RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PUS10Q3MIT2 529 aaKnown RBP4.28□□□□□ -1.72
UBXN4-207ENST00000471246 RYDENQ9NUL5 291 aaKnown RBP4.28□□□□□ -1.72
UBXN4-207ENST00000471246 ZBTB24O43167 697 aaPredicted RBP4.27□□□□□ -1.73
UBXN4-207ENST00000471246 SLC10A3P09131 477 aa4.27□□□□□ -1.73
UBXN4-207ENST00000471246 PDIA6Q15084 440 aa4.27□□□□□ -1.73
UBXN4-207ENST00000471246 FAM160A2Q8N612 972 aaPredicted RBP4.27□□□□□ -1.73
UBXN4-207ENST00000471246 ZFP42Q96MM3 310 aa4.27□□□□□ -1.73
UBXN4-207ENST00000471246 SOBPA7XYQ1 873 aa4.26□□□□□ -1.73
UBXN4-207ENST00000471246 MSTNO14793 375 aa4.26□□□□□ -1.73
UBXN4-207ENST00000471246 ITGB2P05107 769 aa4.26□□□□□ -1.73
UBXN4-207ENST00000471246 ZNF385CQ66K41 422 aaPredicted RBP4.26□□□□□ -1.73
UBXN4-207ENST00000471246 KANK3Q6NY19 840 aa4.26□□□□□ -1.73
UBXN4-207ENST00000471246 CADPS2Q86UW7 1296 aa4.26□□□□□ -1.73
UBXN4-207ENST00000471246 NPDC1Q9NQX5 325 aaPredicted RBP4.26□□□□□ -1.73
UBXN4-207ENST00000471246 CAPN5O15484 640 aaPredicted RBP4.25□□□□□ -1.73
UBXN4-207ENST00000471246 TRIM32Q13049 653 aa4.25□□□□□ -1.73
UBXN4-207ENST00000471246 THAP11Q96EK4 314 aa4.25□□□□□ -1.73
UBXN4-207ENST00000471246 SPOCK3Q9BQ16 436 aa4.25□□□□□ -1.73
UBXN4-207ENST00000471246 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
UBXN4-207ENST00000471246 PRDM9Q9NQV7 894 aa4.25□□□□□ -1.73
UBXN4-207ENST00000471246 DNAJB2P25686 324 aa4.24□□□□□ -1.73
UBXN4-207ENST00000471246 PLA2G4EQ3MJ16 856 aa4.24□□□□□ -1.73
UBXN4-207ENST00000471246 CNTNAP3BQ96NU0 1288 aa4.24□□□□□ -1.73
UBXN4-207ENST00000471246 CNTNAP3Q9BZ76 1288 aa4.24□□□□□ -1.73
UBXN4-207ENST00000471246 TMEM134Q9H6X4 195 aa4.24□□□□□ -1.73
UBXN4-207ENST00000471246 GRXCR2A6NFK2 248 aa4.23□□□□□ -1.73
UBXN4-207ENST00000471246 ARHGEF15O94989 841 aa4.23□□□□□ -1.73
UBXN4-207ENST00000471246 PROCP04070 461 aa4.23□□□□□ -1.73
UBXN4-207ENST00000471246 OSBPP22059 807 aa4.23□□□□□ -1.73
UBXN4-207ENST00000471246 KRTAP19-1Q8IUB9 90 aa4.23□□□□□ -1.73
UBXN4-207ENST00000471246 GPR161Q8N6U8 529 aaKnown RBP4.23□□□□□ -1.73
UBXN4-207ENST00000471246 REPIN1Q9BWE0 567 aaKnown RBP4.23□□□□□ -1.73
UBXN4-207ENST00000471246 K7ELQ4 463 aaPredicted RBP4.22□□□□□ -1.73
UBXN4-207ENST00000471246 GTPBP6O43824 516 aaPredicted RBP4.22□□□□□ -1.73
UBXN4-207ENST00000471246 PPFIA3O75145 1194 aa4.22□□□□□ -1.73
UBXN4-207ENST00000471246 ALDH1A1P00352 501 aa4.22□□□□□ -1.73
UBXN4-207ENST00000471246 RC3H1Q5TC82 1133 aaKnown RBP4.22□□□□□ -1.73
UBXN4-207ENST00000471246 WHAMMQ8TF30 809 aa4.22□□□□□ -1.73
UBXN4-207ENST00000471246 SKOR1P84550 965 aa4.21□□□□□ -1.74
UBXN4-207ENST00000471246 SPDYE16A6NNV3 312 aaPredicted RBP4.2□□□□□ -1.74
UBXN4-207ENST00000471246 MARSP56192 900 aaKnown RBP4.2□□□□□ -1.74
UBXN4-207ENST00000471246 SVOPQ8N4V2 548 aa4.2□□□□□ -1.74
UBXN4-207ENST00000471246 BBXQ8WY36 941 aaPredicted RBP4.2□□□□□ -1.74
UBXN4-207ENST00000471246 MORN1Q5T089 497 aa4.19□□□□□ -1.74
UBXN4-207ENST00000471246 RCCD1A6NED2 376 aa4.18□□□□□ -1.74
UBXN4-207ENST00000471246 FMNL1O95466 1100 aaPredicted RBP4.18□□□□□ -1.74
UBXN4-207ENST00000471246 SCARF2Q96GP6 870 aaPredicted RBP4.18□□□□□ -1.74
UBXN4-207ENST00000471246 DCAF5Q96JK2 942 aa4.18□□□□□ -1.74
UBXN4-207ENST00000471246 SIAH2O43255 324 aa4.17□□□□□ -1.74
UBXN4-207ENST00000471246 MRPL14Q6P1L8 145 aaKnown RBP4.17□□□□□ -1.74
UBXN4-207ENST00000471246 PURBQ96QR8 312 aaKnown RBP4.17□□□□□ -1.74
UBXN4-207ENST00000471246 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.17□□□□□ -1.74
UBXN4-207ENST00000471246 FECHP22830 423 aa4.16□□□□□ -1.74
UBXN4-207ENST00000471246 MSS51Q4VC12 460 aa4.16□□□□□ -1.74
UBXN4-207ENST00000471246 BRICD5Q6PL45 260 aa4.16□□□□□ -1.74
UBXN4-207ENST00000471246 GALNT6Q8NCL4 622 aa4.16□□□□□ -1.74
UBXN4-207ENST00000471246 COL25A1Q9BXS0 654 aaPredicted RBP4.16□□□□□ -1.74
UBXN4-207ENST00000471246 SLC27A5Q9Y2P5 690 aa4.16□□□□□ -1.74
UBXN4-207ENST00000471246 RNFT1Q5M7Z0 435 aa4.15□□□□□ -1.75
UBXN4-207ENST00000471246 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
UBXN4-207ENST00000471246 RBM46Q8TBY0 533 aaKnown RBP4.15□□□□□ -1.75
UBXN4-207ENST00000471246 ADGRG1Q9Y653 693 aa4.15□□□□□ -1.75
UBXN4-207ENST00000471246 SLURP2P0DP57 97 aa4.14□□□□□ -1.75
UBXN4-207ENST00000471246 WNT7BP56706 349 aa4.14□□□□□ -1.75
UBXN4-207ENST00000471246 SCARF1Q14162 830 aa4.14□□□□□ -1.75
UBXN4-207ENST00000471246 PAXIP1Q6ZW49 1069 aaPredicted RBP4.14□□□□□ -1.75
UBXN4-207ENST00000471246 SPRYD3Q8NCJ5 442 aa4.14□□□□□ -1.75
UBXN4-207ENST00000471246 CFAP44Q96MT7 982 aa4.14□□□□□ -1.75
UBXN4-207ENST00000471246 WASF2Q9Y6W5 498 aa4.14□□□□□ -1.75
UBXN4-207ENST00000471246 BAG6P46379 1132 aa4.13□□□□□ -1.75
UBXN4-207ENST00000471246 FAM161AQ3B820 660 aa4.13□□□□□ -1.75
UBXN4-207ENST00000471246 RNF19BQ6ZMZ0 732 aa4.13□□□□□ -1.75
UBXN4-207ENST00000471246 SALL2Q9Y467 1007 aaPredicted RBP4.13□□□□□ -1.75
UBXN4-207ENST00000471246 FURINP09958 794 aa4.12□□□□□ -1.75
UBXN4-207ENST00000471246 MMP16P51512 607 aa4.12□□□□□ -1.75
UBXN4-207ENST00000471246 FUT2Q10981 343 aa4.12□□□□□ -1.75
UBXN4-207ENST00000471246 MAN1A2O60476 641 aa4.11□□□□□ -1.75
UBXN4-207ENST00000471246 ATP6V1AP38606 617 aa4.1□□□□□ -1.75
UBXN4-207ENST00000471246 LYPD4Q6UWN0 246 aa4.1□□□□□ -1.75
UBXN4-207ENST00000471246 GOLGA2P5Q9HBQ8 144 aa4.1□□□□□ -1.75
UBXN4-207ENST00000471246 CNTNAP5Q8WYK1 1306 aa4.1□□□□□ -1.75
UBXN4-207ENST00000471246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.09□□□□□ -1.75
UBXN4-207ENST00000471246 TIMP2P16035 220 aa4.09□□□□□ -1.75
UBXN4-207ENST00000471246 ITGB7P26010 798 aa4.09□□□□□ -1.75
UBXN4-207ENST00000471246 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
UBXN4-207ENST00000471246 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
UBXN4-207ENST00000471246 CCDC24Q8N4L8 307 aa4.08□□□□□ -1.76
UBXN4-207ENST00000471246 EHBP1Q8NDI1 1231 aa4.08□□□□□ -1.76
UBXN4-207ENST00000471246 NANOS1Q8WY41 292 aaKnown RBP4.08□□□□□ -1.76
UBXN4-207ENST00000471246 DXOO77932 396 aaKnown RBP4.07□□□□□ -1.76
UBXN4-207ENST00000471246 PHF20L1A8MW92 1017 aa4.06□□□□□ -1.76
UBXN4-207ENST00000471246 WDR4P57081 412 aaKnown RBP4.06□□□□□ -1.76
UBXN4-207ENST00000471246 NNTQ13423 1086 aa4.06□□□□□ -1.76
UBXN4-207ENST00000471246 C6orf118Q5T5N4 469 aa4.06□□□□□ -1.76
UBXN4-207ENST00000471246 RSPH4AQ5TD94 716 aa4.06□□□□□ -1.76
UBXN4-207ENST00000471246 KLF16Q9BXK1 252 aaPredicted RBP4.06□□□□□ -1.76
UBXN4-207ENST00000471246 DNMT3LQ9UJW3 386 aa4.06□□□□□ -1.76
UBXN4-207ENST00000471246 ARIH1Q9Y4X5 557 aaPredicted RBP4.06□□□□□ -1.76
UBXN4-207ENST00000471246 ADAMTS2O95450 1211 aa4.05□□□□□ -1.76
UBXN4-207ENST00000471246 CELA2BP08218 269 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms