RNA–Protein interactions for RNA: ENST00000446404.1

AP000402.1-201, humanhuman

TSL 3 BASIC

Gene AP000402.1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000402.1-201ENST00000446404 MTMR2Q13614 643 aa12.76□□□□□ -0.37
AP000402.1-201ENST00000446404 THSD4Q6ZMP0 1018 aa12.75□□□□□ -0.37
AP000402.1-201ENST00000446404 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
AP000402.1-201ENST00000446404 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
AP000402.1-201ENST00000446404 C6orf229H3BNL8 230 aa12.72□□□□□ -0.37
AP000402.1-201ENST00000446404 UBTFP17480 764 aaKnown RBP12.72□□□□□ -0.37
AP000402.1-201ENST00000446404 KCTD12Q96CX2 325 aaKnown RBP12.72□□□□□ -0.37
AP000402.1-201ENST00000446404 SLC27A5Q9Y2P5 690 aa12.72□□□□□ -0.37
AP000402.1-201ENST00000446404 AP1G2O75843 785 aa12.71□□□□□ -0.37
AP000402.1-201ENST00000446404 Q3C1V9 767 aa12.71□□□□□ -0.37
AP000402.1-201ENST00000446404 SNRKQ9NRH2 765 aa12.71□□□□□ -0.37
AP000402.1-201ENST00000446404 PCDHB3Q9Y5E6 796 aa12.7□□□□□ -0.38
AP000402.1-201ENST00000446404 SOCS7O14512 581 aa12.68□□□□□ -0.38
AP000402.1-201ENST00000446404 SYMPKQ92797 1274 aaKnown RBP12.68□□□□□ -0.38
AP000402.1-201ENST00000446404 A6NJR5 290 aa12.67□□□□□ -0.38
AP000402.1-201ENST00000446404 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
AP000402.1-201ENST00000446404 USP17L8P0C7I0 530 aa12.67□□□□□ -0.38
AP000402.1-201ENST00000446404 RETREG3Q86VR2 466 aa12.67□□□□□ -0.38
AP000402.1-201ENST00000446404 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
AP000402.1-201ENST00000446404 SALL2Q9Y467 1007 aaPredicted RBP12.67□□□□□ -0.38
AP000402.1-201ENST00000446404 NR1I2O75469 434 aa12.66□□□□□ -0.38
AP000402.1-201ENST00000446404 NYAP1Q6ZVC0 841 aa12.66□□□□□ -0.38
AP000402.1-201ENST00000446404 HELBQ8NG08 1087 aaPredicted RBP12.66□□□□□ -0.38
AP000402.1-201ENST00000446404 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
AP000402.1-201ENST00000446404 BLOC1S3Q6QNY0 202 aa12.65□□□□□ -0.38
AP000402.1-201ENST00000446404 CLUAP1Q96AJ1 413 aa12.65□□□□□ -0.38
AP000402.1-201ENST00000446404 RNF19BQ6ZMZ0 732 aa12.64□□□□□ -0.39
AP000402.1-201ENST00000446404 SCUBE3Q8IX30 993 aa12.64□□□□□ -0.39
AP000402.1-201ENST00000446404 PRR7Q8TB68 274 aa12.64□□□□□ -0.39
AP000402.1-201ENST00000446404 APBB1O00213 710 aa12.63□□□□□ -0.39
AP000402.1-201ENST00000446404 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
AP000402.1-201ENST00000446404 CTDSPL2Q05D32 466 aa12.63□□□□□ -0.39
AP000402.1-201ENST00000446404 BRICD5Q6PL45 260 aa12.63□□□□□ -0.39
AP000402.1-201ENST00000446404 RAD21O60216 631 aa12.62□□□□□ -0.39
AP000402.1-201ENST00000446404 TSC1Q92574 1164 aa12.62□□□□□ -0.39
AP000402.1-201ENST00000446404 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
AP000402.1-201ENST00000446404 POM121Q96HA1 1249 aa12.62□□□□□ -0.39
AP000402.1-201ENST00000446404 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
AP000402.1-201ENST00000446404 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
AP000402.1-201ENST00000446404 DESI1Q6ICB0 168 aa12.6□□□□□ -0.39
AP000402.1-201ENST00000446404 USB1Q9BQ65 265 aaKnown RBP12.6□□□□□ -0.39
AP000402.1-201ENST00000446404 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
AP000402.1-201ENST00000446404 PTPN5P54829 565 aa12.59□□□□□ -0.39
AP000402.1-201ENST00000446404 COPS2P61201 443 aa12.58□□□□□ -0.4
AP000402.1-201ENST00000446404 GJD4Q96KN9 370 aaPredicted RBP12.58□□□□□ -0.4
AP000402.1-201ENST00000446404 PROSER2Q86WR7 435 aaPredicted RBP12.57□□□□□ -0.4
AP000402.1-201ENST00000446404 LRRN4Q8WUT4 740 aa12.57□□□□□ -0.4
AP000402.1-201ENST00000446404 HMX1Q9NP08 348 aaPredicted RBP12.57□□□□□ -0.4
AP000402.1-201ENST00000446404 TRAK2O60296 914 aa12.56□□□□□ -0.4
AP000402.1-201ENST00000446404 PRM3Q9NNZ6 103 aa12.56□□□□□ -0.4
AP000402.1-201ENST00000446404 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
AP000402.1-201ENST00000446404 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
AP000402.1-201ENST00000446404 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
AP000402.1-201ENST00000446404 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
AP000402.1-201ENST00000446404 MTRQ99707 1265 aa12.54□□□□□ -0.4
AP000402.1-201ENST00000446404 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
AP000402.1-201ENST00000446404 LYPD8Q6UX82 237 aa12.53□□□□□ -0.4
AP000402.1-201ENST00000446404 SPSB2Q99619 263 aa12.53□□□□□ -0.4
AP000402.1-201ENST00000446404 TRIM34Q9BYJ4 488 aa12.53□□□□□ -0.4
AP000402.1-201ENST00000446404 TBC1D2BQ9UPU7 963 aa12.53□□□□□ -0.4
AP000402.1-201ENST00000446404 NDUFB9Q9Y6M9 179 aa12.53□□□□□ -0.4
AP000402.1-201ENST00000446404 ZPR1O75312 459 aa12.52□□□□□ -0.41
AP000402.1-201ENST00000446404 JUNDP17535 347 aa12.51□□□□□ -0.41
AP000402.1-201ENST00000446404 TJAP1Q5JTD0 557 aa12.5□□□□□ -0.41
AP000402.1-201ENST00000446404 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
AP000402.1-201ENST00000446404 IL21Q9HBE4 155 aa12.5□□□□□ -0.41
AP000402.1-201ENST00000446404 TLL1O43897 1013 aa12.49□□□□□ -0.41
AP000402.1-201ENST00000446404 ADH1BP00325 375 aa12.49□□□□□ -0.41
AP000402.1-201ENST00000446404 ABL2P42684 1182 aa12.49□□□□□ -0.41
AP000402.1-201ENST00000446404 PTPRNQ16849 979 aa12.47□□□□□ -0.41
AP000402.1-201ENST00000446404 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
AP000402.1-201ENST00000446404 EPS8L1Q8TE68 723 aa12.47□□□□□ -0.41
AP000402.1-201ENST00000446404 GPR37L1O60883 481 aa12.46□□□□□ -0.41
AP000402.1-201ENST00000446404 DXOO77932 396 aaKnown RBP12.46□□□□□ -0.41
AP000402.1-201ENST00000446404 MMP16P51512 607 aa12.46□□□□□ -0.41
AP000402.1-201ENST00000446404 NR6A1Q15406 480 aa12.46□□□□□ -0.41
AP000402.1-201ENST00000446404 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.41
AP000402.1-201ENST00000446404 RNF166Q96A37 237 aaPredicted RBP12.46□□□□□ -0.41
AP000402.1-201ENST00000446404 C1orf115Q9H7X2 142 aa12.46□□□□□ -0.41
AP000402.1-201ENST00000446404 ARID3CA6NKF2 412 aa12.45□□□□□ -0.42
AP000402.1-201ENST00000446404 ZNF516Q92618 1163 aa12.45□□□□□ -0.42
AP000402.1-201ENST00000446404 PRDM9Q9NQV7 894 aa12.45□□□□□ -0.42
AP000402.1-201ENST00000446404 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
AP000402.1-201ENST00000446404 F12P00748 615 aaPredicted RBP12.44□□□□□ -0.42
AP000402.1-201ENST00000446404 IRF5Q13568 498 aa12.43□□□□□ -0.42
AP000402.1-201ENST00000446404 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
AP000402.1-201ENST00000446404 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
AP000402.1-201ENST00000446404 CCNYL3P0C7X3 344 aa12.41□□□□□ -0.42
AP000402.1-201ENST00000446404 PNMA1Q8ND90 353 aa12.4□□□□□ -0.42
AP000402.1-201ENST00000446404 NUDT12Q9BQG2 462 aa12.4□□□□□ -0.42
AP000402.1-201ENST00000446404 SLC6A16Q9GZN6 736 aa12.4□□□□□ -0.42
AP000402.1-201ENST00000446404 MAP10Q9P2G4 905 aa12.4□□□□□ -0.42
AP000402.1-201ENST00000446404 WASHC4Q2M389 1173 aa12.38□□□□□ -0.43
AP000402.1-201ENST00000446404 EVA1BQ9NVM1 165 aa12.38□□□□□ -0.43
AP000402.1-201ENST00000446404 CTHP32929 405 aa12.37□□□□□ -0.43
AP000402.1-201ENST00000446404 NKX2-3Q8TAU0 364 aa12.37□□□□□ -0.43
AP000402.1-201ENST00000446404 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
AP000402.1-201ENST00000446404 KCNH2Q12809 1159 aa12.36□□□□□ -0.43
AP000402.1-201ENST00000446404 FKBPLQ9UIM3 349 aa12.35□□□□□ -0.43
AP000402.1-201ENST00000446404 POM121CA8CG34 1229 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms