RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
TGFBR3-206ENST00000470600 ROBO1Q9Y6N7 1651 aa12.57□□□□□ -0.4
TGFBR3-206ENST00000470600 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
TGFBR3-206ENST00000470600 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
TGFBR3-206ENST00000470600 PROSER2Q86WR7 435 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-206ENST00000470600 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
TGFBR3-206ENST00000470600 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-206ENST00000470600 AHDC1Q5TGY3 1603 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-206ENST00000470600 ATP7BP35670 1465 aa12.53□□□□□ -0.4
TGFBR3-206ENST00000470600 C1orf167Q5SNV9 1468 aa12.53□□□□□ -0.4
TGFBR3-206ENST00000470600 BCANQ96GW7 911 aa12.52□□□□□ -0.41
TGFBR3-206ENST00000470600 CCER1Q8TC90 406 aaPredicted RBP12.51□□□□□ -0.41
TGFBR3-206ENST00000470600 STK26Q9P289 416 aa12.51□□□□□ -0.41
TGFBR3-206ENST00000470600 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
TGFBR3-206ENST00000470600 FBXO41Q8TF61 875 aa12.5□□□□□ -0.41
TGFBR3-206ENST00000470600 PRAM1Q96QH2 718 aa12.5□□□□□ -0.41
TGFBR3-206ENST00000470600 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
TGFBR3-206ENST00000470600 PRR36Q9H6K5 1346 aa12.5□□□□□ -0.41
TGFBR3-206ENST00000470600 MSH6P52701 1360 aa12.5□□□□□ -0.41
TGFBR3-206ENST00000470600 TRPM3Q9HCF6 1732 aaPredicted RBP12.49□□□□□ -0.41
TGFBR3-206ENST00000470600 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
TGFBR3-206ENST00000470600 C19orf44Q9H6X5 657 aa12.49□□□□□ -0.41
TGFBR3-206ENST00000470600 MYOM1P52179 1685 aa12.48□□□□□ -0.41
TGFBR3-206ENST00000470600 PXDNQ92626 1479 aa12.47□□□□□ -0.41
TGFBR3-206ENST00000470600 TESK2Q96S53 571 aa12.47□□□□□ -0.41
TGFBR3-206ENST00000470600 KIF1AQ12756 1690 aa12.47□□□□□ -0.41
TGFBR3-206ENST00000470600 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.41
TGFBR3-206ENST00000470600 ITSN1Q15811 1721 aa12.46□□□□□ -0.41
TGFBR3-206ENST00000470600 CRYBG1Q9Y4K1 1723 aa12.46□□□□□ -0.41
TGFBR3-206ENST00000470600 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
TGFBR3-206ENST00000470600 NRKQ7Z2Y5 1582 aa12.46□□□□□ -0.42
TGFBR3-206ENST00000470600 BRINP3Q76B58 766 aa12.45□□□□□ -0.42
TGFBR3-206ENST00000470600 PHLPP1O60346 1717 aa12.45□□□□□ -0.42
TGFBR3-206ENST00000470600 UBAP1LF5GYI3 381 aa12.44□□□□□ -0.42
TGFBR3-206ENST00000470600 MARF1Q9Y4F3 1742 aaKnown RBP12.44□□□□□ -0.42
TGFBR3-206ENST00000470600 CD163L1Q9NR16 1453 aa12.44□□□□□ -0.42
TGFBR3-206ENST00000470600 ALS2Q96Q42 1657 aa12.44□□□□□ -0.42
TGFBR3-206ENST00000470600 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
TGFBR3-206ENST00000470600 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
TGFBR3-206ENST00000470600 SHPRHQ149N8 1683 aa12.43□□□□□ -0.42
TGFBR3-206ENST00000470600 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
TGFBR3-206ENST00000470600 SLAIN2Q9P270 581 aa12.43□□□□□ -0.42
TGFBR3-206ENST00000470600 COL22A1Q8NFW1 1626 aaPredicted RBP12.43□□□□□ -0.42
TGFBR3-206ENST00000470600 USP47Q96K76 1375 aa12.43□□□□□ -0.42
TGFBR3-206ENST00000470600 ABCA3Q99758 1704 aa12.42□□□□□ -0.42
TGFBR3-206ENST00000470600 SAFB2Q14151 953 aaKnown RBP eCLIP12.42□□□□□ -0.42
TGFBR3-206ENST00000470600 MINK1Q8N4C8 1332 aaPredicted RBP12.41□□□□□ -0.42
TGFBR3-206ENST00000470600 WASLO00401 505 aaPredicted RBP12.41□□□□□ -0.42
TGFBR3-206ENST00000470600 MON2Q7Z3U7 1717 aa12.41□□□□□ -0.42
TGFBR3-206ENST00000470600 ORAI2Q96SN7 254 aa12.41□□□□□ -0.42
TGFBR3-206ENST00000470600 HIRIP3Q9BW71 556 aaPredicted RBP12.41□□□□□ -0.42
TGFBR3-206ENST00000470600 DISP3Q9P2K9 1392 aa12.41□□□□□ -0.42
TGFBR3-206ENST00000470600 SSH2Q76I76 1423 aa12.4□□□□□ -0.42
TGFBR3-206ENST00000470600 TOM1O60784 492 aa12.4□□□□□ -0.42
TGFBR3-206ENST00000470600 CARD11Q9BXL7 1154 aa12.4□□□□□ -0.42
TGFBR3-206ENST00000470600 USP54Q70EL1 1684 aa12.39□□□□□ -0.43
TGFBR3-206ENST00000470600 HSPA1LP34931 641 aa12.39□□□□□ -0.43
TGFBR3-206ENST00000470600 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
TGFBR3-206ENST00000470600 DDX17Q92841 729 aaKnown RBP12.38□□□□□ -0.43
TGFBR3-206ENST00000470600 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
TGFBR3-206ENST00000470600 LRP6O75581 1613 aa12.37□□□□□ -0.43
TGFBR3-206ENST00000470600 ST20-MTHFSA0A0A6YYL1 179 aa12.37□□□□□ -0.43
TGFBR3-206ENST00000470600 EIF3AQ14152 1382 aaKnown RBP12.37□□□□□ -0.43
TGFBR3-206ENST00000470600 MED1Q15648 1581 aaPredicted RBP12.37□□□□□ -0.43
TGFBR3-206ENST00000470600 PIK3C2AO00443 1686 aa12.36□□□□□ -0.43
TGFBR3-206ENST00000470600 ATF3P18847 181 aa12.36□□□□□ -0.43
TGFBR3-206ENST00000470600 PIP4K2BP78356 416 aa12.36□□□□□ -0.43
TGFBR3-206ENST00000470600 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
TGFBR3-206ENST00000470600 POGKQ9P215 609 aa12.36□□□□□ -0.43
TGFBR3-206ENST00000470600 CPSF1Q10570 1443 aaKnown RBP12.36□□□□□ -0.43
TGFBR3-206ENST00000470600 PLEKHG3A1L390 1219 aa12.34□□□□□ -0.43
TGFBR3-206ENST00000470600 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.43
TGFBR3-206ENST00000470600 PNPLA6Q8IY17 1366 aa12.33□□□□□ -0.44
TGFBR3-206ENST00000470600 NUTM2FA1L443 756 aa12.33□□□□□ -0.44
TGFBR3-206ENST00000470600 C11orf95C9JLR9 678 aaPredicted RBP12.33□□□□□ -0.44
TGFBR3-206ENST00000470600 C14orf37Q86TY3 774 aa12.33□□□□□ -0.44
TGFBR3-206ENST00000470600 NUDT16Q96DE0 195 aaKnown RBP12.33□□□□□ -0.44
TGFBR3-206ENST00000470600 PPIP5K1Q6PFW1 1433 aa12.33□□□□□ -0.44
TGFBR3-206ENST00000470600 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
TGFBR3-206ENST00000470600 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
TGFBR3-206ENST00000470600 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-206ENST00000470600 PHF8Q9UPP1 1060 aa12.31□□□□□ -0.44
TGFBR3-206ENST00000470600 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
TGFBR3-206ENST00000470600 USP6P35125 1406 aa12.3□□□□□ -0.44
TGFBR3-206ENST00000470600 TNS3Q68CZ2 1445 aa12.3□□□□□ -0.44
TGFBR3-206ENST00000470600 EVC2Q86UK5 1308 aa12.29□□□□□ -0.44
TGFBR3-206ENST00000470600 ATAD2Q6PL18 1390 aa12.29□□□□□ -0.44
TGFBR3-206ENST00000470600 SLIT3O75094 1523 aa12.28□□□□□ -0.44
TGFBR3-206ENST00000470600 FOXO3O43524 673 aa12.28□□□□□ -0.44
TGFBR3-206ENST00000470600 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
TGFBR3-206ENST00000470600 PMFBP1Q8TBY8 1022 aa12.28□□□□□ -0.44
TGFBR3-206ENST00000470600 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
TGFBR3-206ENST00000470600 ACEP12821 1306 aa12.28□□□□□ -0.44
TGFBR3-206ENST00000470600 SPATA31A3Q5VYP0 1347 aa12.28□□□□□ -0.44
TGFBR3-206ENST00000470600 NPHP3Q7Z494 1330 aa12.28□□□□□ -0.44
TGFBR3-206ENST00000470600 A0A1W2PP64 1363 aa12.27□□□□□ -0.45
TGFBR3-206ENST00000470600 JCADQ9P266 1359 aa12.27□□□□□ -0.45
TGFBR3-206ENST00000470600 XPCQ01831 940 aaPredicted RBP12.26□□□□□ -0.45
TGFBR3-206ENST00000470600 NFAT5O94916 1531 aa12.26□□□□□ -0.45
TGFBR3-206ENST00000470600 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms