RNA–Protein interactions for RNA: ENST00000445241.5

PTPA-222, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-222ENST00000445241 MST1RQ04912 1400 aa20.98■□□□□ 0.95
PTPA-222ENST00000445241 ADGRB2O60241 1585 aa20.97■□□□□ 0.95
PTPA-222ENST00000445241 WAPLQ7Z5K2 1190 aa20.96■□□□□ 0.95
PTPA-222ENST00000445241 PLEKHH1Q9ULM0 1364 aa20.96■□□□□ 0.95
PTPA-222ENST00000445241 PRAM1Q96QH2 718 aa20.95■□□□□ 0.94
PTPA-222ENST00000445241 GPRASP1Q5JY77 1395 aa20.95■□□□□ 0.94
PTPA-222ENST00000445241 POGKQ9P215 609 aa20.94■□□□□ 0.94
PTPA-222ENST00000445241 TRAK1Q9UPV9 953 aa20.94■□□□□ 0.94
PTPA-222ENST00000445241 FMN2Q9NZ56 1722 aa20.94■□□□□ 0.94
PTPA-222ENST00000445241 NBPF1Q3BBV0 1214 aa20.93■□□□□ 0.94
PTPA-222ENST00000445241 CCER1Q8TC90 406 aaPredicted RBP20.93■□□□□ 0.94
PTPA-222ENST00000445241 ROCK2O75116 1388 aaKnown RBP20.92■□□□□ 0.94
PTPA-222ENST00000445241 C1orf167Q5SNV9 1468 aa20.92■□□□□ 0.94
PTPA-222ENST00000445241 RALGAPBQ86X10 1494 aa20.92■□□□□ 0.94
PTPA-222ENST00000445241 AHDC1Q5TGY3 1603 aaPredicted RBP20.92■□□□□ 0.94
PTPA-222ENST00000445241 HSPA1LP34931 641 aa20.9■□□□□ 0.94
PTPA-222ENST00000445241 EIF3AQ14152 1382 aaKnown RBP20.89■□□□□ 0.93
PTPA-222ENST00000445241 NBPF8Q3BBV2 869 aa20.89■□□□□ 0.93
PTPA-222ENST00000445241 PHLPP1O60346 1717 aa20.88■□□□□ 0.93
PTPA-222ENST00000445241 BRINP3Q76B58 766 aa20.88■□□□□ 0.93
PTPA-222ENST00000445241 NHSL1Q5SYE7 1610 aa20.88■□□□□ 0.93
PTPA-222ENST00000445241 ANKARQ7Z5J8 1434 aa20.87■□□□□ 0.93
PTPA-222ENST00000445241 KIF1AQ12756 1690 aa20.85■□□□□ 0.93
PTPA-222ENST00000445241 SAFB2Q14151 953 aaKnown RBP eCLIP20.84■□□□□ 0.93
PTPA-222ENST00000445241 COL16A1Q07092 1604 aaPredicted RBP20.84■□□□□ 0.93
PTPA-222ENST00000445241 QRICH2Q9H0J4 1663 aa20.83■□□□□ 0.93
PTPA-222ENST00000445241 CENPJQ9HC77 1338 aaPredicted RBP20.83■□□□□ 0.93
PTPA-222ENST00000445241 TULP4Q9NRJ4 1543 aa20.83■□□□□ 0.92
PTPA-222ENST00000445241 WASLO00401 505 aaPredicted RBP20.81■□□□□ 0.92
PTPA-222ENST00000445241 RGPD8O14715 1765 aaPredicted RBP20.81■□□□□ 0.92
PTPA-222ENST00000445241 MINK1Q8N4C8 1332 aaPredicted RBP20.8■□□□□ 0.92
PTPA-222ENST00000445241 CARD11Q9BXL7 1154 aa20.8■□□□□ 0.92
PTPA-222ENST00000445241 ITSN1Q15811 1721 aa20.8■□□□□ 0.92
PTPA-222ENST00000445241 USP32Q8NFA0 1604 aa20.79■□□□□ 0.92
PTPA-222ENST00000445241 SBNO2Q9Y2G9 1366 aa20.79■□□□□ 0.92
PTPA-222ENST00000445241 ESCO1Q5FWF5 840 aa20.78■□□□□ 0.92
PTPA-222ENST00000445241 ORAI2Q96SN7 254 aa20.77■□□□□ 0.92
PTPA-222ENST00000445241 NPHP3Q7Z494 1330 aa20.77■□□□□ 0.91
PTPA-222ENST00000445241 SHPRHQ149N8 1683 aa20.77■□□□□ 0.91
PTPA-222ENST00000445241 JCADQ9P266 1359 aa20.76■□□□□ 0.91
PTPA-222ENST00000445241 HIRIP3Q9BW71 556 aaPredicted RBP20.76■□□□□ 0.91
PTPA-222ENST00000445241 SOS2Q07890 1332 aaPredicted RBP20.75■□□□□ 0.91
PTPA-222ENST00000445241 ATP7BP35670 1465 aa20.74■□□□□ 0.91
PTPA-222ENST00000445241 TOPAZ1Q8N9V7 1692 aa20.73■□□□□ 0.91
PTPA-222ENST00000445241 SLC24A1O60721 1099 aa20.73■□□□□ 0.91
PTPA-222ENST00000445241 LRRC59Q96AG4 307 aaKnown RBP20.73■□□□□ 0.91
PTPA-222ENST00000445241 PHF8Q9UPP1 1060 aa20.73■□□□□ 0.91
PTPA-222ENST00000445241 PXDNQ92626 1479 aa20.71■□□□□ 0.91
PTPA-222ENST00000445241 NUTM2FA1L443 756 aa20.71■□□□□ 0.91
PTPA-222ENST00000445241 CDK19Q9BWU1 502 aa20.71■□□□□ 0.91
PTPA-222ENST00000445241 EVC2Q86UK5 1308 aa20.71■□□□□ 0.91
PTPA-222ENST00000445241 PRR36Q9H6K5 1346 aa20.7■□□□□ 0.9
PTPA-222ENST00000445241 NUDT16Q96DE0 195 aaKnown RBP20.69■□□□□ 0.9
PTPA-222ENST00000445241 SPATA31A6Q5VVP1 1343 aa20.69■□□□□ 0.9
PTPA-222ENST00000445241 FOXO3O43524 673 aa20.68■□□□□ 0.9
PTPA-222ENST00000445241 CCDC61Q9Y6R9 512 aa20.68■□□□□ 0.9
PTPA-222ENST00000445241 MED1Q15648 1581 aaPredicted RBP20.68■□□□□ 0.9
PTPA-222ENST00000445241 COL22A1Q8NFW1 1626 aaPredicted RBP20.66■□□□□ 0.9
PTPA-222ENST00000445241 SBNO1A3KN83 1393 aa20.65■□□□□ 0.9
PTPA-222ENST00000445241 USP47Q96K76 1375 aa20.65■□□□□ 0.9
PTPA-222ENST00000445241 SRPK2P78362 688 aaKnown RBP20.65■□□□□ 0.9
PTPA-222ENST00000445241 PSME1Q06323 249 aa20.65■□□□□ 0.9
PTPA-222ENST00000445241 DDX17Q92841 729 aaKnown RBP20.65■□□□□ 0.9
PTPA-222ENST00000445241 PUS7Q96PZ0 661 aaKnown RBP20.65■□□□□ 0.9
PTPA-222ENST00000445241 POLR3AO14802 1390 aaPredicted RBP20.64■□□□□ 0.89
PTPA-222ENST00000445241 ATAD2Q6PL18 1390 aa20.64■□□□□ 0.89
PTPA-222ENST00000445241 PNPLA6Q8IY17 1366 aa20.64■□□□□ 0.89
PTPA-222ENST00000445241 PLEKHG3A1L390 1219 aa20.64■□□□□ 0.89
PTPA-222ENST00000445241 TRPM3Q9HCF6 1732 aaPredicted RBP20.63■□□□□ 0.89
PTPA-222ENST00000445241 KRT28Q7Z3Y7 464 aa20.61■□□□□ 0.89
PTPA-222ENST00000445241 TNS3Q68CZ2 1445 aa20.61■□□□□ 0.89
PTPA-222ENST00000445241 PPIP5K1Q6PFW1 1433 aa20.61■□□□□ 0.89
PTPA-222ENST00000445241 BRD4O60885 1362 aaPredicted RBP20.6■□□□□ 0.89
PTPA-222ENST00000445241 SPATA31A3Q5VYP0 1347 aa20.6■□□□□ 0.89
PTPA-222ENST00000445241 ST20-MTHFSA0A0A6YYL1 179 aa20.6■□□□□ 0.89
PTPA-222ENST00000445241 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
PTPA-222ENST00000445241 PMFBP1Q8TBY8 1022 aa20.6■□□□□ 0.89
PTPA-222ENST00000445241 TESK2Q96S53 571 aa20.6■□□□□ 0.89
PTPA-222ENST00000445241 CABP2Q9NPB3 220 aa20.6■□□□□ 0.89
PTPA-222ENST00000445241 ARHGEF10O15013 1369 aa20.59■□□□□ 0.89
PTPA-222ENST00000445241 ALS2Q96Q42 1657 aa20.58■□□□□ 0.89
PTPA-222ENST00000445241 ACEP12821 1306 aa20.56■□□□□ 0.88
PTPA-222ENST00000445241 XPCQ01831 940 aaPredicted RBP20.56■□□□□ 0.88
PTPA-222ENST00000445241 NINLQ9Y2I6 1382 aa20.56■□□□□ 0.88
PTPA-222ENST00000445241 AKAP12Q02952 1782 aa20.55■□□□□ 0.88
PTPA-222ENST00000445241 LRP6O75581 1613 aa20.55■□□□□ 0.88
PTPA-222ENST00000445241 TMF1P82094 1093 aa20.53■□□□□ 0.88
PTPA-222ENST00000445241 CDCA8Q53HL2 280 aa20.53■□□□□ 0.88
PTPA-222ENST00000445241 ZNF692Q9BU19 519 aaPredicted RBP20.53■□□□□ 0.88
PTPA-222ENST00000445241 MARF1Q9Y4F3 1742 aaKnown RBP20.53■□□□□ 0.88
PTPA-222ENST00000445241 DISP3Q9P2K9 1392 aa20.52■□□□□ 0.88
PTPA-222ENST00000445241 EIF4G2P78344 907 aaKnown RBP eCLIP20.52■□□□□ 0.88
PTPA-222ENST00000445241 CABP1Q9NZU7 370 aa20.52■□□□□ 0.88
PTPA-222ENST00000445241 USP6P35125 1406 aa20.51■□□□□ 0.87
PTPA-222ENST00000445241 ABCA3Q99758 1704 aa20.5■□□□□ 0.87
PTPA-222ENST00000445241 CPSF1Q10570 1443 aaKnown RBP20.5■□□□□ 0.87
PTPA-222ENST00000445241 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
PTPA-222ENST00000445241 MON2Q7Z3U7 1717 aa20.49■□□□□ 0.87
PTPA-222ENST00000445241 CRYBG1Q9Y4K1 1723 aa20.47■□□□□ 0.87
PTPA-222ENST00000445241 SSH2Q76I76 1423 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms