RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 SLAIN2Q9P270 581 aa11.69□□□□□ -0.54
SSR1-203ENST00000462112 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
SSR1-203ENST00000462112 DCCP43146 1447 aa11.69□□□□□ -0.54
SSR1-203ENST00000462112 YTHDC2Q9H6S0 1430 aaKnown RBP11.69□□□□□ -0.54
SSR1-203ENST00000462112 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
SSR1-203ENST00000462112 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
SSR1-203ENST00000462112 XRN1Q8IZH2 1706 aaKnown RBP11.68□□□□□ -0.54
SSR1-203ENST00000462112 PTPRUQ92729 1446 aa11.68□□□□□ -0.54
SSR1-203ENST00000462112 RBM33Q96EV2 1170 aaKnown RBP11.67□□□□□ -0.54
SSR1-203ENST00000462112 PRAG1Q86YV5 1406 aa11.67□□□□□ -0.54
SSR1-203ENST00000462112 FAM135BQ49AJ0 1406 aa11.66□□□□□ -0.54
SSR1-203ENST00000462112 ADGRL3Q9HAR2 1447 aa11.66□□□□□ -0.54
SSR1-203ENST00000462112 TECPR2O15040 1411 aa11.65□□□□□ -0.54
SSR1-203ENST00000462112 SETD1AO15047 1707 aaKnown RBP11.65□□□□□ -0.54
SSR1-203ENST00000462112 ROBO2Q9HCK4 1378 aa11.65□□□□□ -0.55
SSR1-203ENST00000462112 KIAA1210Q9ULL0 1709 aa11.64□□□□□ -0.55
SSR1-203ENST00000462112 TRAK1Q9UPV9 953 aa11.64□□□□□ -0.55
SSR1-203ENST00000462112 EIF3AQ14152 1382 aaKnown RBP11.64□□□□□ -0.55
SSR1-203ENST00000462112 KNDC1Q76NI1 1749 aa11.63□□□□□ -0.55
SSR1-203ENST00000462112 XIRP1Q702N8 1843 aaKnown RBP11.63□□□□□ -0.55
SSR1-203ENST00000462112 PRAM1Q96QH2 718 aa11.63□□□□□ -0.55
SSR1-203ENST00000462112 DLC1Q96QB1 1528 aa11.62□□□□□ -0.55
SSR1-203ENST00000462112 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
SSR1-203ENST00000462112 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.62□□□□□ -0.55
SSR1-203ENST00000462112 ROCK2O75116 1388 aaKnown RBP11.62□□□□□ -0.55
SSR1-203ENST00000462112 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
SSR1-203ENST00000462112 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
SSR1-203ENST00000462112 SAFB2Q14151 953 aaKnown RBP eCLIP11.6□□□□□ -0.55
SSR1-203ENST00000462112 HSPA1LP34931 641 aa11.59□□□□□ -0.55
SSR1-203ENST00000462112 ADGRB1O14514 1584 aa11.58□□□□□ -0.55
SSR1-203ENST00000462112 CARD11Q9BXL7 1154 aa11.58□□□□□ -0.56
SSR1-203ENST00000462112 ASXL1Q8IXJ9 1541 aa11.58□□□□□ -0.56
SSR1-203ENST00000462112 CDC42BPGQ6DT37 1551 aa11.58□□□□□ -0.56
SSR1-203ENST00000462112 CENPJQ9HC77 1338 aaPredicted RBP11.58□□□□□ -0.56
SSR1-203ENST00000462112 ROBO1Q9Y6N7 1651 aa11.57□□□□□ -0.56
SSR1-203ENST00000462112 NBPF1Q3BBV0 1214 aa11.57□□□□□ -0.56
SSR1-203ENST00000462112 ESCO1Q5FWF5 840 aa11.57□□□□□ -0.56
SSR1-203ENST00000462112 NALCNQ8IZF0 1738 aa11.57□□□□□ -0.56
SSR1-203ENST00000462112 MINK1Q8N4C8 1332 aaPredicted RBP11.57□□□□□ -0.56
SSR1-203ENST00000462112 MST1RQ04912 1400 aa11.56□□□□□ -0.56
SSR1-203ENST00000462112 LRRC59Q96AG4 307 aaKnown RBP11.56□□□□□ -0.56
SSR1-203ENST00000462112 NPHP3Q7Z494 1330 aa11.56□□□□□ -0.56
SSR1-203ENST00000462112 PSME1Q06323 249 aa11.55□□□□□ -0.56
SSR1-203ENST00000462112 BRINP3Q76B58 766 aa11.55□□□□□ -0.56
SSR1-203ENST00000462112 C1orf167Q5SNV9 1468 aa11.55□□□□□ -0.56
SSR1-203ENST00000462112 PLEKHH1Q9ULM0 1364 aa11.54□□□□□ -0.56
SSR1-203ENST00000462112 TRPM1Q7Z4N2 1603 aa11.54□□□□□ -0.56
SSR1-203ENST00000462112 WASLO00401 505 aaPredicted RBP11.54□□□□□ -0.56
SSR1-203ENST00000462112 EVC2Q86UK5 1308 aa11.54□□□□□ -0.56
SSR1-203ENST00000462112 ANKARQ7Z5J8 1434 aa11.53□□□□□ -0.56
SSR1-203ENST00000462112 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
SSR1-203ENST00000462112 SRPK2P78362 688 aaKnown RBP11.53□□□□□ -0.56
SSR1-203ENST00000462112 HIRIP3Q9BW71 556 aaPredicted RBP11.53□□□□□ -0.56
SSR1-203ENST00000462112 JCADQ9P266 1359 aa11.53□□□□□ -0.56
SSR1-203ENST00000462112 PHLPP1O60346 1717 aa11.52□□□□□ -0.56
SSR1-203ENST00000462112 RALGAPBQ86X10 1494 aa11.52□□□□□ -0.56
SSR1-203ENST00000462112 FKBP8Q14318 412 aa11.52□□□□□ -0.57
SSR1-203ENST00000462112 NBPF8Q3BBV2 869 aa11.52□□□□□ -0.57
SSR1-203ENST00000462112 PHF8Q9UPP1 1060 aa11.52□□□□□ -0.57
SSR1-203ENST00000462112 GPRASP1Q5JY77 1395 aa11.52□□□□□ -0.57
SSR1-203ENST00000462112 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
SSR1-203ENST00000462112 ADGRB2O60241 1585 aa11.51□□□□□ -0.57
SSR1-203ENST00000462112 NGDNQ8NEJ9 315 aaKnown RBP11.51□□□□□ -0.57
SSR1-203ENST00000462112 ORAI2Q96SN7 254 aa11.51□□□□□ -0.57
SSR1-203ENST00000462112 CDK19Q9BWU1 502 aa11.51□□□□□ -0.57
SSR1-203ENST00000462112 AHDC1Q5TGY3 1603 aaPredicted RBP11.5□□□□□ -0.57
SSR1-203ENST00000462112 FMN2Q9NZ56 1722 aa11.5□□□□□ -0.57
SSR1-203ENST00000462112 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
SSR1-203ENST00000462112 SPATA31A6Q5VVP1 1343 aa11.5□□□□□ -0.57
SSR1-203ENST00000462112 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
SSR1-203ENST00000462112 FOXO3O43524 673 aa11.49□□□□□ -0.57
SSR1-203ENST00000462112 CDCA8Q53HL2 280 aa11.49□□□□□ -0.57
SSR1-203ENST00000462112 NUDT16Q96DE0 195 aaKnown RBP11.49□□□□□ -0.57
SSR1-203ENST00000462112 TULP4Q9NRJ4 1543 aa11.49□□□□□ -0.57
SSR1-203ENST00000462112 MEX3CQ5U5Q3 659 aaKnown RBP11.48□□□□□ -0.57
SSR1-203ENST00000462112 HAP1P54257 671 aaPredicted RBP11.47□□□□□ -0.57
SSR1-203ENST00000462112 KRT28Q7Z3Y7 464 aa11.47□□□□□ -0.57
SSR1-203ENST00000462112 ITSN1Q15811 1721 aa11.46□□□□□ -0.57
SSR1-203ENST00000462112 QRICH2Q9H0J4 1663 aa11.46□□□□□ -0.57
SSR1-203ENST00000462112 ATAD2Q6PL18 1390 aa11.46□□□□□ -0.57
SSR1-203ENST00000462112 SBNO2Q9Y2G9 1366 aa11.46□□□□□ -0.57
SSR1-203ENST00000462112 SOS2Q07890 1332 aaPredicted RBP11.46□□□□□ -0.57
SSR1-203ENST00000462112 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.58
SSR1-203ENST00000462112 TMF1P82094 1093 aa11.45□□□□□ -0.58
SSR1-203ENST00000462112 LMOD2Q6P5Q4 547 aa11.45□□□□□ -0.58
SSR1-203ENST00000462112 PMFBP1Q8TBY8 1022 aa11.45□□□□□ -0.58
SSR1-203ENST00000462112 PUS7Q96PZ0 661 aaKnown RBP11.45□□□□□ -0.58
SSR1-203ENST00000462112 ARHGEF10O15013 1369 aa11.44□□□□□ -0.58
SSR1-203ENST00000462112 DISP3Q9P2K9 1392 aa11.44□□□□□ -0.58
SSR1-203ENST00000462112 EIF4G2P78344 907 aaKnown RBP eCLIP11.44□□□□□ -0.58
SSR1-203ENST00000462112 ZNF692Q9BU19 519 aaPredicted RBP11.44□□□□□ -0.58
SSR1-203ENST00000462112 COL16A1Q07092 1604 aaPredicted RBP11.44□□□□□ -0.58
SSR1-203ENST00000462112 BRD4O60885 1362 aaPredicted RBP11.43□□□□□ -0.58
SSR1-203ENST00000462112 USP47Q96K76 1375 aa11.43□□□□□ -0.58
SSR1-203ENST00000462112 ST20-MTHFSA0A0A6YYL1 179 aa11.43□□□□□ -0.58
SSR1-203ENST00000462112 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
SSR1-203ENST00000462112 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
SSR1-203ENST00000462112 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
SSR1-203ENST00000462112 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
SSR1-203ENST00000462112 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms