RNA–Protein interactions for RNA: ENST00000460062.6

CSNK2A1-205, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 4

Gene CSNK2A1, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-205ENST00000460062 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
CSNK2A1-205ENST00000460062 UBAP1LF5GYI3 381 aa21.46■■□□□ 1.03
CSNK2A1-205ENST00000460062 NBPF1Q3BBV0 1214 aa21.46■■□□□ 1.03
CSNK2A1-205ENST00000460062 NBPF8Q3BBV2 869 aa21.46■■□□□ 1.03
CSNK2A1-205ENST00000460062 C14orf37Q86TY3 774 aa21.46■■□□□ 1.03
CSNK2A1-205ENST00000460062 ARHGEF28Q8N1W1 1705 aaKnown RBP21.44■■□□□ 1.02
CSNK2A1-205ENST00000460062 GPRASP1Q5JY77 1395 aa21.43■■□□□ 1.02
CSNK2A1-205ENST00000460062 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
CSNK2A1-205ENST00000460062 WAPLQ7Z5K2 1190 aa21.42■■□□□ 1.02
CSNK2A1-205ENST00000460062 CADPS2Q86UW7 1296 aa21.42■■□□□ 1.02
CSNK2A1-205ENST00000460062 TRAK1Q9UPV9 953 aa21.42■■□□□ 1.02
CSNK2A1-205ENST00000460062 ROCK2O75116 1388 aaKnown RBP21.41■■□□□ 1.02
CSNK2A1-205ENST00000460062 PLEKHH1Q9ULM0 1364 aa21.41■■□□□ 1.02
CSNK2A1-205ENST00000460062 ATF3P18847 181 aa21.4■■□□□ 1.02
CSNK2A1-205ENST00000460062 PRAM1Q96QH2 718 aa21.4■■□□□ 1.02
CSNK2A1-205ENST00000460062 CDC42BPGQ6DT37 1551 aa21.4■■□□□ 1.02
CSNK2A1-205ENST00000460062 CNKSR2Q8WXI2 1034 aa21.39■■□□□ 1.01
CSNK2A1-205ENST00000460062 POGKQ9P215 609 aa21.38■■□□□ 1.01
CSNK2A1-205ENST00000460062 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
CSNK2A1-205ENST00000460062 SLAIN2Q9P270 581 aa21.36■■□□□ 1.01
CSNK2A1-205ENST00000460062 MST1RQ04912 1400 aa21.34■■□□□ 1.01
CSNK2A1-205ENST00000460062 PIP4K2BP78356 416 aa21.33■■□□□ 1.01
CSNK2A1-205ENST00000460062 FMN2Q9NZ56 1722 aa21.32■■□□□ 1
CSNK2A1-205ENST00000460062 CARD11Q9BXL7 1154 aa21.32■■□□□ 1
CSNK2A1-205ENST00000460062 ROBO1Q9Y6N7 1651 aa21.31■■□□□ 1
CSNK2A1-205ENST00000460062 SAFB2Q14151 953 aaKnown RBP eCLIP21.31■■□□□ 1
CSNK2A1-205ENST00000460062 EIF3AQ14152 1382 aaKnown RBP21.31■■□□□ 1
CSNK2A1-205ENST00000460062 QRICH2Q9H0J4 1663 aa21.3■■□□□ 1
CSNK2A1-205ENST00000460062 CENPJQ9HC77 1338 aaPredicted RBP21.29■■□□□ 1
CSNK2A1-205ENST00000460062 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
CSNK2A1-205ENST00000460062 MINK1Q8N4C8 1332 aaPredicted RBP21.28■■□□□ 1
CSNK2A1-205ENST00000460062 ANKARQ7Z5J8 1434 aa21.24■□□□□ 0.99
CSNK2A1-205ENST00000460062 WASLO00401 505 aaPredicted RBP21.24■□□□□ 0.99
CSNK2A1-205ENST00000460062 BRINP3Q76B58 766 aa21.24■□□□□ 0.99
CSNK2A1-205ENST00000460062 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
CSNK2A1-205ENST00000460062 SBNO2Q9Y2G9 1366 aa21.23■□□□□ 0.99
CSNK2A1-205ENST00000460062 RGPD8O14715 1765 aaPredicted RBP21.23■□□□□ 0.99
CSNK2A1-205ENST00000460062 TULP4Q9NRJ4 1543 aa21.22■□□□□ 0.99
CSNK2A1-205ENST00000460062 AHDC1Q5TGY3 1603 aaPredicted RBP21.22■□□□□ 0.99
CSNK2A1-205ENST00000460062 USP32Q8NFA0 1604 aa21.22■□□□□ 0.99
CSNK2A1-205ENST00000460062 NHSL1Q5SYE7 1610 aa21.2■□□□□ 0.98
CSNK2A1-205ENST00000460062 HSPA1LP34931 641 aa21.19■□□□□ 0.98
CSNK2A1-205ENST00000460062 USP47Q96K76 1375 aa21.19■□□□□ 0.98
CSNK2A1-205ENST00000460062 KIF1AQ12756 1690 aa21.18■□□□□ 0.98
CSNK2A1-205ENST00000460062 PHLPP1O60346 1717 aa21.18■□□□□ 0.98
CSNK2A1-205ENST00000460062 NPM3O75607 178 aaKnown RBP21.18■□□□□ 0.98
CSNK2A1-205ENST00000460062 ORAI2Q96SN7 254 aa21.18■□□□□ 0.98
CSNK2A1-205ENST00000460062 CDK19Q9BWU1 502 aa21.18■□□□□ 0.98
CSNK2A1-205ENST00000460062 ITSN1Q15811 1721 aa21.18■□□□□ 0.98
CSNK2A1-205ENST00000460062 NUTM2FA1L443 756 aa21.17■□□□□ 0.98
CSNK2A1-205ENST00000460062 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
CSNK2A1-205ENST00000460062 ATP7BP35670 1465 aa21.16■□□□□ 0.98
CSNK2A1-205ENST00000460062 EVC2Q86UK5 1308 aa21.16■□□□□ 0.98
CSNK2A1-205ENST00000460062 PRR36Q9H6K5 1346 aa21.15■□□□□ 0.98
CSNK2A1-205ENST00000460062 SLC24A1O60721 1099 aa21.15■□□□□ 0.98
CSNK2A1-205ENST00000460062 COL16A1Q07092 1604 aaPredicted RBP21.15■□□□□ 0.98
CSNK2A1-205ENST00000460062 ST20-MTHFSA0A0A6YYL1 179 aa21.14■□□□□ 0.97
CSNK2A1-205ENST00000460062 TOPAZ1Q8N9V7 1692 aa21.14■□□□□ 0.97
CSNK2A1-205ENST00000460062 NUDT16Q96DE0 195 aaKnown RBP21.13■□□□□ 0.97
CSNK2A1-205ENST00000460062 TESK2Q96S53 571 aa21.12■□□□□ 0.97
CSNK2A1-205ENST00000460062 PHF8Q9UPP1 1060 aa21.12■□□□□ 0.97
CSNK2A1-205ENST00000460062 NPHP3Q7Z494 1330 aa21.11■□□□□ 0.97
CSNK2A1-205ENST00000460062 SRPK2P78362 688 aaKnown RBP21.11■□□□□ 0.97
CSNK2A1-205ENST00000460062 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
CSNK2A1-205ENST00000460062 SOS2Q07890 1332 aaPredicted RBP21.09■□□□□ 0.97
CSNK2A1-205ENST00000460062 CABP2Q9NPB3 220 aa21.09■□□□□ 0.97
CSNK2A1-205ENST00000460062 FOXO3O43524 673 aa21.08■□□□□ 0.97
CSNK2A1-205ENST00000460062 PUS7Q96PZ0 661 aaKnown RBP21.08■□□□□ 0.97
CSNK2A1-205ENST00000460062 PXDNQ92626 1479 aa21.07■□□□□ 0.96
CSNK2A1-205ENST00000460062 EIF4G2P78344 907 aaKnown RBP eCLIP21.07■□□□□ 0.96
CSNK2A1-205ENST00000460062 DDX17Q92841 729 aaKnown RBP21.07■□□□□ 0.96
CSNK2A1-205ENST00000460062 ATAD2Q6PL18 1390 aa21.07■□□□□ 0.96
CSNK2A1-205ENST00000460062 PLEKHG3A1L390 1219 aa21.06■□□□□ 0.96
CSNK2A1-205ENST00000460062 PPIP5K1Q6PFW1 1433 aa21.04■□□□□ 0.96
CSNK2A1-205ENST00000460062 PMFBP1Q8TBY8 1022 aa21.04■□□□□ 0.96
CSNK2A1-205ENST00000460062 LRRC59Q96AG4 307 aaKnown RBP21.04■□□□□ 0.96
CSNK2A1-205ENST00000460062 POLR3AO14802 1390 aaPredicted RBP21.04■□□□□ 0.96
CSNK2A1-205ENST00000460062 JCADQ9P266 1359 aa21.04■□□□□ 0.96
CSNK2A1-205ENST00000460062 SHPRHQ149N8 1683 aa21.04■□□□□ 0.96
CSNK2A1-205ENST00000460062 TMF1P82094 1093 aa21.02■□□□□ 0.96
CSNK2A1-205ENST00000460062 HSPA5P11021 654 aaKnown RBP21.01■□□□□ 0.95
CSNK2A1-205ENST00000460062 PSME1Q06323 249 aa21.01■□□□□ 0.95
CSNK2A1-205ENST00000460062 KRT28Q7Z3Y7 464 aa21.01■□□□□ 0.95
CSNK2A1-205ENST00000460062 NGDNQ8NEJ9 315 aaKnown RBP21.01■□□□□ 0.95
CSNK2A1-205ENST00000460062 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
CSNK2A1-205ENST00000460062 SBNO1A3KN83 1393 aa21■□□□□ 0.95
CSNK2A1-205ENST00000460062 DISP3Q9P2K9 1392 aa21■□□□□ 0.95
CSNK2A1-205ENST00000460062 XPCQ01831 940 aaPredicted RBP20.99■□□□□ 0.95
CSNK2A1-205ENST00000460062 CDCA8Q53HL2 280 aa20.99■□□□□ 0.95
CSNK2A1-205ENST00000460062 CABP1Q9NZU7 370 aa20.99■□□□□ 0.95
CSNK2A1-205ENST00000460062 ACEP12821 1306 aa20.99■□□□□ 0.95
CSNK2A1-205ENST00000460062 PNPLA6Q8IY17 1366 aa20.97■□□□□ 0.95
CSNK2A1-205ENST00000460062 AKAP12Q02952 1782 aa20.97■□□□□ 0.95
CSNK2A1-205ENST00000460062 SPATA31A3Q5VYP0 1347 aa20.97■□□□□ 0.95
CSNK2A1-205ENST00000460062 NINLQ9Y2I6 1382 aa20.97■□□□□ 0.95
CSNK2A1-205ENST00000460062 COL22A1Q8NFW1 1626 aaPredicted RBP20.96■□□□□ 0.95
CSNK2A1-205ENST00000460062 SPATA31A6Q5VVP1 1343 aa20.96■□□□□ 0.95
CSNK2A1-205ENST00000460062 BRD4O60885 1362 aaPredicted RBP20.96■□□□□ 0.95
CSNK2A1-205ENST00000460062 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.95
CSNK2A1-205ENST00000460062 ZEB1P37275 1124 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms