RNA–Protein interactions for RNA: ENST00000468397.1

CDK11A-212, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-212ENST00000468397 ARHGEF28Q8N1W1 1705 aaKnown RBP23.7■■□□□ 1.38
CDK11A-212ENST00000468397 CDC42BPGQ6DT37 1551 aa23.69■■□□□ 1.38
CDK11A-212ENST00000468397 PRAM1Q96QH2 718 aa23.69■■□□□ 1.38
CDK11A-212ENST00000468397 POGKQ9P215 609 aa23.69■■□□□ 1.38
CDK11A-212ENST00000468397 ROBO1Q9Y6N7 1651 aa23.68■■□□□ 1.38
CDK11A-212ENST00000468397 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
CDK11A-212ENST00000468397 ROCK2O75116 1388 aaKnown RBP23.66■■□□□ 1.38
CDK11A-212ENST00000468397 TIMELESSQ9UNS1 1208 aa23.66■■□□□ 1.38
CDK11A-212ENST00000468397 MST1RQ04912 1400 aa23.66■■□□□ 1.38
CDK11A-212ENST00000468397 NBPF8Q3BBV2 869 aa23.64■■□□□ 1.37
CDK11A-212ENST00000468397 SAFB2Q14151 953 aaKnown RBP eCLIP23.63■■□□□ 1.37
CDK11A-212ENST00000468397 RALGAPBQ86X10 1494 aa23.62■■□□□ 1.37
CDK11A-212ENST00000468397 ADGRB2O60241 1585 aa23.61■■□□□ 1.37
CDK11A-212ENST00000468397 FMN2Q9NZ56 1722 aa23.6■■□□□ 1.37
CDK11A-212ENST00000468397 GPRASP1Q5JY77 1395 aa23.6■■□□□ 1.37
CDK11A-212ENST00000468397 HSPA1LP34931 641 aa23.59■■□□□ 1.37
CDK11A-212ENST00000468397 C1orf167Q5SNV9 1468 aa23.59■■□□□ 1.37
CDK11A-212ENST00000468397 EIF3AQ14152 1382 aaKnown RBP23.56■■□□□ 1.36
CDK11A-212ENST00000468397 MINK1Q8N4C8 1332 aaPredicted RBP23.56■■□□□ 1.36
CDK11A-212ENST00000468397 BRINP3Q76B58 766 aa23.55■■□□□ 1.36
CDK11A-212ENST00000468397 CENPJQ9HC77 1338 aaPredicted RBP23.55■■□□□ 1.36
CDK11A-212ENST00000468397 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
CDK11A-212ENST00000468397 PHLPP1O60346 1717 aa23.54■■□□□ 1.36
CDK11A-212ENST00000468397 CARD11Q9BXL7 1154 aa23.54■■□□□ 1.36
CDK11A-212ENST00000468397 AHDC1Q5TGY3 1603 aaPredicted RBP23.54■■□□□ 1.36
CDK11A-212ENST00000468397 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
CDK11A-212ENST00000468397 NHSL1Q5SYE7 1610 aa23.51■■□□□ 1.35
CDK11A-212ENST00000468397 NUTM2FA1L443 756 aa23.5■■□□□ 1.35
CDK11A-212ENST00000468397 ANKARQ7Z5J8 1434 aa23.5■■□□□ 1.35
CDK11A-212ENST00000468397 WASLO00401 505 aaPredicted RBP23.49■■□□□ 1.35
CDK11A-212ENST00000468397 TULP4Q9NRJ4 1543 aa23.49■■□□□ 1.35
CDK11A-212ENST00000468397 KIF1AQ12756 1690 aa23.48■■□□□ 1.35
CDK11A-212ENST00000468397 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
CDK11A-212ENST00000468397 ORAI2Q96SN7 254 aa23.48■■□□□ 1.35
CDK11A-212ENST00000468397 COL16A1Q07092 1604 aaPredicted RBP23.48■■□□□ 1.35
CDK11A-212ENST00000468397 RGPD8O14715 1765 aaPredicted RBP23.47■■□□□ 1.35
CDK11A-212ENST00000468397 USP32Q8NFA0 1604 aa23.45■■□□□ 1.34
CDK11A-212ENST00000468397 ITSN1Q15811 1721 aa23.44■■□□□ 1.34
CDK11A-212ENST00000468397 NPHP3Q7Z494 1330 aa23.42■■□□□ 1.34
CDK11A-212ENST00000468397 CDK19Q9BWU1 502 aa23.42■■□□□ 1.34
CDK11A-212ENST00000468397 PHF8Q9UPP1 1060 aa23.4■■□□□ 1.34
CDK11A-212ENST00000468397 ATP7BP35670 1465 aa23.4■■□□□ 1.34
CDK11A-212ENST00000468397 SBNO2Q9Y2G9 1366 aa23.4■■□□□ 1.34
CDK11A-212ENST00000468397 JCADQ9P266 1359 aa23.39■■□□□ 1.33
CDK11A-212ENST00000468397 EVC2Q86UK5 1308 aa23.38■■□□□ 1.33
CDK11A-212ENST00000468397 PRR36Q9H6K5 1346 aa23.38■■□□□ 1.33
CDK11A-212ENST00000468397 SRPK2P78362 688 aaKnown RBP23.38■■□□□ 1.33
CDK11A-212ENST00000468397 DDX17Q92841 729 aaKnown RBP23.38■■□□□ 1.33
CDK11A-212ENST00000468397 FOXO3O43524 673 aa23.37■■□□□ 1.33
CDK11A-212ENST00000468397 NUDT16Q96DE0 195 aaKnown RBP23.37■■□□□ 1.33
CDK11A-212ENST00000468397 USP47Q96K76 1375 aa23.37■■□□□ 1.33
CDK11A-212ENST00000468397 SOS2Q07890 1332 aaPredicted RBP23.36■■□□□ 1.33
CDK11A-212ENST00000468397 SHPRHQ149N8 1683 aa23.36■■□□□ 1.33
CDK11A-212ENST00000468397 TOPAZ1Q8N9V7 1692 aa23.36■■□□□ 1.33
CDK11A-212ENST00000468397 LRRC59Q96AG4 307 aaKnown RBP23.36■■□□□ 1.33
CDK11A-212ENST00000468397 PXDNQ92626 1479 aa23.35■■□□□ 1.33
CDK11A-212ENST00000468397 PMFBP1Q8TBY8 1022 aa23.33■■□□□ 1.33
CDK11A-212ENST00000468397 CABP2Q9NPB3 220 aa23.33■■□□□ 1.33
CDK11A-212ENST00000468397 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
CDK11A-212ENST00000468397 ST20-MTHFSA0A0A6YYL1 179 aa23.31■■□□□ 1.32
CDK11A-212ENST00000468397 SLC24A1O60721 1099 aa23.31■■□□□ 1.32
CDK11A-212ENST00000468397 XPCQ01831 940 aaPredicted RBP23.3■■□□□ 1.32
CDK11A-212ENST00000468397 NGDNQ8NEJ9 315 aaKnown RBP23.3■■□□□ 1.32
CDK11A-212ENST00000468397 PSME1Q06323 249 aa23.29■■□□□ 1.32
CDK11A-212ENST00000468397 MED1Q15648 1581 aaPredicted RBP23.29■■□□□ 1.32
CDK11A-212ENST00000468397 PPIP5K1Q6PFW1 1433 aa23.29■■□□□ 1.32
CDK11A-212ENST00000468397 KRT28Q7Z3Y7 464 aa23.29■■□□□ 1.32
CDK11A-212ENST00000468397 SPATA31A6Q5VVP1 1343 aa23.28■■□□□ 1.32
CDK11A-212ENST00000468397 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.32
CDK11A-212ENST00000468397 PNPLA6Q8IY17 1366 aa23.27■■□□□ 1.32
CDK11A-212ENST00000468397 PLEKHG3A1L390 1219 aa23.26■■□□□ 1.31
CDK11A-212ENST00000468397 TESK2Q96S53 571 aa23.26■■□□□ 1.31
CDK11A-212ENST00000468397 SBNO1A3KN83 1393 aa23.25■■□□□ 1.31
CDK11A-212ENST00000468397 POLR3AO14802 1390 aaPredicted RBP23.25■■□□□ 1.31
CDK11A-212ENST00000468397 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
CDK11A-212ENST00000468397 COL22A1Q8NFW1 1626 aaPredicted RBP23.24■■□□□ 1.31
CDK11A-212ENST00000468397 TRPM3Q9HCF6 1732 aaPredicted RBP23.23■■□□□ 1.31
CDK11A-212ENST00000468397 ACEP12821 1306 aa23.23■■□□□ 1.31
CDK11A-212ENST00000468397 SPATA31A3Q5VYP0 1347 aa23.23■■□□□ 1.31
CDK11A-212ENST00000468397 EIF4G2P78344 907 aaKnown RBP eCLIP23.22■■□□□ 1.31
CDK11A-212ENST00000468397 DISP3Q9P2K9 1392 aa23.22■■□□□ 1.31
CDK11A-212ENST00000468397 TMF1P82094 1093 aa23.21■■□□□ 1.31
CDK11A-212ENST00000468397 PUS7Q96PZ0 661 aaKnown RBP23.21■■□□□ 1.31
CDK11A-212ENST00000468397 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
CDK11A-212ENST00000468397 ARHGEF10O15013 1369 aa23.2■■□□□ 1.3
CDK11A-212ENST00000468397 LRP6O75581 1613 aa23.19■■□□□ 1.3
CDK11A-212ENST00000468397 NUTM2BA6NNL0 878 aaPredicted RBP23.18■■□□□ 1.3
CDK11A-212ENST00000468397 NUTM2EB1AL46 878 aaPredicted RBP23.18■■□□□ 1.3
CDK11A-212ENST00000468397 NUTM2AQ8IVF1 878 aaPredicted RBP23.18■■□□□ 1.3
CDK11A-212ENST00000468397 ALS2Q96Q42 1657 aa23.18■■□□□ 1.3
CDK11A-212ENST00000468397 CDCA8Q53HL2 280 aa23.17■■□□□ 1.3
CDK11A-212ENST00000468397 LMOD2Q6P5Q4 547 aa23.17■■□□□ 1.3
CDK11A-212ENST00000468397 PAK3O75914 559 aaPredicted RBP23.16■■□□□ 1.3
CDK11A-212ENST00000468397 MEX3CQ5U5Q3 659 aaKnown RBP23.16■■□□□ 1.3
CDK11A-212ENST00000468397 AKAP12Q02952 1782 aa23.16■■□□□ 1.3
CDK11A-212ENST00000468397 BRD4O60885 1362 aaPredicted RBP23.15■■□□□ 1.3
CDK11A-212ENST00000468397 HSPA5P11021 654 aaKnown RBP23.15■■□□□ 1.3
CDK11A-212ENST00000468397 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
CDK11A-212ENST00000468397 NINLQ9Y2I6 1382 aa23.14■■□□□ 1.3
CDK11A-212ENST00000468397 ILDR2Q71H61 639 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 646.6 ms