RNA–Protein interactions for RNA: ENST00000455540.2

CYCSP53-201, Transcript of cytochrome c, somatic pseudogene 53, humanhuman

BASIC

Gene CYCSP53, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP53-201ENST00000455540 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
CYCSP53-201ENST00000455540 LIMD1Q9UGP4 676 aa12.28□□□□□ -0.44
CYCSP53-201ENST00000455540 MTMR2Q13614 643 aa12.27□□□□□ -0.45
CYCSP53-201ENST00000455540 SPSB2Q99619 263 aa12.27□□□□□ -0.45
CYCSP53-201ENST00000455540 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.27□□□□□ -0.45
CYCSP53-201ENST00000455540 PCDHGC3Q9UN70 934 aa12.27□□□□□ -0.45
CYCSP53-201ENST00000455540 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
CYCSP53-201ENST00000455540 THAP11Q96EK4 314 aa12.26□□□□□ -0.45
CYCSP53-201ENST00000455540 LILRB3O75022 631 aa12.25□□□□□ -0.45
CYCSP53-201ENST00000455540 ADH1BP00325 375 aa12.25□□□□□ -0.45
CYCSP53-201ENST00000455540 RETREG3Q86VR2 466 aa12.25□□□□□ -0.45
CYCSP53-201ENST00000455540 HLA-CQ95604 372 aa12.25□□□□□ -0.45
CYCSP53-201ENST00000455540 USB1Q9BQ65 265 aaKnown RBP12.25□□□□□ -0.45
CYCSP53-201ENST00000455540 PCDHB15Q9Y5E8 787 aa12.25□□□□□ -0.45
CYCSP53-201ENST00000455540 NUTM2BA6NNL0 878 aaPredicted RBP12.24□□□□□ -0.45
CYCSP53-201ENST00000455540 NUTM2EB1AL46 878 aaPredicted RBP12.24□□□□□ -0.45
CYCSP53-201ENST00000455540 GUCA2AQ02747 115 aa12.24□□□□□ -0.45
CYCSP53-201ENST00000455540 NUTM2DQ5VT03 806 aaPredicted RBP12.24□□□□□ -0.45
CYCSP53-201ENST00000455540 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
CYCSP53-201ENST00000455540 ZNF516Q92618 1163 aa12.24□□□□□ -0.45
CYCSP53-201ENST00000455540 HRCP23327 699 aa12.23□□□□□ -0.45
CYCSP53-201ENST00000455540 PROCA1Q8NCQ7 364 aaPredicted RBP12.23□□□□□ -0.45
CYCSP53-201ENST00000455540 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
CYCSP53-201ENST00000455540 GGCXP38435 758 aa12.21□□□□□ -0.45
CYCSP53-201ENST00000455540 CSPP1Q1MSJ5 1256 aa12.21□□□□□ -0.45
CYCSP53-201ENST00000455540 MSS51Q4VC12 460 aa12.21□□□□□ -0.45
CYCSP53-201ENST00000455540 DESI1Q6ICB0 168 aa12.2□□□□□ -0.46
CYCSP53-201ENST00000455540 RNF19BQ6ZMZ0 732 aa12.2□□□□□ -0.46
CYCSP53-201ENST00000455540 PLA2G2EQ9NZK7 142 aa12.2□□□□□ -0.46
CYCSP53-201ENST00000455540 QPCTQ16769 361 aa12.18□□□□□ -0.46
CYCSP53-201ENST00000455540 SLC6A16Q9GZN6 736 aa12.18□□□□□ -0.46
CYCSP53-201ENST00000455540 TMEM259Q4ZIN3 620 aa12.17□□□□□ -0.46
CYCSP53-201ENST00000455540 HELBQ8NG08 1087 aaPredicted RBP12.16□□□□□ -0.46
CYCSP53-201ENST00000455540 PRR7Q8TB68 274 aa12.16□□□□□ -0.46
CYCSP53-201ENST00000455540 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
CYCSP53-201ENST00000455540 SYMPKQ92797 1274 aaKnown RBP12.16□□□□□ -0.46
CYCSP53-201ENST00000455540 FAM160A2Q8N612 972 aaPredicted RBP12.15□□□□□ -0.46
CYCSP53-201ENST00000455540 TLL1O43897 1013 aa12.14□□□□□ -0.47
CYCSP53-201ENST00000455540 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
CYCSP53-201ENST00000455540 RFC5P40937 340 aa12.13□□□□□ -0.47
CYCSP53-201ENST00000455540 MMP16P51512 607 aa12.13□□□□□ -0.47
CYCSP53-201ENST00000455540 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
CYCSP53-201ENST00000455540 JUNDP17535 347 aa12.12□□□□□ -0.47
CYCSP53-201ENST00000455540 DXOO77932 396 aaKnown RBP12.11□□□□□ -0.47
CYCSP53-201ENST00000455540 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.11□□□□□ -0.47
CYCSP53-201ENST00000455540 CFAP99D6REC4 459 aa12.1□□□□□ -0.47
CYCSP53-201ENST00000455540 BANK1Q8NDB2 785 aa12.1□□□□□ -0.47
CYCSP53-201ENST00000455540 S1PR4O95977 384 aa12.08□□□□□ -0.48
CYCSP53-201ENST00000455540 PTPRNQ16849 979 aa12.08□□□□□ -0.48
CYCSP53-201ENST00000455540 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
CYCSP53-201ENST00000455540 LYPD8Q6UX82 237 aa12.08□□□□□ -0.48
CYCSP53-201ENST00000455540 ANKLE1Q8NAG6 615 aa12.07□□□□□ -0.48
CYCSP53-201ENST00000455540 TSC1Q92574 1164 aa12.07□□□□□ -0.48
CYCSP53-201ENST00000455540 AP1G2O75843 785 aa12.06□□□□□ -0.48
CYCSP53-201ENST00000455540 A0A0G2JS52 829 aa12.05□□□□□ -0.48
CYCSP53-201ENST00000455540 RNF223E7ERA6 249 aa12.04□□□□□ -0.48
CYCSP53-201ENST00000455540 APBB1O00213 710 aa12.04□□□□□ -0.48
CYCSP53-201ENST00000455540 SOCS7O14512 581 aa12.03□□□□□ -0.48
CYCSP53-201ENST00000455540 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
CYCSP53-201ENST00000455540 PRDM9Q9NQV7 894 aa12.03□□□□□ -0.48
CYCSP53-201ENST00000455540 CCNYL3P0C7X3 344 aa12.02□□□□□ -0.49
CYCSP53-201ENST00000455540 CTDSPL2Q05D32 466 aa12.02□□□□□ -0.49
CYCSP53-201ENST00000455540 EVA1BQ9NVM1 165 aa12.02□□□□□ -0.49
CYCSP53-201ENST00000455540 FLIIQ13045 1269 aa12.01□□□□□ -0.49
CYCSP53-201ENST00000455540 FBXO31Q5XUX0 539 aaPredicted RBP12.01□□□□□ -0.49
CYCSP53-201ENST00000455540 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
CYCSP53-201ENST00000455540 RGS20O76081 388 aa11.99□□□□□ -0.49
CYCSP53-201ENST00000455540 USP17L8P0C7I0 530 aa11.99□□□□□ -0.49
CYCSP53-201ENST00000455540 ZBTB24O43167 697 aaPredicted RBP11.98□□□□□ -0.49
CYCSP53-201ENST00000455540 CCDC24Q8N4L8 307 aa11.98□□□□□ -0.49
CYCSP53-201ENST00000455540 PNMA1Q8ND90 353 aa11.98□□□□□ -0.49
CYCSP53-201ENST00000455540 KCNH2Q12809 1159 aa11.97□□□□□ -0.49
CYCSP53-201ENST00000455540 PRM3Q9NNZ6 103 aa11.97□□□□□ -0.49
CYCSP53-201ENST00000455540 PER1O15534 1290 aaPredicted RBP11.96□□□□□ -0.49
CYCSP53-201ENST00000455540 ARMC2Q8NEN0 867 aa11.96□□□□□ -0.49
CYCSP53-201ENST00000455540 GTF3C3Q9Y5Q9 886 aa11.96□□□□□ -0.49
CYCSP53-201ENST00000455540 PPEF1O14829 653 aaPredicted RBP11.95□□□□□ -0.5
CYCSP53-201ENST00000455540 CTHP32929 405 aa11.95□□□□□ -0.5
CYCSP53-201ENST00000455540 RPIAP49247 311 aa11.95□□□□□ -0.5
CYCSP53-201ENST00000455540 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
CYCSP53-201ENST00000455540 F12P00748 615 aaPredicted RBP11.94□□□□□ -0.5
CYCSP53-201ENST00000455540 LRRN4Q8WUT4 740 aa11.93□□□□□ -0.5
CYCSP53-201ENST00000455540 V9GY48 417 aaPredicted RBP11.92□□□□□ -0.5
CYCSP53-201ENST00000455540 SLC19A1P41440 591 aa11.9□□□□□ -0.5
CYCSP53-201ENST00000455540 GPKOWQ92917 476 aaPredicted RBP eCLIP11.9□□□□□ -0.5
CYCSP53-201ENST00000455540 UNC93B1Q9H1C4 597 aa11.89□□□□□ -0.51
CYCSP53-201ENST00000455540 SNRKQ9NRH2 765 aa11.89□□□□□ -0.51
CYCSP53-201ENST00000455540 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
CYCSP53-201ENST00000455540 MCM6Q14566 821 aa11.88□□□□□ -0.51
CYCSP53-201ENST00000455540 MAP10Q9P2G4 905 aa11.88□□□□□ -0.51
CYCSP53-201ENST00000455540 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
CYCSP53-201ENST00000455540 MTMR14Q8NCE2 650 aa11.87□□□□□ -0.51
CYCSP53-201ENST00000455540 NR6A1Q15406 480 aa11.86□□□□□ -0.51
CYCSP53-201ENST00000455540 PTCRAQ6ISU1 281 aaPredicted RBP11.86□□□□□ -0.51
CYCSP53-201ENST00000455540 ERICH6Q7L0X2 663 aa11.86□□□□□ -0.51
CYCSP53-201ENST00000455540 TRIM32Q13049 653 aa11.85□□□□□ -0.51
CYCSP53-201ENST00000455540 PLA2G2CQ5R387 149 aa11.85□□□□□ -0.51
CYCSP53-201ENST00000455540 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
CYCSP53-201ENST00000455540 PRKD2Q9BZL6 878 aa11.85□□□□□ -0.51
CYCSP53-201ENST00000455540 HMX1Q9NP08 348 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms