RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ST20-MTHFSA0A0A6YYL1 179 aa15.96■□□□□ 0.15
NPHP3-ACAD11-201ENST00000471702 REC8O95072 547 aa15.96■□□□□ 0.15
NPHP3-ACAD11-201ENST00000471702 L3MBTL2Q969R5 705 aa15.96■□□□□ 0.15
NPHP3-ACAD11-201ENST00000471702 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.15
NPHP3-ACAD11-201ENST00000471702 CCDC173Q0VFZ6 552 aa15.96■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 BRMS1Q9HCU9 246 aa15.96■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 EVC2Q86UK5 1308 aa15.95■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 KANK4Q5T7N3 995 aaPredicted RBP15.95■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 MAP3K9P80192 1104 aa15.94■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 CDK5RAP3Q96JB5 506 aa15.94■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 TEX35Q5T0J7 233 aa15.94■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 FMNL2Q96PY5 1086 aa15.94■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 CDR1P51861 262 aa15.94■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 KRT18P05783 430 aaKnown RBP15.93■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 SYCP1Q15431 976 aa15.93■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 BCCIPQ9P287 314 aaKnown RBP eCLIP15.93■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 APAF1O14727 1248 aa15.93■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 SDF4Q9BRK5 362 aa15.92■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 LNPKQ9C0E8 428 aa15.92■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 PIP4K2BP78356 416 aa15.92■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 CEBPZQ03701 1054 aaKnown RBP15.92■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 CCDC73Q6ZRK6 1079 aa15.92■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 OLFM4Q6UX06 510 aa15.92■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 TSHZ2Q9NRE2 1034 aa15.92■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 MNS1Q8NEH6 495 aa15.92■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 DNAJC2Q99543 621 aaKnown RBP15.91■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 XBP1P17861 261 aa15.91■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 PDCL3Q9H2J4 239 aa15.91■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 SEPT7Q16181 437 aaKnown RBP15.9■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 DIAPH1O60610 1272 aaKnown RBP15.9■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 CBX1P83916 185 aa15.9■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 RAB3GAP2Q9H2M9 1393 aa15.89■□□□□ 0.14
NPHP3-ACAD11-201ENST00000471702 MATR3P43243 847 aaKnown RBP eCLIP15.89■□□□□ 0.132e-6■■□□□ 13.7
NPHP3-ACAD11-201ENST00000471702 VGFO15240 615 aaPredicted RBP15.89■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 PLCD3Q8N3E9 789 aa15.89■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 GRIPAP1Q4V328 841 aa15.88■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 KIF6Q6ZMV9 814 aa15.88■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 CENPQQ7L2Z9 268 aaPredicted RBP15.88■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 HSP90B2PQ58FF3 399 aa15.88■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 GON4LQ3T8J9 2241 aa15.87■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 PAXIP1Q6ZW49 1069 aaPredicted RBP15.87■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 ZSCAN29Q8IWY8 852 aaPredicted RBP15.87■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 NEBLO76041 1014 aa15.87■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 EXOC6Q8TAG9 804 aa15.87■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 CNNM1Q9NRU3 951 aa15.87■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 H0YHG0 523 aa15.87■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 ERC2O15083 957 aa15.87■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 DDX54Q8TDD1 881 aaKnown RBP15.86■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 TBC1D2BQ9UPU7 963 aa15.86■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 DCTN1Q14203 1278 aa15.86■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 SKOR2Q2VWA4 1001 aaPredicted RBP15.86■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 RNF214Q8ND24 703 aa15.86■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 E9PSI1 815 aa15.85■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 SART3Q15020 963 aaKnown RBP15.85■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 PIBF1Q8WXW3 757 aa15.85■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 PRDM2Q13029 1718 aa15.85■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 ABTB2Q8N961 1025 aa15.85■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 FSD1Q9BTV5 496 aa15.85■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 SMC2O95347 1197 aa15.85■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 PDE4AP27815 886 aa15.85■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 MYO6Q9UM54 1294 aa15.84■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 MPHOSPH10O00566 681 aaKnown RBP15.84■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 CCDC144AA2RUR9 1427 aa15.84■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 DDX19BQ9UMR2 479 aa15.84■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 NLRP6P59044 892 aa15.84■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 RSPH4AQ5TD94 716 aa15.84■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 MAGEC2Q9UBF1 373 aaPredicted RBP15.84■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 ESCO1Q5FWF5 840 aa15.83■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 KIF15Q9NS87 1388 aa15.83■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 SPINK5Q9NQ38 1064 aaPredicted RBP15.83■□□□□ 0.13
NPHP3-ACAD11-201ENST00000471702 INTS3Q68E01 1043 aaKnown RBP15.83■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 HSP90AB4PQ58FF6 505 aa15.83■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 ENOX2Q16206 610 aaKnown RBP15.82■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 CENPHQ9H3R5 247 aa15.82■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 SLC3A2P08195 630 aaKnown RBP15.82■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 ANKRD18AQ8IVF6 992 aa15.81■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 MYBBP1AQ9BQG0 1328 aaKnown RBP15.81■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 SIL1Q9H173 461 aa15.81■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 PRKCSHP14314 528 aaPredicted RBP15.81■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 TANGO6Q9C0B7 1094 aa15.81■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 TXLNAP40222 546 aa15.81■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 NAT10Q9H0A0 1025 aaKnown RBP15.81■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 FAM69CQ0P6D2 419 aa15.81■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 SOGA1O94964 1423 aa15.8■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 AXDND1Q5T1B0 1012 aaPredicted RBP15.8■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 SSBP05455 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 WASHC2AQ641Q2 1341 aa15.8■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 GSE1Q14687 1217 aa15.8■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 MYL6BP14649 208 aa15.8■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 PDE3BQ13370 1112 aa15.8■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 STK3Q13188 491 aa15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 GGNBP2Q9H3C7 697 aa15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 FAM177A1Q8N128 213 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms