RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MYSM1Q5VVJ2 828 aa6.19□□□□□ -1.42
PMS1-216ENST00000447734 NKX2-3Q8TAU0 364 aa6.19□□□□□ -1.42
PMS1-216ENST00000447734 APLP1P51693 650 aa6.18□□□□□ -1.42
PMS1-216ENST00000447734 KCNA1Q09470 495 aa6.18□□□□□ -1.42
PMS1-216ENST00000447734 PACS2Q86VP3 889 aa6.18□□□□□ -1.42
PMS1-216ENST00000447734 ZNF775Q96BV0 537 aaPredicted RBP6.18□□□□□ -1.42
PMS1-216ENST00000447734 CDCA7LQ96GN5 454 aa6.18□□□□□ -1.42
PMS1-216ENST00000447734 IL21Q9HBE4 155 aa6.18□□□□□ -1.42
PMS1-216ENST00000447734 MAP3K7O43318 606 aa6.17□□□□□ -1.42
PMS1-216ENST00000447734 TMEM259Q4ZIN3 620 aa6.17□□□□□ -1.42
PMS1-216ENST00000447734 ZNF787Q6DD87 383 aa6.17□□□□□ -1.42
PMS1-216ENST00000447734 GDPD2Q9HCC8 539 aa6.17□□□□□ -1.42
PMS1-216ENST00000447734 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.17□□□□□ -1.42
PMS1-216ENST00000447734 FAM217BQ9NTX9 383 aaPredicted RBP6.17□□□□□ -1.42
PMS1-216ENST00000447734 BRD1O95696 1058 aa6.16□□□□□ -1.42
PMS1-216ENST00000447734 PRSS12P56730 875 aa6.16□□□□□ -1.42
PMS1-216ENST00000447734 TRIM67Q6ZTA4 783 aa6.16□□□□□ -1.42
PMS1-216ENST00000447734 GLMNQ92990 594 aa6.16□□□□□ -1.42
PMS1-216ENST00000447734 EMID1Q96A84 441 aaPredicted RBP6.16□□□□□ -1.42
PMS1-216ENST00000447734 PHOX2BQ99453 314 aa6.16□□□□□ -1.42
PMS1-216ENST00000447734 CDHR5Q9HBB8 845 aa6.16□□□□□ -1.42
PMS1-216ENST00000447734 PRM3Q9NNZ6 103 aa6.16□□□□□ -1.42
PMS1-216ENST00000447734 ABL2P42684 1182 aa6.15□□□□□ -1.42
PMS1-216ENST00000447734 TATDN2Q93075 761 aa6.15□□□□□ -1.42
PMS1-216ENST00000447734 PBXIP1Q96AQ6 731 aa6.15□□□□□ -1.42
PMS1-216ENST00000447734 PDZRN3Q9UPQ7 1066 aa6.15□□□□□ -1.42
PMS1-216ENST00000447734 DIXDC1Q155Q3 683 aa6.14□□□□□ -1.43
PMS1-216ENST00000447734 PNMA3Q9UL41 463 aa6.14□□□□□ -1.43
PMS1-216ENST00000447734 USTQ9Y2C2 406 aa6.14□□□□□ -1.43
PMS1-216ENST00000447734 POM121CA8CG34 1229 aa6.13□□□□□ -1.43
PMS1-216ENST00000447734 CSB-PGBD3P0DP91 1061 aa6.13□□□□□ -1.43
PMS1-216ENST00000447734 MTMR14Q8NCE2 650 aa6.13□□□□□ -1.43
PMS1-216ENST00000447734 TBC1D2Q9BYX2 928 aa6.13□□□□□ -1.43
PMS1-216ENST00000447734 NPDC1Q9NQX5 325 aaPredicted RBP6.13□□□□□ -1.43
PMS1-216ENST00000447734 CCDC27Q2M243 656 aa6.12□□□□□ -1.43
PMS1-216ENST00000447734 PPP2R2DQ66LE6 453 aa6.12□□□□□ -1.43
PMS1-216ENST00000447734 AMOTL2Q9Y2J4 779 aa6.12□□□□□ -1.43
PMS1-216ENST00000447734 POTECB2RU33 542 aa6.11□□□□□ -1.43
PMS1-216ENST00000447734 RNF40O75150 1001 aa6.11□□□□□ -1.43
PMS1-216ENST00000447734 NUDT18Q6ZVK8 323 aa6.11□□□□□ -1.43
PMS1-216ENST00000447734 METTL3Q86U44 580 aaKnown RBP6.11□□□□□ -1.43
PMS1-216ENST00000447734 NLRP7Q8WX94 980 aa6.11□□□□□ -1.43
PMS1-216ENST00000447734 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.1□□□□□ -1.43
PMS1-216ENST00000447734 NBPF26B4DH59 902 aa6.1□□□□□ -1.43
PMS1-216ENST00000447734 SOCS7O14512 581 aa6.1□□□□□ -1.43
PMS1-216ENST00000447734 OATP04181 439 aa6.1□□□□□ -1.43
PMS1-216ENST00000447734 RFX1P22670 979 aa6.1□□□□□ -1.43
PMS1-216ENST00000447734 COPS2P61201 443 aa6.1□□□□□ -1.43
PMS1-216ENST00000447734 FBXO31Q5XUX0 539 aaPredicted RBP6.1□□□□□ -1.43
PMS1-216ENST00000447734 TTC13Q8NBP0 860 aa6.1□□□□□ -1.43
PMS1-216ENST00000447734 LIMD1Q9UGP4 676 aa6.1□□□□□ -1.43
PMS1-216ENST00000447734 TBC1D2BQ9UPU7 963 aa6.1□□□□□ -1.43
PMS1-216ENST00000447734 FAM161AQ3B820 660 aa6.09□□□□□ -1.43
PMS1-216ENST00000447734 LCE2AQ5TA79 106 aaPredicted RBP6.09□□□□□ -1.43
PMS1-216ENST00000447734 RIC3Q7Z5B4 369 aa6.09□□□□□ -1.43
PMS1-216ENST00000447734 IVNS1ABPQ9Y6Y0 642 aa6.09□□□□□ -1.43
PMS1-216ENST00000447734 HMGB1P09429 215 aaKnown RBP6.08□□□□□ -1.44
PMS1-216ENST00000447734 MYT1Q01538 1121 aa6.08□□□□□ -1.44
PMS1-216ENST00000447734 SWT1Q5T5J6 900 aaKnown RBP6.08□□□□□ -1.44
PMS1-216ENST00000447734 SND1Q7KZF4 910 aaKnown RBP eCLIP6.08□□□□□ -1.44
PMS1-216ENST00000447734 CERKQ8TCT0 537 aa6.08□□□□□ -1.44
PMS1-216ENST00000447734 ZPR1O75312 459 aa6.07□□□□□ -1.44
PMS1-216ENST00000447734 HDGFL1Q5TGJ6 251 aa6.07□□□□□ -1.44
PMS1-216ENST00000447734 PXYLP1Q8TE99 480 aa6.07□□□□□ -1.44
PMS1-216ENST00000447734 USP35Q9P2H5 1018 aa6.07□□□□□ -1.44
PMS1-216ENST00000447734 RBM27Q9P2N5 1060 aaKnown RBP6.07□□□□□ -1.44
PMS1-216ENST00000447734 RNF223E7ERA6 249 aa6.06□□□□□ -1.44
PMS1-216ENST00000447734 AP1G2O75843 785 aa6.06□□□□□ -1.44
PMS1-216ENST00000447734 TUSC1Q2TAM9 212 aa6.06□□□□□ -1.44
PMS1-216ENST00000447734 CFAP70Q5T0N1 1121 aa6.06□□□□□ -1.44
PMS1-216ENST00000447734 PADI6Q6TGC4 694 aa6.06□□□□□ -1.44
PMS1-216ENST00000447734 CARNS1A5YM72 827 aa6.05□□□□□ -1.44
PMS1-216ENST00000447734 CSPP1Q1MSJ5 1256 aa6.05□□□□□ -1.44
PMS1-216ENST00000447734 ADGRG1Q9Y653 693 aa6.05□□□□□ -1.44
PMS1-216ENST00000447734 SPTLC1O15269 473 aa6.04□□□□□ -1.44
PMS1-216ENST00000447734 TLL1O43897 1013 aa6.04□□□□□ -1.44
PMS1-216ENST00000447734 USP17L8P0C7I0 530 aa6.04□□□□□ -1.44
PMS1-216ENST00000447734 SLC19A1P41440 591 aa6.04□□□□□ -1.44
PMS1-216ENST00000447734 WASHC4Q2M389 1173 aa6.04□□□□□ -1.44
PMS1-216ENST00000447734 SPRYD7Q5W111 196 aa6.04□□□□□ -1.44
PMS1-216ENST00000447734 ADAMTS19Q8TE59 1207 aa6.04□□□□□ -1.44
PMS1-216ENST00000447734 SPIRE2Q8WWL2 714 aa6.04□□□□□ -1.44
PMS1-216ENST00000447734 NDUFB9Q9Y6M9 179 aa6.04□□□□□ -1.44
PMS1-216ENST00000447734 PPEF1O14829 653 aaPredicted RBP6.03□□□□□ -1.44
PMS1-216ENST00000447734 GGCXP38435 758 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 SRPK2P78362 688 aaKnown RBP6.03□□□□□ -1.44
PMS1-216ENST00000447734 PRR20EP86478 221 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 PRR20CP86479 221 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 PRR20DP86480 221 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 PRR20BP86481 221 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 PRR20AP86496 221 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 RSBN1LQ6PCB5 846 aaPredicted RBP6.03□□□□□ -1.44
PMS1-216ENST00000447734 BLOC1S3Q6QNY0 202 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 LIAT1Q6ZQX7 453 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 EYA1Q99502 592 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 PPP1R12CQ9BZL4 782 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 VRTNQ9H8Y1 702 aa6.03□□□□□ -1.44
PMS1-216ENST00000447734 GDF9O60383 454 aa6.02□□□□□ -1.45
PMS1-216ENST00000447734 DGAT1O75907 488 aa6.02□□□□□ -1.45
PMS1-216ENST00000447734 HSP90B1P14625 803 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms