RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 TUSC1Q2TAM9 212 aa11.66□□□□□ -0.54
SPTA1-203ENST00000465741 PROCA1Q8NCQ7 364 aaPredicted RBP11.66□□□□□ -0.54
SPTA1-203ENST00000465741 SPTLC1O15269 473 aa11.65□□□□□ -0.54
SPTA1-203ENST00000465741 APLP1P51693 650 aa11.65□□□□□ -0.54
SPTA1-203ENST00000465741 NRG2O14511 850 aaPredicted RBP11.64□□□□□ -0.55
SPTA1-203ENST00000465741 RSBN1LQ6PCB5 846 aaPredicted RBP11.64□□□□□ -0.55
SPTA1-203ENST00000465741 RNF40O75150 1001 aa11.63□□□□□ -0.55
SPTA1-203ENST00000465741 SLC10A3P09131 477 aa11.63□□□□□ -0.55
SPTA1-203ENST00000465741 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
SPTA1-203ENST00000465741 RSF1Q96T23 1441 aaPredicted RBP11.62□□□□□ -0.55
SPTA1-203ENST00000465741 GRIPAP1Q4V328 841 aa11.62□□□□□ -0.55
SPTA1-203ENST00000465741 LIMD1Q9UGP4 676 aa11.62□□□□□ -0.55
SPTA1-203ENST00000465741 V9GY48 417 aaPredicted RBP11.62□□□□□ -0.55
SPTA1-203ENST00000465741 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
SPTA1-203ENST00000465741 HOXA2O43364 376 aa11.6□□□□□ -0.55
SPTA1-203ENST00000465741 KMT5BQ4FZB7 885 aa11.6□□□□□ -0.55
SPTA1-203ENST00000465741 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.6□□□□□ -0.55
SPTA1-203ENST00000465741 CFHP08603 1231 aa11.59□□□□□ -0.55
SPTA1-203ENST00000465741 PPP2R2DQ66LE6 453 aa11.59□□□□□ -0.55
SPTA1-203ENST00000465741 NDUFV2P19404 249 aa11.58□□□□□ -0.56
SPTA1-203ENST00000465741 ZMYND15Q9H091 742 aa11.58□□□□□ -0.56
SPTA1-203ENST00000465741 RFC5P40937 340 aa11.57□□□□□ -0.56
SPTA1-203ENST00000465741 CSPP1Q1MSJ5 1256 aa11.57□□□□□ -0.56
SPTA1-203ENST00000465741 TMEM259Q4ZIN3 620 aa11.57□□□□□ -0.56
SPTA1-203ENST00000465741 PRPF38BQ5VTL8 546 aaKnown RBP11.57□□□□□ -0.56
SPTA1-203ENST00000465741 PRR14Q9BWN1 585 aa11.57□□□□□ -0.56
SPTA1-203ENST00000465741 MROH2BQ7Z745 1585 aa11.57□□□□□ -0.56
SPTA1-203ENST00000465741 FDX1P10109 184 aa11.56□□□□□ -0.56
SPTA1-203ENST00000465741 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
SPTA1-203ENST00000465741 ZBTB3Q9H5J0 574 aa11.55□□□□□ -0.56
SPTA1-203ENST00000465741 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
SPTA1-203ENST00000465741 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
SPTA1-203ENST00000465741 LILRB3O75022 631 aa11.54□□□□□ -0.56
SPTA1-203ENST00000465741 MCM6Q14566 821 aa11.54□□□□□ -0.56
SPTA1-203ENST00000465741 NUTM2DQ5VT03 806 aaPredicted RBP11.54□□□□□ -0.56
SPTA1-203ENST00000465741 NUTM2AQ8IVF1 878 aaPredicted RBP11.54□□□□□ -0.56
SPTA1-203ENST00000465741 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
SPTA1-203ENST00000465741 FUT2Q10981 343 aa11.53□□□□□ -0.56
SPTA1-203ENST00000465741 BAZ1AQ9NRL2 1556 aaPredicted RBP11.53□□□□□ -0.56
SPTA1-203ENST00000465741 SPDYE5A6NIY4 337 aa11.52□□□□□ -0.57
SPTA1-203ENST00000465741 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
SPTA1-203ENST00000465741 COPS2P61201 443 aa11.52□□□□□ -0.57
SPTA1-203ENST00000465741 PDZRN3Q9UPQ7 1066 aa11.52□□□□□ -0.57
SPTA1-203ENST00000465741 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
SPTA1-203ENST00000465741 QPCTQ16769 361 aa11.51□□□□□ -0.57
SPTA1-203ENST00000465741 CC2D2AQ9P2K1 1620 aa11.5□□□□□ -0.57
SPTA1-203ENST00000465741 ACTN4O43707 911 aaKnown RBP11.5□□□□□ -0.57
SPTA1-203ENST00000465741 EMID1Q96A84 441 aaPredicted RBP11.5□□□□□ -0.57
SPTA1-203ENST00000465741 MTMR2Q13614 643 aa11.49□□□□□ -0.57
SPTA1-203ENST00000465741 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
SPTA1-203ENST00000465741 APBB1O00213 710 aa11.48□□□□□ -0.57
SPTA1-203ENST00000465741 HRCP23327 699 aa11.48□□□□□ -0.57
SPTA1-203ENST00000465741 GUCA2AQ02747 115 aa11.48□□□□□ -0.57
SPTA1-203ENST00000465741 EIF4G1Q04637 1599 aaKnown RBP11.47□□□□□ -0.57
SPTA1-203ENST00000465741 CABLES1Q8TDN4 633 aa11.47□□□□□ -0.57
SPTA1-203ENST00000465741 PCDHGC3Q9UN70 934 aa11.47□□□□□ -0.57
SPTA1-203ENST00000465741 RAD21O60216 631 aa11.46□□□□□ -0.57
SPTA1-203ENST00000465741 RTL5Q5HYW3 569 aaPredicted RBP11.46□□□□□ -0.57
SPTA1-203ENST00000465741 FBXO31Q5XUX0 539 aaPredicted RBP11.46□□□□□ -0.57
SPTA1-203ENST00000465741 ZNF787Q6DD87 383 aa11.46□□□□□ -0.57
SPTA1-203ENST00000465741 HLA-CQ95604 372 aa11.46□□□□□ -0.57
SPTA1-203ENST00000465741 SMARCA4P51532 1647 aa11.46□□□□□ -0.58
SPTA1-203ENST00000465741 A6NJR5 290 aa11.45□□□□□ -0.58
SPTA1-203ENST00000465741 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
SPTA1-203ENST00000465741 SOCS7O14512 581 aa11.45□□□□□ -0.58
SPTA1-203ENST00000465741 ZPR1O75312 459 aa11.45□□□□□ -0.58
SPTA1-203ENST00000465741 AP1G2O75843 785 aa11.45□□□□□ -0.58
SPTA1-203ENST00000465741 Q3C1V9 767 aa11.45□□□□□ -0.58
SPTA1-203ENST00000465741 MORN1Q5T089 497 aa11.44□□□□□ -0.58
SPTA1-203ENST00000465741 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
SPTA1-203ENST00000465741 PRM3Q9NNZ6 103 aa11.43□□□□□ -0.58
SPTA1-203ENST00000465741 ATAD2BQ9ULI0 1458 aa11.43□□□□□ -0.58
SPTA1-203ENST00000465741 ZNF775Q96BV0 537 aaPredicted RBP11.42□□□□□ -0.58
SPTA1-203ENST00000465741 SNRKQ9NRH2 765 aa11.42□□□□□ -0.58
SPTA1-203ENST00000465741 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
SPTA1-203ENST00000465741 USP17L8P0C7I0 530 aa11.41□□□□□ -0.58
SPTA1-203ENST00000465741 GGCXP38435 758 aa11.41□□□□□ -0.58
SPTA1-203ENST00000465741 PUS10Q3MIT2 529 aaKnown RBP11.41□□□□□ -0.58
SPTA1-203ENST00000465741 BLOC1S3Q6QNY0 202 aa11.4□□□□□ -0.58
SPTA1-203ENST00000465741 CLUAP1Q96AJ1 413 aa11.4□□□□□ -0.58
SPTA1-203ENST00000465741 PCDHB3Q9Y5E6 796 aa11.4□□□□□ -0.58
SPTA1-203ENST00000465741 TLL1O43897 1013 aa11.39□□□□□ -0.59
SPTA1-203ENST00000465741 RETREG3Q86VR2 466 aa11.39□□□□□ -0.59
SPTA1-203ENST00000465741 TSC1Q92574 1164 aa11.39□□□□□ -0.59
SPTA1-203ENST00000465741 SLC27A5Q9Y2P5 690 aa11.39□□□□□ -0.59
SPTA1-203ENST00000465741 NR1I2O75469 434 aa11.38□□□□□ -0.59
SPTA1-203ENST00000465741 MTMR14Q8NCE2 650 aa11.38□□□□□ -0.59
SPTA1-203ENST00000465741 WIZO95785 1651 aa11.38□□□□□ -0.59
SPTA1-203ENST00000465741 PROSER2Q86WR7 435 aaPredicted RBP11.37□□□□□ -0.59
SPTA1-203ENST00000465741 SALL2Q9Y467 1007 aaPredicted RBP11.37□□□□□ -0.59
SPTA1-203ENST00000465741 NCAPD3P42695 1498 aa11.37□□□□□ -0.59
SPTA1-203ENST00000465741 CFAP99D6REC4 459 aa11.36□□□□□ -0.59
SPTA1-203ENST00000465741 SLC19A1P41440 591 aa11.36□□□□□ -0.59
SPTA1-203ENST00000465741 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
SPTA1-203ENST00000465741 PRR7Q8TB68 274 aa11.36□□□□□ -0.59
SPTA1-203ENST00000465741 COG6Q9Y2V7 657 aa11.36□□□□□ -0.59
SPTA1-203ENST00000465741 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
SPTA1-203ENST00000465741 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
SPTA1-203ENST00000465741 POTECB2RU33 542 aa11.34□□□□□ -0.59
SPTA1-203ENST00000465741 TRAK2O60296 914 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms