RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 FMNL2Q96PY5 1086 aa14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 IBSPP21815 317 aaPredicted RBP14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 CCDC191Q8NCU4 936 aa14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 PNISRQ8TF01 805 aaKnown RBP14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 POLR3GO15318 223 aaPredicted RBP14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 SMC2O95347 1197 aa14.86□□□□□ -0.03
NEDD4L-208ENST00000456173 CARMIL1Q5VZK9 1371 aa14.86□□□□□ -0.03
NEDD4L-208ENST00000456173 ERCC4Q92889 916 aaPredicted RBP14.86□□□□□ -0.03
NEDD4L-208ENST00000456173 IPO7O95373 1038 aaKnown RBP14.86□□□□□ -0.03
NEDD4L-208ENST00000456173 FAM177A1Q8N128 213 aaPredicted RBP14.85□□□□□ -0.03
NEDD4L-208ENST00000456173 BRD4O60885 1362 aaPredicted RBP14.85□□□□□ -0.03
NEDD4L-208ENST00000456173 ZKSCAN1P17029 563 aaPredicted RBP14.85□□□□□ -0.03
NEDD4L-208ENST00000456173 USP8P40818 1118 aa14.85□□□□□ -0.03
NEDD4L-208ENST00000456173 CCDC192P0DO97 292 aa14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 AAMPQ13685 434 aa14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 PAXIP1Q6ZW49 1069 aaPredicted RBP14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 TNPO1Q92973 898 aaKnown RBP14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 DNAJC2Q99543 621 aaKnown RBP14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 SDF4Q9BRK5 362 aa14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 STK26Q9P289 416 aa14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 RRP12Q5JTH9 1297 aaKnown RBP14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 GIMAP7Q8NHV1 300 aa14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 ZFP91Q96JP5 570 aaPredicted RBP14.84□□□□□ -0.03
NEDD4L-208ENST00000456173 CDR1P51861 262 aa14.83□□□□□ -0.03
NEDD4L-208ENST00000456173 KIAA0754O94854 1291 aa14.83□□□□□ -0.04
NEDD4L-208ENST00000456173 NBPF1Q3BBV0 1214 aa14.83□□□□□ -0.04
NEDD4L-208ENST00000456173 CENPHQ9H3R5 247 aa14.83□□□□□ -0.04
NEDD4L-208ENST00000456173 CWC22Q9HCG8 908 aaKnown RBP14.83□□□□□ -0.04
NEDD4L-208ENST00000456173 C20orf194Q5TEA3 1177 aa14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 NAT10Q9H0A0 1025 aaKnown RBP14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 GTF2A1P52655 376 aaPredicted RBP14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 TMCO3Q6UWJ1 677 aa14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 CCDC18Q5T9S5 1454 aa14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 FILIP1Q7Z7B0 1213 aa14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 SMAP1Q8IYB5 467 aaPredicted RBP14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 GTPBP4Q9BZE4 634 aaKnown RBP14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 CT47B1P0C2W7 299 aaPredicted RBP14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 UBXN4Q92575 508 aa14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 CCDC94Q9BW85 323 aaPredicted RBP14.82□□□□□ -0.04
NEDD4L-208ENST00000456173 SSFA2P28290 1259 aa14.81□□□□□ -0.04
NEDD4L-208ENST00000456173 PDE3AQ14432 1141 aa14.81□□□□□ -0.04
NEDD4L-208ENST00000456173 HDGFL2Q7Z4V5 671 aaPredicted RBP14.81□□□□□ -0.04
NEDD4L-208ENST00000456173 PCMTD1Q96MG8 357 aaPredicted RBP14.81□□□□□ -0.04
NEDD4L-208ENST00000456173 USP25Q9UHP3 1055 aa14.81□□□□□ -0.04
NEDD4L-208ENST00000456173 CCDC102AQ96A19 550 aa14.8□□□□□ -0.04
NEDD4L-208ENST00000456173 BICRAQ9NZM4 1560 aa14.8□□□□□ -0.04
NEDD4L-208ENST00000456173 CAGE1Q8TC20 777 aa14.8□□□□□ -0.04
NEDD4L-208ENST00000456173 C16orf45Q96MC5 204 aaPredicted RBP14.8□□□□□ -0.04
NEDD4L-208ENST00000456173 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
NEDD4L-208ENST00000456173 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.8□□□□□ -0.04
NEDD4L-208ENST00000456173 NOL10Q9BSC4 688 aaKnown RBP14.79□□□□□ -0.04
NEDD4L-208ENST00000456173 RUSC2Q8N2Y8 1516 aa14.79□□□□□ -0.04
NEDD4L-208ENST00000456173 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
NEDD4L-208ENST00000456173 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
NEDD4L-208ENST00000456173 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
NEDD4L-208ENST00000456173 NCAPD3P42695 1498 aa14.79□□□□□ -0.04
NEDD4L-208ENST00000456173 EIF3JO75822 258 aaKnown RBP14.78□□□□□ -0.04
NEDD4L-208ENST00000456173 MCM5P33992 734 aa14.78□□□□□ -0.04
NEDD4L-208ENST00000456173 OFD1O75665 1012 aa14.78□□□□□ -0.04
NEDD4L-208ENST00000456173 NESP48681 1621 aa14.78□□□□□ -0.04
NEDD4L-208ENST00000456173 NGEFQ8N5V2 710 aa14.78□□□□□ -0.04
NEDD4L-208ENST00000456173 RUFY2Q8WXA3 655 aa14.78□□□□□ -0.04
NEDD4L-208ENST00000456173 PRIMPOLQ96LW4 560 aa14.77□□□□□ -0.04
NEDD4L-208ENST00000456173 TNMDQ9H2S6 317 aa14.77□□□□□ -0.04
NEDD4L-208ENST00000456173 CCP110O43303 1012 aa14.77□□□□□ -0.04
NEDD4L-208ENST00000456173 DCTN1Q14203 1278 aa14.77□□□□□ -0.04
NEDD4L-208ENST00000456173 PTPN14Q15678 1187 aa14.77□□□□□ -0.04
NEDD4L-208ENST00000456173 ZNF830Q96NB3 372 aaPredicted RBP14.77□□□□□ -0.05
NEDD4L-208ENST00000456173 FAM193AP78312 1265 aa14.77□□□□□ -0.05
NEDD4L-208ENST00000456173 C1orf115Q9H7X2 142 aa14.76□□□□□ -0.05
NEDD4L-208ENST00000456173 CEBPZQ03701 1054 aaKnown RBP14.76□□□□□ -0.05
NEDD4L-208ENST00000456173 KINO60870 393 aaKnown RBP14.76□□□□□ -0.05
NEDD4L-208ENST00000456173 SPAG9O60271 1321 aaKnown RBP14.76□□□□□ -0.05
NEDD4L-208ENST00000456173 ERLIN1O75477 346 aa14.76□□□□□ -0.05
NEDD4L-208ENST00000456173 RUNDC1Q96C34 613 aa14.76□□□□□ -0.05
NEDD4L-208ENST00000456173 TRIM34Q9BYJ4 488 aa14.76□□□□□ -0.05
NEDD4L-208ENST00000456173 TOMM22Q9NS69 142 aa14.76□□□□□ -0.05
NEDD4L-208ENST00000456173 ANKRD20A12PQ8NF67 263 aa14.75□□□□□ -0.05
NEDD4L-208ENST00000456173 FAM177BA6PVY3 158 aa14.75□□□□□ -0.05
NEDD4L-208ENST00000456173 MCM2P49736 904 aa14.75□□□□□ -0.05
NEDD4L-208ENST00000456173 WDR33Q9C0J8 1336 aaKnown RBP14.75□□□□□ -0.05
NEDD4L-208ENST00000456173 NAP1L1P55209 391 aaKnown RBP14.75□□□□□ -0.05
NEDD4L-208ENST00000456173 RIPK4P57078 832 aa14.75□□□□□ -0.05
NEDD4L-208ENST00000456173 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
NEDD4L-208ENST00000456173 API5Q9BZZ5 524 aaKnown RBP14.75□□□□□ -0.05
NEDD4L-208ENST00000456173 LMOD3Q0VAK6 560 aa14.74□□□□□ -0.05
NEDD4L-208ENST00000456173 CEP89Q96ST8 783 aa14.74□□□□□ -0.05
NEDD4L-208ENST00000456173 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
NEDD4L-208ENST00000456173 RBM27Q9P2N5 1060 aaKnown RBP14.74□□□□□ -0.05
NEDD4L-208ENST00000456173 KRT222Q8N1A0 295 aa14.74□□□□□ -0.05
NEDD4L-208ENST00000456173 RNF20Q5VTR2 975 aa14.74□□□□□ -0.05
NEDD4L-208ENST00000456173 ZNF526Q8TF50 670 aaPredicted RBP14.74□□□□□ -0.05
NEDD4L-208ENST00000456173 OLFM4Q6UX06 510 aa14.73□□□□□ -0.05
NEDD4L-208ENST00000456173 KIF18AQ8NI77 898 aa14.73□□□□□ -0.05
NEDD4L-208ENST00000456173 CPLX1O14810 134 aa14.72□□□□□ -0.05
NEDD4L-208ENST00000456173 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.72□□□□□ -0.05
NEDD4L-208ENST00000456173 WDR97A6NE52 1622 aa14.72□□□□□ -0.05
NEDD4L-208ENST00000456173 LMAN1P49257 510 aa14.72□□□□□ -0.05
NEDD4L-208ENST00000456173 TRMT1Q9NXH9 659 aaKnown RBP14.72□□□□□ -0.05
NEDD4L-208ENST00000456173 ADCY5O95622 1261 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms