RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 LRPPRCP42704 1394 aaKnown RBP21.47■■□□□ 1.03
CDC42SE1-203ENST00000470278 MST1RQ04912 1400 aa21.46■■□□□ 1.03
CDC42SE1-203ENST00000470278 YTHDC2Q9H6S0 1430 aaKnown RBP21.46■■□□□ 1.03
CDC42SE1-203ENST00000470278 AMOTL2Q9Y2J4 779 aa21.45■■□□□ 1.02
CDC42SE1-203ENST00000470278 C19orf44Q9H6X5 657 aa21.44■■□□□ 1.02
CDC42SE1-203ENST00000470278 ABCC11Q96J66 1382 aa21.44■■□□□ 1.02
CDC42SE1-203ENST00000470278 DLC1Q96QB1 1528 aa21.44■■□□□ 1.02
CDC42SE1-203ENST00000470278 BRINP3Q76B58 766 aa21.43■■□□□ 1.02
CDC42SE1-203ENST00000470278 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
CDC42SE1-203ENST00000470278 CADPS2Q86UW7 1296 aa21.41■■□□□ 1.02
CDC42SE1-203ENST00000470278 ADGRL3Q9HAR2 1447 aa21.4■■□□□ 1.02
CDC42SE1-203ENST00000470278 GPRASP1Q5JY77 1395 aa21.39■■□□□ 1.02
CDC42SE1-203ENST00000470278 ROBO2Q9HCK4 1378 aa21.39■■□□□ 1.02
CDC42SE1-203ENST00000470278 ARHGEF28Q8N1W1 1705 aaKnown RBP21.39■■□□□ 1.01
CDC42SE1-203ENST00000470278 TMEM132EQ6IEE7 984 aa21.39■■□□□ 1.01
CDC42SE1-203ENST00000470278 SPATA31A6Q5VVP1 1343 aa21.38■■□□□ 1.01
CDC42SE1-203ENST00000470278 NBPF8Q3BBV2 869 aa21.38■■□□□ 1.01
CDC42SE1-203ENST00000470278 C14orf37Q86TY3 774 aa21.38■■□□□ 1.01
CDC42SE1-203ENST00000470278 SIRT1Q96EB6 747 aa21.36■■□□□ 1.01
CDC42SE1-203ENST00000470278 ATF3P18847 181 aa21.35■■□□□ 1.01
CDC42SE1-203ENST00000470278 ROCK2O75116 1388 aaKnown RBP21.35■■□□□ 1.01
CDC42SE1-203ENST00000470278 NBPF1Q3BBV0 1214 aa21.33■■□□□ 1.01
CDC42SE1-203ENST00000470278 STK26Q9P289 416 aa21.32■■□□□ 1
CDC42SE1-203ENST00000470278 ADGRB2O60241 1585 aa21.31■■□□□ 1
CDC42SE1-203ENST00000470278 CDC42BPGQ6DT37 1551 aa21.31■■□□□ 1
CDC42SE1-203ENST00000470278 DDX17Q92841 729 aaKnown RBP21.3■■□□□ 1
CDC42SE1-203ENST00000470278 C1orf167Q5SNV9 1468 aa21.29■■□□□ 1
CDC42SE1-203ENST00000470278 PNPLA6Q8IY17 1366 aa21.29■■□□□ 1
CDC42SE1-203ENST00000470278 PLEKHH1Q9ULM0 1364 aa21.28■■□□□ 1
CDC42SE1-203ENST00000470278 TRAK1Q9UPV9 953 aa21.27■■□□□ 1
CDC42SE1-203ENST00000470278 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
CDC42SE1-203ENST00000470278 EIF3AQ14152 1382 aaKnown RBP21.25■□□□□ 0.99
CDC42SE1-203ENST00000470278 PRAM1Q96QH2 718 aa21.25■□□□□ 0.99
CDC42SE1-203ENST00000470278 QRICH2Q9H0J4 1663 aa21.24■□□□□ 0.99
CDC42SE1-203ENST00000470278 WAPLQ7Z5K2 1190 aa21.24■□□□□ 0.99
CDC42SE1-203ENST00000470278 COL22A1Q8NFW1 1626 aaPredicted RBP21.24■□□□□ 0.99
CDC42SE1-203ENST00000470278 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
CDC42SE1-203ENST00000470278 FMN2Q9NZ56 1722 aa21.21■□□□□ 0.99
CDC42SE1-203ENST00000470278 NUTM2BA6NNL0 878 aaPredicted RBP21.21■□□□□ 0.99
CDC42SE1-203ENST00000470278 NUTM2EB1AL46 878 aaPredicted RBP21.21■□□□□ 0.99
CDC42SE1-203ENST00000470278 MEX3CQ5U5Q3 659 aaKnown RBP21.21■□□□□ 0.99
CDC42SE1-203ENST00000470278 ZNF772Q68DY9 489 aaPredicted RBP21.21■□□□□ 0.99
CDC42SE1-203ENST00000470278 NUTM2AQ8IVF1 878 aaPredicted RBP21.21■□□□□ 0.99
CDC42SE1-203ENST00000470278 POGKQ9P215 609 aa21.21■□□□□ 0.99
CDC42SE1-203ENST00000470278 AFF2P51816 1311 aa21.21■□□□□ 0.99
CDC42SE1-203ENST00000470278 RGS12O14924 1447 aa21.21■□□□□ 0.99
CDC42SE1-203ENST00000470278 UPF1Q92900 1129 aaKnown RBP eCLIP21.2■□□□□ 0.983e-7■□□□□ 8.7
CDC42SE1-203ENST00000470278 MARF1Q9Y4F3 1742 aaKnown RBP21.19■□□□□ 0.98
CDC42SE1-203ENST00000470278 CENPJQ9HC77 1338 aaPredicted RBP21.19■□□□□ 0.98
CDC42SE1-203ENST00000470278 SBNO2Q9Y2G9 1366 aa21.18■□□□□ 0.98
CDC42SE1-203ENST00000470278 ORAI2Q96SN7 254 aa21.17■□□□□ 0.98
CDC42SE1-203ENST00000470278 SOS2Q07890 1332 aaPredicted RBP21.17■□□□□ 0.98
CDC42SE1-203ENST00000470278 EP400Q96L91 3159 aa21.16■□□□□ 0.98
CDC42SE1-203ENST00000470278 PXDNQ92626 1479 aa21.16■□□□□ 0.98
CDC42SE1-203ENST00000470278 USP47Q96K76 1375 aa21.15■□□□□ 0.98
CDC42SE1-203ENST00000470278 SAFB2Q14151 953 aaKnown RBP eCLIP21.15■□□□□ 0.98
CDC42SE1-203ENST00000470278 LRRC59Q96AG4 307 aaKnown RBP21.15■□□□□ 0.98
CDC42SE1-203ENST00000470278 TULP4Q9NRJ4 1543 aa21.14■□□□□ 0.97
CDC42SE1-203ENST00000470278 ANKARQ7Z5J8 1434 aa21.12■□□□□ 0.97
CDC42SE1-203ENST00000470278 USP32Q8NFA0 1604 aa21.12■□□□□ 0.97
CDC42SE1-203ENST00000470278 MINK1Q8N4C8 1332 aaPredicted RBP21.12■□□□□ 0.97
CDC42SE1-203ENST00000470278 RXRBP28702 533 aa21.12■□□□□ 0.97
CDC42SE1-203ENST00000470278 RGPD8O14715 1765 aaPredicted RBP21.11■□□□□ 0.97
CDC42SE1-203ENST00000470278 ITSN1Q15811 1721 aa21.09■□□□□ 0.97
CDC42SE1-203ENST00000470278 C8orf37Q96NL8 207 aa21.09■□□□□ 0.97
CDC42SE1-203ENST00000470278 KIF1AQ12756 1690 aa21.09■□□□□ 0.97
CDC42SE1-203ENST00000470278 TOPAZ1Q8N9V7 1692 aa21.09■□□□□ 0.97
CDC42SE1-203ENST00000470278 ATP7BP35670 1465 aa21.08■□□□□ 0.97
CDC42SE1-203ENST00000470278 WASLO00401 505 aaPredicted RBP21.08■□□□□ 0.97
CDC42SE1-203ENST00000470278 SRCAPQ6ZRS2 3230 aa21.08■□□□□ 0.97
CDC42SE1-203ENST00000470278 HIRIP3Q9BW71 556 aaPredicted RBP21.08■□□□□ 0.97
CDC42SE1-203ENST00000470278 ATRNO75882 1429 aa21.05■□□□□ 0.96
CDC42SE1-203ENST00000470278 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.05■□□□□ 0.96
CDC42SE1-203ENST00000470278 ST20-MTHFSA0A0A6YYL1 179 aa21.05■□□□□ 0.96
CDC42SE1-203ENST00000470278 SLC24A1O60721 1099 aa21.05■□□□□ 0.96
CDC42SE1-203ENST00000470278 ABCA3Q99758 1704 aa21.04■□□□□ 0.96
CDC42SE1-203ENST00000470278 ADAMTS2O95450 1211 aa21.04■□□□□ 0.96
CDC42SE1-203ENST00000470278 TESK2Q96S53 571 aa21.04■□□□□ 0.96
CDC42SE1-203ENST00000470278 QTRT2Q9H974 415 aaKnown RBP21.04■□□□□ 0.96
CDC42SE1-203ENST00000470278 EVC2Q86UK5 1308 aa21.04■□□□□ 0.96
CDC42SE1-203ENST00000470278 BCL9LQ86UU0 1499 aa21.03■□□□□ 0.96
CDC42SE1-203ENST00000470278 RBM6P78332 1123 aaKnown RBP21.03■□□□□ 0.96
CDC42SE1-203ENST00000470278 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
CDC42SE1-203ENST00000470278 EIF4G2P78344 907 aaKnown RBP eCLIP21.02■□□□□ 0.96
CDC42SE1-203ENST00000470278 CDK19Q9BWU1 502 aa21.02■□□□□ 0.96
CDC42SE1-203ENST00000470278 PRR36Q9H6K5 1346 aa21.01■□□□□ 0.95
CDC42SE1-203ENST00000470278 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
CDC42SE1-203ENST00000470278 GLI3P10071 1580 aa20.98■□□□□ 0.95
CDC42SE1-203ENST00000470278 XPCQ01831 940 aaPredicted RBP20.98■□□□□ 0.95
CDC42SE1-203ENST00000470278 NGLY1Q96IV0 654 aa20.98■□□□□ 0.95
CDC42SE1-203ENST00000470278 ATAD2Q6PL18 1390 aa20.97■□□□□ 0.95
CDC42SE1-203ENST00000470278 BRWD3Q6RI45 1802 aa20.97■□□□□ 0.95
CDC42SE1-203ENST00000470278 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
CDC42SE1-203ENST00000470278 SRPK2P78362 688 aaKnown RBP20.97■□□□□ 0.95
CDC42SE1-203ENST00000470278 ESCO1Q5FWF5 840 aa20.97■□□□□ 0.95
CDC42SE1-203ENST00000470278 NUDT16Q96DE0 195 aaKnown RBP20.97■□□□□ 0.95
CDC42SE1-203ENST00000470278 PUS7Q96PZ0 661 aaKnown RBP20.97■□□□□ 0.95
CDC42SE1-203ENST00000470278 NPHP3Q7Z494 1330 aa20.97■□□□□ 0.95
CDC42SE1-203ENST00000470278 FOXO3O43524 673 aa20.95■□□□□ 0.94
CDC42SE1-203ENST00000470278 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms