RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SLC4A3P48751 1232 aa19.77■□□□□ 0.76
LMNB1-203ENST00000460265 WWC1Q8IX03 1113 aa19.77■□□□□ 0.76
LMNB1-203ENST00000460265 PRDM15P57071 1507 aaPredicted RBP19.77■□□□□ 0.76
LMNB1-203ENST00000460265 NPATQ14207 1427 aa19.77■□□□□ 0.75
LMNB1-203ENST00000460265 PTPRTO14522 1441 aa19.76■□□□□ 0.75
LMNB1-203ENST00000460265 RPGRIP1LQ68CZ1 1315 aa19.75■□□□□ 0.75
LMNB1-203ENST00000460265 CDK19Q9BWU1 502 aa19.75■□□□□ 0.75
LMNB1-203ENST00000460265 ASXL1Q8IXJ9 1541 aa19.75■□□□□ 0.75
LMNB1-203ENST00000460265 E9PCH4 1651 aa19.74■□□□□ 0.75
LMNB1-203ENST00000460265 TSR2Q969E8 191 aaKnown RBP19.74■□□□□ 0.75
LMNB1-203ENST00000460265 ELL2O00472 640 aaPredicted RBP19.74■□□□□ 0.75
LMNB1-203ENST00000460265 TXNDC2Q86VQ3 553 aa19.74■□□□□ 0.75
LMNB1-203ENST00000460265 CLTCL1P53675 1640 aa19.73■□□□□ 0.75
LMNB1-203ENST00000460265 TRPM2O94759 1503 aa19.73■□□□□ 0.75
LMNB1-203ENST00000460265 HMOX1P09601 288 aa19.72■□□□□ 0.75
LMNB1-203ENST00000460265 POLR1AO95602 1720 aaPredicted RBP19.72■□□□□ 0.75
LMNB1-203ENST00000460265 SMC4Q9NTJ3 1288 aa19.71■□□□□ 0.75
LMNB1-203ENST00000460265 CENPQQ7L2Z9 268 aaPredicted RBP19.7■□□□□ 0.74
LMNB1-203ENST00000460265 NFKBIBQ15653 356 aa19.7■□□□□ 0.74
LMNB1-203ENST00000460265 ZMYND15Q9H091 742 aa19.7■□□□□ 0.74
LMNB1-203ENST00000460265 MYH16Q9H6N6 1097 aa19.7■□□□□ 0.74
LMNB1-203ENST00000460265 POGZQ7Z3K3 1410 aa19.69■□□□□ 0.74
LMNB1-203ENST00000460265 RIPK4P57078 832 aa19.69■□□□□ 0.74
LMNB1-203ENST00000460265 YEATS2Q9ULM3 1422 aa19.68■□□□□ 0.74
LMNB1-203ENST00000460265 DIAPH1O60610 1272 aaKnown RBP19.67■□□□□ 0.74
LMNB1-203ENST00000460265 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
LMNB1-203ENST00000460265 C14orf37Q86TY3 774 aa19.67■□□□□ 0.74
LMNB1-203ENST00000460265 BACH2Q9BYV9 841 aa19.66■□□□□ 0.74
LMNB1-203ENST00000460265 ITPRIPQ8IWB1 547 aa19.66■□□□□ 0.74
LMNB1-203ENST00000460265 FAM43AQ8N2R8 423 aa19.66■□□□□ 0.74
LMNB1-203ENST00000460265 DDRGK1Q96HY6 314 aa19.66■□□□□ 0.74
LMNB1-203ENST00000460265 ERVK-7P63135 1459 aa19.65■□□□□ 0.74
LMNB1-203ENST00000460265 TNNQ9UQP3 1299 aa19.64■□□□□ 0.73
LMNB1-203ENST00000460265 ZBTB7CA1YPR0 619 aa19.63■□□□□ 0.73
LMNB1-203ENST00000460265 EXOSC9Q06265 439 aaKnown RBP19.63■□□□□ 0.73
LMNB1-203ENST00000460265 BLMP54132 1417 aaPredicted RBP19.62■□□□□ 0.73
LMNB1-203ENST00000460265 SPHKAPQ2M3C7 1700 aa19.62■□□□□ 0.73
LMNB1-203ENST00000460265 MADDQ8WXG6 1647 aa19.62■□□□□ 0.73
LMNB1-203ENST00000460265 MS4A1P11836 297 aa19.61■□□□□ 0.73
LMNB1-203ENST00000460265 TET3O43151 1660 aa19.61■□□□□ 0.73
LMNB1-203ENST00000460265 FYB1O15117 783 aa19.61■□□□□ 0.73
LMNB1-203ENST00000460265 PODXL2Q9NZ53 605 aa19.61■□□□□ 0.73
LMNB1-203ENST00000460265 NCKAP5LQ9HCH0 1330 aa19.61■□□□□ 0.73
LMNB1-203ENST00000460265 CEBPAP49715 358 aaPredicted RBP19.6■□□□□ 0.73
LMNB1-203ENST00000460265 HDGFP51858 240 aaKnown RBP19.6■□□□□ 0.73
LMNB1-203ENST00000460265 SLC26A8Q96RN1 970 aa19.6■□□□□ 0.73
LMNB1-203ENST00000460265 PIK3C2GO75747 1445 aa19.6■□□□□ 0.73
LMNB1-203ENST00000460265 THUMPD2Q9BTF0 503 aaKnown RBP19.6■□□□□ 0.73
LMNB1-203ENST00000460265 PRKAR2BP31323 418 aa19.59■□□□□ 0.73
LMNB1-203ENST00000460265 ABCA9Q8IUA7 1624 aa19.59■□□□□ 0.73
LMNB1-203ENST00000460265 UPF2Q9HAU5 1272 aaKnown RBP19.59■□□□□ 0.73
LMNB1-203ENST00000460265 RRS1Q15050 365 aaKnown RBP19.58■□□□□ 0.73
LMNB1-203ENST00000460265 FAM161AQ3B820 660 aa19.58■□□□□ 0.73
LMNB1-203ENST00000460265 ARAP3Q8WWN8 1544 aa19.58■□□□□ 0.73
LMNB1-203ENST00000460265 IGHDP01880 384 aa19.57■□□□□ 0.72
LMNB1-203ENST00000460265 RARSP54136 660 aaKnown RBP19.57■□□□□ 0.72
LMNB1-203ENST00000460265 NKTRP30414 1462 aaKnown RBP19.57■□□□□ 0.72
LMNB1-203ENST00000460265 NAP1L5Q96NT1 182 aaPredicted RBP19.57■□□□□ 0.72
LMNB1-203ENST00000460265 NGEFQ8N5V2 710 aa19.57■□□□□ 0.72
LMNB1-203ENST00000460265 ZRANB1Q9UGI0 708 aa19.57■□□□□ 0.72
LMNB1-203ENST00000460265 TMPOP42166 694 aaKnown RBP19.56■□□□□ 0.72
LMNB1-203ENST00000460265 ZKSCAN2Q63HK3 967 aa19.56■□□□□ 0.72
LMNB1-203ENST00000460265 PNNQ9H307 717 aaKnown RBP19.56■□□□□ 0.72
LMNB1-203ENST00000460265 EFCAB6Q5THR3 1501 aa19.56■□□□□ 0.72
LMNB1-203ENST00000460265 NME9Q86XW9 330 aa19.56■□□□□ 0.72
LMNB1-203ENST00000460265 COG3Q96JB2 828 aa19.56■□□□□ 0.72
LMNB1-203ENST00000460265 KIF1BO60333 1816 aa19.56■□□□□ 0.72
LMNB1-203ENST00000460265 ZMYM4Q5VZL5 1548 aa19.55■□□□□ 0.72
LMNB1-203ENST00000460265 HSP90AA2PQ14568 343 aaPredicted RBP19.55■□□□□ 0.72
LMNB1-203ENST00000460265 SPRYD3Q8NCJ5 442 aa19.55■□□□□ 0.72
LMNB1-203ENST00000460265 EMILIN1Q9Y6C2 1016 aa19.55■□□□□ 0.72
LMNB1-203ENST00000460265 MLH3Q9UHC1 1453 aa19.55■□□□□ 0.72
LMNB1-203ENST00000460265 A0A1W2PP64 1363 aa19.55■□□□□ 0.72
LMNB1-203ENST00000460265 DZIP1LQ8IYY4 767 aaKnown RBP19.54■□□□□ 0.72
LMNB1-203ENST00000460265 RWDD1Q9H446 243 aaPredicted RBP19.54■□□□□ 0.72
LMNB1-203ENST00000460265 RNF17Q9BXT8 1623 aaKnown RBP19.54■□□□□ 0.72
LMNB1-203ENST00000460265 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
LMNB1-203ENST00000460265 ZNF521Q96K83 1311 aa19.53■□□□□ 0.72
LMNB1-203ENST00000460265 KIDINS220Q9ULH0 1771 aa19.53■□□□□ 0.72
LMNB1-203ENST00000460265 POLR3AO14802 1390 aaPredicted RBP19.53■□□□□ 0.72
LMNB1-203ENST00000460265 CEP152O94986 1710 aa19.53■□□□□ 0.72
LMNB1-203ENST00000460265 PDE3AQ14432 1141 aa19.53■□□□□ 0.72
LMNB1-203ENST00000460265 WDR63Q8IWG1 891 aa19.53■□□□□ 0.72
LMNB1-203ENST00000460265 INO80Q9ULG1 1556 aaPredicted RBP19.53■□□□□ 0.72
LMNB1-203ENST00000460265 ANKRD36BQ8N2N9 1353 aa19.53■□□□□ 0.72
LMNB1-203ENST00000460265 PMFBP1Q8TBY8 1022 aa19.52■□□□□ 0.72
LMNB1-203ENST00000460265 RLBP1P12271 317 aa19.52■□□□□ 0.72
LMNB1-203ENST00000460265 MAP3K4Q9Y6R4 1608 aa19.52■□□□□ 0.72
LMNB1-203ENST00000460265 ATAD2Q6PL18 1390 aa19.51■□□□□ 0.71
LMNB1-203ENST00000460265 KDM5AP29375 1690 aaKnown RBP19.51■□□□□ 0.71
LMNB1-203ENST00000460265 MYOM2P54296 1465 aa19.5■□□□□ 0.71
LMNB1-203ENST00000460265 FRAT2O75474 233 aaPredicted RBP19.5■□□□□ 0.71
LMNB1-203ENST00000460265 NUTM2GQ5VZR2 741 aa19.5■□□□□ 0.71
LMNB1-203ENST00000460265 NUDT16Q96DE0 195 aaKnown RBP19.5■□□□□ 0.71
LMNB1-203ENST00000460265 PPRC1Q5VV67 1664 aaKnown RBP19.5■□□□□ 0.71
LMNB1-203ENST00000460265 NGDNQ8NEJ9 315 aaKnown RBP19.5■□□□□ 0.71
LMNB1-203ENST00000460265 ARXQ96QS3 562 aa19.49■□□□□ 0.71
LMNB1-203ENST00000460265 ABCA6Q8N139 1617 aa19.49■□□□□ 0.71
LMNB1-203ENST00000460265 NOB1Q9ULX3 412 aaKnown RBP19.49■□□□□ 0.71
LMNB1-203ENST00000460265 SYNMO15061 1565 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms