RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 NLRP7Q8WX94 980 aa5.29□□□□□ -1.56
HMGB3P8-201ENST00000449709 TRAIPQ9BWF2 469 aa5.29□□□□□ -1.56
HMGB3P8-201ENST00000449709 SNRKQ9NRH2 765 aa5.29□□□□□ -1.56
HMGB3P8-201ENST00000449709 RFC5P40937 340 aa5.28□□□□□ -1.56
HMGB3P8-201ENST00000449709 FBXO31Q5XUX0 539 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P8-201ENST00000449709 CCDC97Q96F63 343 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P8-201ENST00000449709 TBC1D2Q9BYX2 928 aa5.28□□□□□ -1.56
HMGB3P8-201ENST00000449709 ATP1B4Q9UN42 357 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P8-201ENST00000449709 APLP1P51693 650 aa5.27□□□□□ -1.57
HMGB3P8-201ENST00000449709 DIXDC1Q155Q3 683 aa5.27□□□□□ -1.57
HMGB3P8-201ENST00000449709 PPP2R2DQ66LE6 453 aa5.27□□□□□ -1.57
HMGB3P8-201ENST00000449709 MTRQ99707 1265 aa5.27□□□□□ -1.57
HMGB3P8-201ENST00000449709 RBM27Q9P2N5 1060 aaKnown RBP5.27□□□□□ -1.57
HMGB3P8-201ENST00000449709 CCDC9Q9Y3X0 531 aaKnown RBP5.27□□□□□ -1.57
HMGB3P8-201ENST00000449709 TMEM259Q4ZIN3 620 aa5.26□□□□□ -1.57
HMGB3P8-201ENST00000449709 SWT1Q5T5J6 900 aaKnown RBP5.26□□□□□ -1.57
HMGB3P8-201ENST00000449709 ZNF516Q92618 1163 aa5.26□□□□□ -1.57
HMGB3P8-201ENST00000449709 HDGFP51858 240 aaKnown RBP5.25□□□□□ -1.57
HMGB3P8-201ENST00000449709 TUSC1Q2TAM9 212 aa5.25□□□□□ -1.57
HMGB3P8-201ENST00000449709 PKNOX2Q96KN3 472 aa5.25□□□□□ -1.57
HMGB3P8-201ENST00000449709 IL21Q9HBE4 155 aa5.25□□□□□ -1.57
HMGB3P8-201ENST00000449709 LIMD1Q9UGP4 676 aa5.25□□□□□ -1.57
HMGB3P8-201ENST00000449709 ZNF330Q9Y3S2 320 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P8-201ENST00000449709 RIC3Q7Z5B4 369 aa5.24□□□□□ -1.57
HMGB3P8-201ENST00000449709 KCTD17Q8N5Z5 321 aa5.24□□□□□ -1.57
HMGB3P8-201ENST00000449709 SPIRE2Q8WWL2 714 aa5.24□□□□□ -1.57
HMGB3P8-201ENST00000449709 EYA1Q99502 592 aa5.24□□□□□ -1.57
HMGB3P8-201ENST00000449709 SPTLC1O15269 473 aa5.23□□□□□ -1.57
HMGB3P8-201ENST00000449709 PPP1R18Q6NYC8 613 aa5.23□□□□□ -1.57
HMGB3P8-201ENST00000449709 MTMR14Q8NCE2 650 aa5.23□□□□□ -1.57
HMGB3P8-201ENST00000449709 NKX2-3Q8TAU0 364 aa5.23□□□□□ -1.57
HMGB3P8-201ENST00000449709 RBM46Q8TBY0 533 aaKnown RBP5.23□□□□□ -1.57
HMGB3P8-201ENST00000449709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.22□□□□□ -1.57
HMGB3P8-201ENST00000449709 SOCS7O14512 581 aa5.22□□□□□ -1.57
HMGB3P8-201ENST00000449709 CD46P15529 392 aa5.22□□□□□ -1.57
HMGB3P8-201ENST00000449709 COPS2P61201 443 aa5.22□□□□□ -1.57
HMGB3P8-201ENST00000449709 Q6ZNB5 142 aa5.22□□□□□ -1.57
HMGB3P8-201ENST00000449709 SLF2Q8IX21 1173 aa5.22□□□□□ -1.57
HMGB3P8-201ENST00000449709 GDPD2Q9HCC8 539 aa5.22□□□□□ -1.57
HMGB3P8-201ENST00000449709 RCCD1A6NED2 376 aa5.21□□□□□ -1.58
HMGB3P8-201ENST00000449709 RSBN1LQ6PCB5 846 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P8-201ENST00000449709 RETREG2Q8NC44 543 aa5.21□□□□□ -1.58
HMGB3P8-201ENST00000449709 PRKD2Q9BZL6 878 aa5.21□□□□□ -1.58
HMGB3P8-201ENST00000449709 LILRB3O75022 631 aa5.2□□□□□ -1.58
HMGB3P8-201ENST00000449709 PPP1R15AO75807 674 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P8-201ENST00000449709 GJA5P36382 358 aa5.2□□□□□ -1.58
HMGB3P8-201ENST00000449709 GFRA3O60609 400 aa5.19□□□□□ -1.58
HMGB3P8-201ENST00000449709 IRF5Q13568 498 aa5.19□□□□□ -1.58
HMGB3P8-201ENST00000449709 DIEXFQ68CQ4 756 aaKnown RBP5.19□□□□□ -1.58
HMGB3P8-201ENST00000449709 AEBP1Q8IUX7 1158 aa5.19□□□□□ -1.58
HMGB3P8-201ENST00000449709 WWC1Q8IX03 1113 aa5.19□□□□□ -1.58
HMGB3P8-201ENST00000449709 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.19□□□□□ -1.58
HMGB3P8-201ENST00000449709 SALL2Q9Y467 1007 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P8-201ENST00000449709 SUPT16HQ9Y5B9 1047 aaKnown RBP5.19□□□□□ -1.58
HMGB3P8-201ENST00000449709 MOXD2PA6NHM9 499 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 POM121CA8CG34 1229 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 LCE2BO14633 110 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 DNAJB2P25686 324 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 ABL2P42684 1182 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 SLC4A3P48751 1232 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 QPCTQ16769 361 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 NUTM1Q86Y26 1132 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 SULF1Q8IWU6 871 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 CALR3Q96L12 384 aaKnown RBP5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 PRM3Q9NNZ6 103 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 FANCIQ9NVI1 1328 aa5.18□□□□□ -1.58
HMGB3P8-201ENST00000449709 ZPR1O75312 459 aa5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 NDUFV2P19404 249 aa5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 CSPP1Q1MSJ5 1256 aa5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 RTL5Q5HYW3 569 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 BLOC1S3Q6QNY0 202 aa5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 GLMNQ92990 594 aa5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 TMEM134Q9H6X4 195 aa5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 TBC1D2BQ9UPU7 963 aa5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 PCDHB3Q9Y5E6 796 aa5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 PCDHB15Q9Y5E8 787 aa5.17□□□□□ -1.58
HMGB3P8-201ENST00000449709 DDX11L8A8MPP1 907 aa5.16□□□□□ -1.58
HMGB3P8-201ENST00000449709 AP1G2O75843 785 aa5.16□□□□□ -1.58
HMGB3P8-201ENST00000449709 LAPTM4AQ15012 233 aa5.16□□□□□ -1.58
HMGB3P8-201ENST00000449709 V9GY48 417 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P8-201ENST00000449709 TLL1O43897 1013 aa5.15□□□□□ -1.59
HMGB3P8-201ENST00000449709 CFHP08603 1231 aa5.15□□□□□ -1.59
HMGB3P8-201ENST00000449709 SLC10A3P09131 477 aa5.15□□□□□ -1.59
HMGB3P8-201ENST00000449709 USP17L8P0C7I0 530 aa5.15□□□□□ -1.59
HMGB3P8-201ENST00000449709 PRPF38BQ5VTL8 546 aaKnown RBP5.15□□□□□ -1.59
HMGB3P8-201ENST00000449709 GJD4Q96KN9 370 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P8-201ENST00000449709 PRR14Q9BWN1 585 aa5.15□□□□□ -1.59
HMGB3P8-201ENST00000449709 GGCXP38435 758 aa5.14□□□□□ -1.59
HMGB3P8-201ENST00000449709 PDE4CQ08493 712 aa5.14□□□□□ -1.59
HMGB3P8-201ENST00000449709 RGS22Q8NE09 1264 aa5.14□□□□□ -1.59
HMGB3P8-201ENST00000449709 CABLES1Q8TDN4 633 aa5.14□□□□□ -1.59
HMGB3P8-201ENST00000449709 ADAMTS19Q8TE59 1207 aa5.14□□□□□ -1.59
HMGB3P8-201ENST00000449709 GZF1Q9H116 711 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P8-201ENST00000449709 NUTM2BA6NNL0 878 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 NUTM2EB1AL46 878 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 RNF223E7ERA6 249 aa5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 NRG2O14511 850 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 ACTN4O43707 911 aaKnown RBP5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 KDM4AO75164 1064 aa5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 SRPK2P78362 688 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms