RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 KANK4Q5T7N3 995 aaPredicted RBP10.72□□□□□ -0.69
LRCH3-210ENST00000461674 NAALADL2Q58DX5 795 aa10.71□□□□□ -0.69
LRCH3-210ENST00000461674 NOVA2Q9UNW9 492 aaKnown RBP10.71□□□□□ -0.69
LRCH3-210ENST00000461674 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
LRCH3-210ENST00000461674 FXR2P51116 673 aaKnown RBP eCLIP10.7□□□□□ -0.7
LRCH3-210ENST00000461674 CWC22Q9HCG8 908 aaKnown RBP10.7□□□□□ -0.7
LRCH3-210ENST00000461674 ANKRD33BA6NCL7 494 aa10.69□□□□□ -0.7
LRCH3-210ENST00000461674 RECKO95980 971 aa10.68□□□□□ -0.7
LRCH3-210ENST00000461674 CD44P16070 742 aaKnown RBP10.67□□□□□ -0.7
LRCH3-210ENST00000461674 CTDSPL2Q05D32 466 aa10.67□□□□□ -0.7
LRCH3-210ENST00000461674 TMEM92Q6UXU6 159 aa10.67□□□□□ -0.7
LRCH3-210ENST00000461674 SERPINB4P48594 390 aa10.66□□□□□ -0.7
LRCH3-210ENST00000461674 HELBQ8NG08 1087 aaPredicted RBP10.66□□□□□ -0.7
LRCH3-210ENST00000461674 BMP2KQ9NSY1 1161 aaPredicted RBP10.66□□□□□ -0.7
LRCH3-210ENST00000461674 PPP1R1BQ9UD71 204 aaPredicted RBP10.66□□□□□ -0.7
LRCH3-210ENST00000461674 BIN2Q9UBW5 565 aaPredicted RBP10.65□□□□□ -0.7
LRCH3-210ENST00000461674 ANKRD62A6NC57 917 aa10.64□□□□□ -0.71
LRCH3-210ENST00000461674 RCCD1A6NED2 376 aa10.64□□□□□ -0.71
LRCH3-210ENST00000461674 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
LRCH3-210ENST00000461674 CLP1Q92989 425 aaKnown RBP10.64□□□□□ -0.71
LRCH3-210ENST00000461674 FAM196BA6NMK8 535 aa10.63□□□□□ -0.71
LRCH3-210ENST00000461674 DDX11L8A8MPP1 907 aa10.63□□□□□ -0.71
LRCH3-210ENST00000461674 FBXO33Q7Z6M2 555 aa10.63□□□□□ -0.71
LRCH3-210ENST00000461674 DHX37Q8IY37 1157 aaKnown RBP10.63□□□□□ -0.71
LRCH3-210ENST00000461674 NFATC2IPQ8NCF5 419 aa10.63□□□□□ -0.71
LRCH3-210ENST00000461674 PNMA1Q8ND90 353 aa10.63□□□□□ -0.71
LRCH3-210ENST00000461674 LRRN4Q8WUT4 740 aa10.63□□□□□ -0.71
LRCH3-210ENST00000461674 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
LRCH3-210ENST00000461674 SLAIN2Q9P270 581 aa10.63□□□□□ -0.71
LRCH3-210ENST00000461674 C7P10643 843 aa10.62□□□□□ -0.71
LRCH3-210ENST00000461674 HIRIP3Q9BW71 556 aaPredicted RBP10.62□□□□□ -0.71
LRCH3-210ENST00000461674 BCL11AQ9H165 835 aa10.62□□□□□ -0.71
LRCH3-210ENST00000461674 ZC3H4Q9UPT8 1303 aaKnown RBP10.61□□□□□ -0.71
LRCH3-210ENST00000461674 SLC34A2O95436 690 aa10.61□□□□□ -0.71
LRCH3-210ENST00000461674 C6orf132Q5T0Z8 1188 aa10.61□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L3A6NCW0 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L4A6NCW7 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L10C9JJH3 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L12C9JPN9 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L21D6R901 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP46P62068 366 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 IRX5P78411 483 aaPredicted RBP10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L2Q6R6M4 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 USP17L1Q7RTZ2 530 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 PLEKHM2Q8IWE5 1019 aa10.6□□□□□ -0.71
LRCH3-210ENST00000461674 KDM4AO75164 1064 aa10.59□□□□□ -0.71
LRCH3-210ENST00000461674 FDX1P10109 184 aa10.59□□□□□ -0.71
LRCH3-210ENST00000461674 PRSS12P56730 875 aa10.59□□□□□ -0.71
LRCH3-210ENST00000461674 EPS8L1Q8TE68 723 aa10.59□□□□□ -0.71
LRCH3-210ENST00000461674 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
LRCH3-210ENST00000461674 ATP2B4P23634 1241 aa10.58□□□□□ -0.72
LRCH3-210ENST00000461674 BRD2P25440 801 aaKnown RBP10.58□□□□□ -0.72
LRCH3-210ENST00000461674 FAM69CQ0P6D2 419 aa10.58□□□□□ -0.72
LRCH3-210ENST00000461674 HOXA2O43364 376 aa10.57□□□□□ -0.72
LRCH3-210ENST00000461674 ERCC5P28715 1186 aaPredicted RBP10.57□□□□□ -0.72
LRCH3-210ENST00000461674 GIMAP6Q6P9H5 292 aa10.57□□□□□ -0.72
LRCH3-210ENST00000461674 TSNAXIP1Q2TAA8 658 aa10.56□□□□□ -0.72
LRCH3-210ENST00000461674 CDCA7LQ96GN5 454 aa10.56□□□□□ -0.72
LRCH3-210ENST00000461674 EYA1Q99502 592 aa10.56□□□□□ -0.72
LRCH3-210ENST00000461674 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
LRCH3-210ENST00000461674 PIK3CDO00329 1044 aa10.55□□□□□ -0.72
LRCH3-210ENST00000461674 MTMR2Q13614 643 aa10.55□□□□□ -0.72
LRCH3-210ENST00000461674 CRTC2Q53ET0 693 aaPredicted RBP10.55□□□□□ -0.72
LRCH3-210ENST00000461674 DPH6Q7L8W6 267 aa10.55□□□□□ -0.72
LRCH3-210ENST00000461674 SLF2Q8IX21 1173 aa10.55□□□□□ -0.72
LRCH3-210ENST00000461674 C1orf216Q8TAB5 229 aa10.55□□□□□ -0.72
LRCH3-210ENST00000461674 EGFL7Q9UHF1 273 aa10.55□□□□□ -0.72
LRCH3-210ENST00000461674 DNAJB2P25686 324 aa10.54□□□□□ -0.72
LRCH3-210ENST00000461674 FAM200AQ8TCP9 573 aa10.54□□□□□ -0.72
LRCH3-210ENST00000461674 TSC1Q92574 1164 aa10.54□□□□□ -0.72
LRCH3-210ENST00000461674 CDCA7Q9BWT1 371 aaPredicted RBP10.54□□□□□ -0.72
LRCH3-210ENST00000461674 PCDHGC3Q9UN70 934 aa10.54□□□□□ -0.72
LRCH3-210ENST00000461674 TAGLNQ01995 201 aaKnown RBP10.53□□□□□ -0.72
LRCH3-210ENST00000461674 PTK7Q13308 1070 aa10.53□□□□□ -0.72
LRCH3-210ENST00000461674 COL19A1Q14993 1142 aa10.53□□□□□ -0.72
LRCH3-210ENST00000461674 SWI5Q1ZZU3 235 aa10.53□□□□□ -0.72
LRCH3-210ENST00000461674 LZTS3O60299 673 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-210ENST00000461674 SKIP12755 728 aa10.52□□□□□ -0.73
LRCH3-210ENST00000461674 FOSBP53539 338 aa10.52□□□□□ -0.73
LRCH3-210ENST00000461674 NR1H3Q13133 447 aa10.52□□□□□ -0.73
LRCH3-210ENST00000461674 LARP1Q6PKG0 1096 aaKnown RBP10.52□□□□□ -0.73
LRCH3-210ENST00000461674 ASB16Q96NS5 453 aa10.52□□□□□ -0.73
LRCH3-210ENST00000461674 ARID4BQ4LE39 1312 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-210ENST00000461674 NOP9Q86U38 636 aaKnown RBP10.51□□□□□ -0.73
LRCH3-210ENST00000461674 RDH13Q8NBN7 331 aa10.51□□□□□ -0.73
LRCH3-210ENST00000461674 TMEM134Q9H6X4 195 aa10.51□□□□□ -0.73
LRCH3-210ENST00000461674 CFAP99D6REC4 459 aa10.5□□□□□ -0.73
LRCH3-210ENST00000461674 NR6A1Q15406 480 aa10.5□□□□□ -0.73
LRCH3-210ENST00000461674 IER5LQ5T953 404 aa10.5□□□□□ -0.73
LRCH3-210ENST00000461674 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
LRCH3-210ENST00000461674 SCAMP3O14828 347 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms