RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 SPTLC1O15269 473 aa13.25□□□□□ -0.29
ATP13A3-204ENST00000446356 PPP1R18Q6NYC8 613 aa13.25□□□□□ -0.29
ATP13A3-204ENST00000446356 USB1Q9BQ65 265 aaKnown RBP13.25□□□□□ -0.29
ATP13A3-204ENST00000446356 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.25□□□□□ -0.29
ATP13A3-204ENST00000446356 ATP1B4Q9UN42 357 aaPredicted RBP13.25□□□□□ -0.29
ATP13A3-204ENST00000446356 S1PR4O95977 384 aa13.24□□□□□ -0.29
ATP13A3-204ENST00000446356 CLK2P49760 499 aaKnown RBP13.23□□□□□ -0.29
ATP13A3-204ENST00000446356 PCDHGC3Q9UN70 934 aa13.23□□□□□ -0.29
ATP13A3-204ENST00000446356 MTMR2Q13614 643 aa13.22□□□□□ -0.29
ATP13A3-204ENST00000446356 MSS51Q4VC12 460 aa13.22□□□□□ -0.29
ATP13A3-204ENST00000446356 SH3D19Q5HYK7 790 aa13.22□□□□□ -0.29
ATP13A3-204ENST00000446356 RETREG3Q86VR2 466 aa13.22□□□□□ -0.29
ATP13A3-204ENST00000446356 IL27Q8NEV9 243 aa13.22□□□□□ -0.29
ATP13A3-204ENST00000446356 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.29
ATP13A3-204ENST00000446356 SPDYE5A6NIY4 337 aa13.21□□□□□ -0.29
ATP13A3-204ENST00000446356 CSPP1Q1MSJ5 1256 aa13.21□□□□□ -0.29
ATP13A3-204ENST00000446356 ZBTB3Q9H5J0 574 aa13.21□□□□□ -0.29
ATP13A3-204ENST00000446356 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
ATP13A3-204ENST00000446356 SKIV2LQ15477 1246 aaKnown RBP13.19□□□□□ -0.3
ATP13A3-204ENST00000446356 PRPF38BQ5VTL8 546 aaKnown RBP13.19□□□□□ -0.3
ATP13A3-204ENST00000446356 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
ATP13A3-204ENST00000446356 SYMPKQ92797 1274 aaKnown RBP13.19□□□□□ -0.3
ATP13A3-204ENST00000446356 LIMD1Q9UGP4 676 aa13.19□□□□□ -0.3
ATP13A3-204ENST00000446356 TUSC1Q2TAM9 212 aa13.18□□□□□ -0.3
ATP13A3-204ENST00000446356 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
ATP13A3-204ENST00000446356 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
ATP13A3-204ENST00000446356 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
ATP13A3-204ENST00000446356 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
ATP13A3-204ENST00000446356 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
ATP13A3-204ENST00000446356 PRDM9Q9NQV7 894 aa13.17□□□□□ -0.3
ATP13A3-204ENST00000446356 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
ATP13A3-204ENST00000446356 ANKLE1Q8NAG6 615 aa13.16□□□□□ -0.3
ATP13A3-204ENST00000446356 RGS20O76081 388 aa13.15□□□□□ -0.3
ATP13A3-204ENST00000446356 HRCP23327 699 aa13.14□□□□□ -0.31
ATP13A3-204ENST00000446356 PRR7Q8TB68 274 aa13.13□□□□□ -0.31
ATP13A3-204ENST00000446356 PCMTD1Q96MG8 357 aaPredicted RBP13.13□□□□□ -0.31
ATP13A3-204ENST00000446356 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
ATP13A3-204ENST00000446356 PPEF1O14829 653 aaPredicted RBP13.12□□□□□ -0.31
ATP13A3-204ENST00000446356 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
ATP13A3-204ENST00000446356 JUNDP17535 347 aa13.12□□□□□ -0.31
ATP13A3-204ENST00000446356 MMP16P51512 607 aa13.12□□□□□ -0.31
ATP13A3-204ENST00000446356 CABLES1Q8TDN4 633 aa13.12□□□□□ -0.31
ATP13A3-204ENST00000446356 FCF1Q9Y324 198 aaKnown RBP13.12□□□□□ -0.31
ATP13A3-204ENST00000446356 QPCTQ16769 361 aa13.1□□□□□ -0.31
ATP13A3-204ENST00000446356 LILRB3O75022 631 aa13.09□□□□□ -0.31
ATP13A3-204ENST00000446356 TSC1Q92574 1164 aa13.09□□□□□ -0.31
ATP13A3-204ENST00000446356 DESI1Q6ICB0 168 aa13.08□□□□□ -0.32
ATP13A3-204ENST00000446356 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
ATP13A3-204ENST00000446356 HELBQ8NG08 1087 aaPredicted RBP13.07□□□□□ -0.32
ATP13A3-204ENST00000446356 PRKD2Q9BZL6 878 aa13.07□□□□□ -0.32
ATP13A3-204ENST00000446356 CCDC24Q8N4L8 307 aa13.06□□□□□ -0.32
ATP13A3-204ENST00000446356 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATP13A3-204ENST00000446356 CFAP99D6REC4 459 aa13.05□□□□□ -0.32
ATP13A3-204ENST00000446356 NUDT12Q9BQG2 462 aa13.05□□□□□ -0.32
ATP13A3-204ENST00000446356 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
ATP13A3-204ENST00000446356 ZBTB24O43167 697 aaPredicted RBP13.04□□□□□ -0.32
ATP13A3-204ENST00000446356 PTPRNQ16849 979 aa13.04□□□□□ -0.32
ATP13A3-204ENST00000446356 SLC19A1P41440 591 aa13.03□□□□□ -0.32
ATP13A3-204ENST00000446356 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
ATP13A3-204ENST00000446356 CCNYL3P0C7X3 344 aa13.02□□□□□ -0.33
ATP13A3-204ENST00000446356 PPP2R2DQ66LE6 453 aa13□□□□□ -0.33
ATP13A3-204ENST00000446356 PLA2G2CQ5R387 149 aa12.99□□□□□ -0.33
ATP13A3-204ENST00000446356 RPIAP49247 311 aa12.98□□□□□ -0.33
ATP13A3-204ENST00000446356 LYPD8Q6UX82 237 aa12.98□□□□□ -0.33
ATP13A3-204ENST00000446356 CD2BP2O95400 341 aaKnown RBP12.96□□□□□ -0.33
ATP13A3-204ENST00000446356 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
ATP13A3-204ENST00000446356 CTHP32929 405 aa12.95□□□□□ -0.34
ATP13A3-204ENST00000446356 RFC5P40937 340 aa12.95□□□□□ -0.34
ATP13A3-204ENST00000446356 AP1G2O75843 785 aa12.94□□□□□ -0.34
ATP13A3-204ENST00000446356 SPRYD7Q5W111 196 aa12.94□□□□□ -0.34
ATP13A3-204ENST00000446356 EVA1BQ9NVM1 165 aa12.94□□□□□ -0.34
ATP13A3-204ENST00000446356 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
ATP13A3-204ENST00000446356 KCNH2Q12809 1159 aa12.92□□□□□ -0.34
ATP13A3-204ENST00000446356 TRIM32Q13049 653 aa12.92□□□□□ -0.34
ATP13A3-204ENST00000446356 ZNF697Q5TEC3 545 aa12.92□□□□□ -0.34
ATP13A3-204ENST00000446356 ZNF598Q86UK7 904 aaKnown RBP12.92□□□□□ -0.34
ATP13A3-204ENST00000446356 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
ATP13A3-204ENST00000446356 IRX2Q9BZI1 471 aaPredicted RBP12.92□□□□□ -0.34
ATP13A3-204ENST00000446356 TMEM259Q4ZIN3 620 aa12.91□□□□□ -0.34
ATP13A3-204ENST00000446356 CTDSPL2Q05D32 466 aa12.9□□□□□ -0.34
ATP13A3-204ENST00000446356 FBXO31Q5XUX0 539 aaPredicted RBP12.9□□□□□ -0.34
ATP13A3-204ENST00000446356 UNC93B1Q9H1C4 597 aa12.89□□□□□ -0.35
ATP13A3-204ENST00000446356 MAP10Q9P2G4 905 aa12.88□□□□□ -0.35
ATP13A3-204ENST00000446356 F12P00748 615 aaPredicted RBP12.87□□□□□ -0.35
ATP13A3-204ENST00000446356 USP17L8P0C7I0 530 aa12.87□□□□□ -0.35
ATP13A3-204ENST00000446356 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
ATP13A3-204ENST00000446356 PTCRAQ6ISU1 281 aaPredicted RBP12.87□□□□□ -0.35
ATP13A3-204ENST00000446356 WNT7BP56706 349 aa12.84□□□□□ -0.35
ATP13A3-204ENST00000446356 ARMC2Q8NEN0 867 aa12.84□□□□□ -0.35
ATP13A3-204ENST00000446356 LRRN4Q8WUT4 740 aa12.84□□□□□ -0.35
ATP13A3-204ENST00000446356 FOXC1Q12948 553 aa12.82□□□□□ -0.36
ATP13A3-204ENST00000446356 PNMA1Q8ND90 353 aa12.82□□□□□ -0.36
ATP13A3-204ENST00000446356 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
ATP13A3-204ENST00000446356 LINC01559Q495D7 138 aa12.81□□□□□ -0.36
ATP13A3-204ENST00000446356 LAPTM4AQ15012 233 aa12.8□□□□□ -0.36
ATP13A3-204ENST00000446356 NBPF14Q5TI25 921 aa12.8□□□□□ -0.36
ATP13A3-204ENST00000446356 BANK1Q8NDB2 785 aa12.8□□□□□ -0.36
ATP13A3-204ENST00000446356 BAP1Q92560 729 aa12.8□□□□□ -0.36
ATP13A3-204ENST00000446356 APBB1O00213 710 aa12.79□□□□□ -0.36
ATP13A3-204ENST00000446356 WNT7AO00755 349 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms