RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 ZNF335Q9H4Z2 1342 aaPredicted RBP16.28■□□□□ 0.2
FN1-217ENST00000471193 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
FN1-217ENST00000471193 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.2
FN1-217ENST00000471193 ADGRL3Q9HAR2 1447 aa16.27■□□□□ 0.19
FN1-217ENST00000471193 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
FN1-217ENST00000471193 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
FN1-217ENST00000471193 TMF1P82094 1093 aa16.25■□□□□ 0.19
FN1-217ENST00000471193 CCDC7Q96M83 1385 aa16.25■□□□□ 0.19
FN1-217ENST00000471193 LRRC7Q96NW7 1537 aa16.24■□□□□ 0.19
FN1-217ENST00000471193 MINK1Q8N4C8 1332 aaPredicted RBP16.24■□□□□ 0.19
FN1-217ENST00000471193 LTBP4Q8N2S1 1624 aa16.24■□□□□ 0.19
FN1-217ENST00000471193 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
FN1-217ENST00000471193 KIF7Q2M1P5 1343 aa16.23■□□□□ 0.19
FN1-217ENST00000471193 C11orf95C9JLR9 678 aaPredicted RBP16.23■□□□□ 0.19
FN1-217ENST00000471193 XIRP1Q702N8 1843 aaKnown RBP16.23■□□□□ 0.19
FN1-217ENST00000471193 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
FN1-217ENST00000471193 WASHC2AQ641Q2 1341 aa16.22■□□□□ 0.19
FN1-217ENST00000471193 EVC2Q86UK5 1308 aa16.22■□□□□ 0.19
FN1-217ENST00000471193 MYOM1P52179 1685 aa16.22■□□□□ 0.19
FN1-217ENST00000471193 FMN2Q9NZ56 1722 aa16.22■□□□□ 0.19
FN1-217ENST00000471193 PROSER2Q86WR7 435 aaPredicted RBP16.21■□□□□ 0.19
FN1-217ENST00000471193 DCCP43146 1447 aa16.19■□□□□ 0.18
FN1-217ENST00000471193 TOPAZ1Q8N9V7 1692 aa16.19■□□□□ 0.18
FN1-217ENST00000471193 ATP7BP35670 1465 aa16.19■□□□□ 0.18
FN1-217ENST00000471193 WASLO00401 505 aaPredicted RBP16.19■□□□□ 0.18
FN1-217ENST00000471193 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
FN1-217ENST00000471193 RBM33Q96EV2 1170 aaKnown RBP16.18■□□□□ 0.18
FN1-217ENST00000471193 PUS7Q96PZ0 661 aaKnown RBP16.18■□□□□ 0.18
FN1-217ENST00000471193 USP32Q8NFA0 1604 aa16.18■□□□□ 0.18
FN1-217ENST00000471193 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
FN1-217ENST00000471193 CDK19Q9BWU1 502 aa16.17■□□□□ 0.18
FN1-217ENST00000471193 ANKARQ7Z5J8 1434 aa16.17■□□□□ 0.18
FN1-217ENST00000471193 SRPK2P78362 688 aaKnown RBP16.15■□□□□ 0.18
FN1-217ENST00000471193 CABP2Q9NPB3 220 aa16.15■□□□□ 0.18
FN1-217ENST00000471193 MSH6P52701 1360 aa16.14■□□□□ 0.17
FN1-217ENST00000471193 ITSN1Q15811 1721 aa16.14■□□□□ 0.17
FN1-217ENST00000471193 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
FN1-217ENST00000471193 PRR36Q9H6K5 1346 aa16.14■□□□□ 0.17
FN1-217ENST00000471193 NINLQ9Y2I6 1382 aa16.13■□□□□ 0.17
FN1-217ENST00000471193 POLR3GLQ9BT43 218 aa16.13■□□□□ 0.17
FN1-217ENST00000471193 C19orf44Q9H6X5 657 aa16.13■□□□□ 0.17
FN1-217ENST00000471193 MST1RQ04912 1400 aa16.11■□□□□ 0.17
FN1-217ENST00000471193 PPIP5K1Q6PFW1 1433 aa16.11■□□□□ 0.17
FN1-217ENST00000471193 NUDT16Q96DE0 195 aaKnown RBP16.1■□□□□ 0.17
FN1-217ENST00000471193 IQSEC2Q5JU85 1478 aa16.09■□□□□ 0.17
FN1-217ENST00000471193 C1orf167Q5SNV9 1468 aa16.09■□□□□ 0.17
FN1-217ENST00000471193 CD163L1Q9NR16 1453 aa16.09■□□□□ 0.17
FN1-217ENST00000471193 RGPD8O14715 1765 aaPredicted RBP16.08■□□□□ 0.17
FN1-217ENST00000471193 ATF3P18847 181 aa16.07■□□□□ 0.16
FN1-217ENST00000471193 CADPS2Q86UW7 1296 aa16.07■□□□□ 0.16
FN1-217ENST00000471193 CCDC61Q9Y6R9 512 aa16.07■□□□□ 0.16
FN1-217ENST00000471193 ANKRD36BQ8N2N9 1353 aa16.07■□□□□ 0.16
FN1-217ENST00000471193 KIF1AQ12756 1690 aa16.07■□□□□ 0.16
FN1-217ENST00000471193 AKAP12Q02952 1782 aa16.06■□□□□ 0.16
FN1-217ENST00000471193 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
FN1-217ENST00000471193 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
FN1-217ENST00000471193 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
FN1-217ENST00000471193 A0A1W2PP64 1363 aa16.05■□□□□ 0.16
FN1-217ENST00000471193 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
FN1-217ENST00000471193 SLC12A5Q9H2X9 1139 aa16.05■□□□□ 0.16
FN1-217ENST00000471193 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
FN1-217ENST00000471193 CPSF1Q10570 1443 aaKnown RBP16.04■□□□□ 0.16
FN1-217ENST00000471193 POLR3AO14802 1390 aaPredicted RBP16.04■□□□□ 0.16
FN1-217ENST00000471193 CABP1Q9NZU7 370 aa16.04■□□□□ 0.16
FN1-217ENST00000471193 PLEKHG3A1L390 1219 aa16.03■□□□□ 0.16
FN1-217ENST00000471193 PANK3Q9H999 370 aa16.02■□□□□ 0.16
FN1-217ENST00000471193 NSD3Q9BZ95 1437 aa16.01■□□□□ 0.15
FN1-217ENST00000471193 TERF2IPQ9NYB0 399 aa16■□□□□ 0.15
FN1-217ENST00000471193 PHF8Q9UPP1 1060 aa16■□□□□ 0.15
FN1-217ENST00000471193 USP6P35125 1406 aa16■□□□□ 0.15
FN1-217ENST00000471193 ACEP12821 1306 aa15.99■□□□□ 0.15
FN1-217ENST00000471193 ESCO1Q5FWF5 840 aa15.99■□□□□ 0.15
FN1-217ENST00000471193 HDGFL2Q7Z4V5 671 aaPredicted RBP15.99■□□□□ 0.15
FN1-217ENST00000471193 ORAI2Q96SN7 254 aa15.99■□□□□ 0.15
FN1-217ENST00000471193 EDC4Q6P2E9 1401 aaKnown RBP15.99■□□□□ 0.15
FN1-217ENST00000471193 PER1O15534 1290 aaPredicted RBP15.98■□□□□ 0.15
FN1-217ENST00000471193 PMFBP1Q8TBY8 1022 aa15.98■□□□□ 0.15
FN1-217ENST00000471193 CARD14Q9BXL6 1004 aa15.98■□□□□ 0.15
FN1-217ENST00000471193 KTN1Q86UP2 1357 aaKnown RBP15.98■□□□□ 0.15
FN1-217ENST00000471193 SSH2Q76I76 1423 aa15.97■□□□□ 0.15
FN1-217ENST00000471193 SLAIN2Q9P270 581 aa15.97■□□□□ 0.15
FN1-217ENST00000471193 NHSL1Q5SYE7 1610 aa15.97■□□□□ 0.15
FN1-217ENST00000471193 ROBO1Q9Y6N7 1651 aa15.96■□□□□ 0.15
FN1-217ENST00000471193 DIEXFQ68CQ4 756 aaKnown RBP15.96■□□□□ 0.15
FN1-217ENST00000471193 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
FN1-217ENST00000471193 NGDNQ8NEJ9 315 aaKnown RBP15.96■□□□□ 0.15
FN1-217ENST00000471193 CERKQ8TCT0 537 aa15.96■□□□□ 0.15
FN1-217ENST00000471193 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
FN1-217ENST00000471193 TRPM3Q9HCF6 1732 aaPredicted RBP15.96■□□□□ 0.15
FN1-217ENST00000471193 KIF20BQ96Q89 1820 aa15.95■□□□□ 0.14
FN1-217ENST00000471193 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
FN1-217ENST00000471193 NPC1L1Q9UHC9 1359 aa15.95■□□□□ 0.14
FN1-217ENST00000471193 PXDNQ92626 1479 aa15.94■□□□□ 0.14
FN1-217ENST00000471193 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
FN1-217ENST00000471193 AHDC1Q5TGY3 1603 aaPredicted RBP15.94■□□□□ 0.14
FN1-217ENST00000471193 KNSTRNQ9Y448 316 aa15.93■□□□□ 0.14
FN1-217ENST00000471193 PIK3C2AO00443 1686 aa15.92■□□□□ 0.14
FN1-217ENST00000471193 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
FN1-217ENST00000471193 NSD2O96028 1365 aa15.92■□□□□ 0.14
FN1-217ENST00000471193 AMER1Q5JTC6 1135 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms