-207ENST00000471724 C19orf44Q9H6X5 657 aa19.83■□□□□ 0.77
SSR4-207ENST00000471724 HSPA1LP34931 641 aa19.82■□□□□ 0.76
SSR4-207ENST00000471724 SAFB2Q14151 953 aaKnown RBP eCLIP19.81■□□□□ 0.76
SSR4-207ENST00000471724 CADPS2Q86UW7 1296 aa19.8■□□□□ 0.76
SSR4-207ENST00000471724 ATF3P18847 181 aa19.79■□□□□ 0.76
SSR4-207ENST00000471724 TULP4Q9NRJ4 1543 aa19.79■□□□□ 0.76
SSR4-207ENST00000471724 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
SSR4-207ENST00000471724 SLAIN2Q9P270 581 aa19.78■□□□□ 0.76
SSR4-207ENST00000471724 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
SSR4-207ENST00000471724 EIF4G2P78344 907 aaKnown RBP eCLIP19.77■□□□□ 0.76
SSR4-207ENST00000471724 TOPAZ1Q8N9V7 1692 aa19.77■□□□□ 0.76
SSR4-207ENST00000471724 RGPD8O14715 1765 aaPredicted RBP19.77■□□□□ 0.76
SSR4-207ENST00000471724 MST1RQ04912 1400 aa19.76■□□□□ 0.75
SSR4-207ENST00000471724 ANKARQ7Z5J8 1434 aa19.76■□□□□ 0.75
SSR4-207ENST00000471724 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
SSR4-207ENST00000471724 KIF1AQ12756 1690 aa19.76■□□□□ 0.75
SSR4-207ENST00000471724 ROBO1Q9Y6N7 1651 aa19.76■□□□□ 0.75
SSR4-207ENST00000471724 ST20-MTHFSA0A0A6YYL1 179 aa19.74■□□□□ 0.75
SSR4-207ENST00000471724 EVC2Q86UK5 1308 aa19.74■□□□□ 0.75
SSR4-207ENST00000471724 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
SSR4-207ENST00000471724 ATP7BP35670 1465 aa19.73■□□□□ 0.75
SSR4-207ENST00000471724 WASLO00401 505 aaPredicted RBP19.72■□□□□ 0.75
SSR4-207ENST00000471724 C1orf167Q5SNV9 1468 aa19.72■□□□□ 0.75
SSR4-207ENST00000471724 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
SSR4-207ENST00000471724 TESK2Q96S53 571 aa19.69■□□□□ 0.74
SSR4-207ENST00000471724 NHSL1Q5SYE7 1610 aa19.69■□□□□ 0.74
SSR4-207ENST00000471724 ATAD2Q6PL18 1390 aa19.68■□□□□ 0.74
SSR4-207ENST00000471724 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
SSR4-207ENST00000471724 SRPK2P78362 688 aaKnown RBP19.67■□□□□ 0.74
SSR4-207ENST00000471724 TMF1P82094 1093 aa19.67■□□□□ 0.74
SSR4-207ENST00000471724 CDK19Q9BWU1 502 aa19.67■□□□□ 0.74
SSR4-207ENST00000471724 PHLPP1O60346 1717 aa19.66■□□□□ 0.74
SSR4-207ENST00000471724 CDCA8Q53HL2 280 aa19.65■□□□□ 0.74
SSR4-207ENST00000471724 AHDC1Q5TGY3 1603 aaPredicted RBP19.65■□□□□ 0.74
SSR4-207ENST00000471724 MYOM1P52179 1685 aa19.65■□□□□ 0.74
SSR4-207ENST00000471724 PRR36Q9H6K5 1346 aa19.63■□□□□ 0.73
SSR4-207ENST00000471724 PUS7Q96PZ0 661 aaKnown RBP19.63■□□□□ 0.73
SSR4-207ENST00000471724 AKAP12Q02952 1782 aa19.62■□□□□ 0.73
SSR4-207ENST00000471724 MED1Q15648 1581 aaPredicted RBP19.62■□□□□ 0.73
SSR4-207ENST00000471724 NINLQ9Y2I6 1382 aa19.62■□□□□ 0.73
SSR4-207ENST00000471724 NUTM2FA1L443 756 aa19.62■□□□□ 0.73
SSR4-207ENST00000471724 PPIP5K1Q6PFW1 1433 aa19.61■□□□□ 0.73
SSR4-207ENST00000471724 BRINP3Q76B58 766 aa19.61■□□□□ 0.73
SSR4-207ENST00000471724 NUDT16Q96DE0 195 aaKnown RBP19.61■□□□□ 0.73
SSR4-207ENST00000471724 CABP2Q9NPB3 220 aa19.6■□□□□ 0.73
SSR4-207ENST00000471724 CCDC61Q9Y6R9 512 aa19.6■□□□□ 0.73
SSR4-207ENST00000471724 MON2Q7Z3U7 1717 aa19.59■□□□□ 0.73
SSR4-207ENST00000471724 ESCO1Q5FWF5 840 aa19.59■□□□□ 0.73
SSR4-207ENST00000471724 COL16A1Q07092 1604 aaPredicted RBP19.58■□□□□ 0.73
SSR4-207ENST00000471724 JCADQ9P266 1359 aa19.58■□□□□ 0.73
SSR4-207ENST00000471724 ORAI2Q96SN7 254 aa19.57■□□□□ 0.72
SSR4-207ENST00000471724 PHF8Q9UPP1 1060 aa19.57■□□□□ 0.72
SSR4-207ENST00000471724 NPHP3Q7Z494 1330 aa19.56■□□□□ 0.72
SSR4-207ENST00000471724 POLR3AO14802 1390 aaPredicted RBP19.56■□□□□ 0.72
SSR4-207ENST00000471724 NRKQ7Z2Y5 1582 aa19.55■□□□□ 0.72
SSR4-207ENST00000471724 TRPM3Q9HCF6 1732 aaPredicted RBP19.55■□□□□ 0.72
SSR4-207ENST00000471724 PXDNQ92626 1479 aa19.54■□□□□ 0.72
SSR4-207ENST00000471724 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
SSR4-207ENST00000471724 PLEKHG3A1L390 1219 aa19.53■□□□□ 0.72
SSR4-207ENST00000471724 NGDNQ8NEJ9 315 aaKnown RBP19.51■□□□□ 0.71
SSR4-207ENST00000471724 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
SSR4-207ENST00000471724 SHPRHQ149N8 1683 aa19.51■□□□□ 0.71
SSR4-207ENST00000471724 SPATA31A6Q5VVP1 1343 aa19.51■□□□□ 0.71
SSR4-207ENST00000471724 ALS2Q96Q42 1657 aa19.5■□□□□ 0.71
SSR4-207ENST00000471724 BRD4O60885 1362 aaPredicted RBP19.5■□□□□ 0.71
SSR4-207ENST00000471724 LRRC59Q96AG4 307 aaKnown RBP19.5■□□□□ 0.71
SSR4-207ENST00000471724 CPSF1Q10570 1443 aaKnown RBP19.5■□□□□ 0.71
SSR4-207ENST00000471724 ACEP12821 1306 aa19.5■□□□□ 0.71
SSR4-207ENST00000471724 KIF7Q2M1P5 1343 aa19.5■□□□□ 0.71
SSR4-207ENST00000471724 CD163L1Q9NR16 1453 aa19.49■□□□□ 0.71
SSR4-207ENST00000471724 CCDC7Q96M83 1385 aa19.49■□□□□ 0.71
SSR4-207ENST00000471724 FOXO3O43524 673 aa19.49■□□□□ 0.71
SSR4-207ENST00000471724 TMC1Q8TDI8 760 aa19.49■□□□□ 0.71
SSR4-207ENST00000471724 CABP1Q9NZU7 370 aa19.49■□□□□ 0.71
SSR4-207ENST00000471724 USP6P35125 1406 aa19.49■□□□□ 0.71
SSR4-207ENST00000471724 ANKRD36BQ8N2N9 1353 aa19.48■□□□□ 0.71
SSR4-207ENST00000471724 TERF2IPQ9NYB0 399 aa19.48■□□□□ 0.71
SSR4-207ENST00000471724 SOS2Q07890 1332 aaPredicted RBP19.48■□□□□ 0.71
SSR4-207ENST00000471724 HDGFL2Q7Z4V5 671 aaPredicted RBP19.47■□□□□ 0.71
SSR4-207ENST00000471724 POLR3GLQ9BT43 218 aa19.47■□□□□ 0.71
SSR4-207ENST00000471724 KIF20BQ96Q89 1820 aa19.46■□□□□ 0.71
SSR4-207ENST00000471724 A0A1W2PP64 1363 aa19.46■□□□□ 0.71
SSR4-207ENST00000471724 SBNO1A3KN83 1393 aa19.46■□□□□ 0.71
SSR4-207ENST00000471724 TNS3Q68CZ2 1445 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms