RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579	STK26	Q9P289	416 aa		13.69	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	PLEKHH1	Q9ULM0	1364 aa		13.69	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	HSPA1L	P34931	641 aa		13.68	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	WAPL	Q7Z5K2	1190 aa		13.68	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	TRPM1	Q7Z4N2	1603 aa		13.68	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.67	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	ADGRB2	O60241	1585 aa		13.66	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	SCAF1	Q9H7N4	1312 aa	Known RBP	13.66	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.66	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	C1orf167	Q5SNV9	1468 aa		13.66	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	FMN2	Q9NZ56	1722 aa		13.65	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	NBPF1	Q3BBV0	1214 aa		13.64	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	BRINP3	Q76B58	766 aa		13.64	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	PRAM1	Q96QH2	718 aa		13.64	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	NHSL1	Q5SYE7	1610 aa		13.64	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	GPRASP1	Q5JY77	1395 aa		13.63	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	TONSL	Q96HA7	1378 aa		13.63	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	TRAK1	Q9UPV9	953 aa		13.63	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	COL16A1	Q07092	1604 aa	Predicted RBP	13.63	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	PHLPP1	O60346	1717 aa		13.62	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	NBPF8	Q3BBV2	869 aa		13.62	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	TIMELESS	Q9UNS1	1208 aa		13.61	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	RALGAPB	Q86X10	1494 aa		13.61	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	POGK	Q9P215	609 aa		13.6	□□□□□ -0.23
SDCCAG3-208	ENST00000466579	ANKAR	Q7Z5J8	1434 aa		13.58	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	USP32	Q8NFA0	1604 aa		13.58	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	RGPD8	O14715	1765 aa	Predicted RBP	13.57	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	ROCK2	O75116	1388 aa	Known RBP	13.57	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	KIF1A	Q12756	1690 aa		13.56	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	TULP4	Q9NRJ4	1543 aa		13.56	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	ORAI2	Q96SN7	254 aa		13.56	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	SHPRH	Q149N8	1683 aa		13.56	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	EIF3A	Q14152	1382 aa	Known RBP	13.56	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	WASL	O00401	505 aa	Predicted RBP	13.55	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	QRICH2	Q9H0J4	1663 aa		13.55	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	SOS2	Q07890	1332 aa	Predicted RBP	13.55	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	JCAD	Q9P266	1359 aa		13.55	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.54	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.54	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	PXDN	Q92626	1479 aa		13.54	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	MED1	Q15648	1581 aa	Predicted RBP	13.54	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	ESCO1	Q5FWF5	840 aa		13.53	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.53	□□□□□ -0.24
SDCCAG3-208	ENST00000466579	CCER1	Q8TC90	406 aa	Predicted RBP	13.52	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	NPHP3	Q7Z494	1330 aa		13.52	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	PRR36	Q9H6K5	1346 aa		13.52	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	SBNO2	Q9Y2G9	1366 aa		13.52	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	ATP7B	P35670	1465 aa		13.52	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	ITSN1	Q15811	1721 aa		13.51	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	TOPAZ1	Q8N9V7	1692 aa		13.51	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	NUTM2F	A1L443	756 aa		13.5	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	DDX17	Q92841	729 aa	Known RBP	13.5	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	LRRC59	Q96AG4	307 aa	Known RBP	13.5	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	CARD11	Q9BXL7	1154 aa		13.5	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	PHF8	Q9UPP1	1060 aa		13.5	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	SPATA31A6	Q5VVP1	1343 aa		13.49	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	CDK19	Q9BWU1	502 aa		13.49	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.49	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	PNPLA6	Q8IY17	1366 aa		13.48	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	FOXO3	O43524	673 aa		13.48	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	NUDT16	Q96DE0	195 aa	Known RBP	13.47	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.47	□□□□□ -0.25
SDCCAG3-208	ENST00000466579	LRP6	O75581	1613 aa		13.46	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	SBNO1	A3KN83	1393 aa		13.45	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	POLR3A	O14802	1390 aa	Predicted RBP	13.45	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	PLEKHG3	A1L390	1219 aa		13.45	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	CCDC61	Q9Y6R9	512 aa		13.45	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	SPATA31A3	Q5VYP0	1347 aa		13.44	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	EVC2	Q86UK5	1308 aa		13.44	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	KRT28	Q7Z3Y7	464 aa		13.44	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	TNS3	Q68CZ2	1445 aa		13.43	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	PMFBP1	Q8TBY8	1022 aa		13.43	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	TESK2	Q96S53	571 aa		13.43	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	ALS2	Q96Q42	1657 aa		13.43	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	DISP3	Q9P2K9	1392 aa		13.43	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	PSME1	Q06323	249 aa		13.42	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	PUS7	Q96PZ0	661 aa	Known RBP	13.42	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	SLC24A1	O60721	1099 aa		13.41	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	SRPK2	P78362	688 aa	Known RBP	13.41	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	XPC	Q01831	940 aa	Predicted RBP	13.41	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	CABP2	Q9NPB3	220 aa		13.41	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	USP47	Q96K76	1375 aa		13.41	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	PPIP5K1	Q6PFW1	1433 aa		13.4	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	ST20-MTHFS	A0A0A6YYL1	179 aa		13.4	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	ATAD2	Q6PL18	1390 aa		13.4	□□□□□ -0.26
SDCCAG3-208	ENST00000466579	ACE	P12821	1306 aa		13.39	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	NGDN	Q8NEJ9	315 aa	Known RBP	13.39	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	RGS17	Q9UGC6	210 aa	Predicted RBP	13.39	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	ARHGEF10	O15013	1369 aa		13.39	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	BRD4	O60885	1362 aa	Predicted RBP	13.39	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	MARF1	Q9Y4F3	1742 aa	Known RBP	13.39	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	AKAP12	Q02952	1782 aa		13.38	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	ABCA3	Q99758	1704 aa		13.38	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	CRYBG1	Q9Y4K1	1723 aa		13.38	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	CABP1	Q9NZU7	370 aa		13.37	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	CPSF1	Q10570	1443 aa	Known RBP	13.37	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	SSH2	Q76I76	1423 aa		13.37	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.35	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	NUTM2E	B1AL46	878 aa	Predicted RBP	13.35	□□□□□ -0.27

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