RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 WAPLQ7Z5K2 1190 aa15.5■□□□□ 0.07
HDAC6-211ENST00000443563 POGKQ9P215 609 aa15.5■□□□□ 0.07
HDAC6-211ENST00000443563 TRAK1Q9UPV9 953 aa15.5■□□□□ 0.07
HDAC6-211ENST00000443563 ARHGEF28Q8N1W1 1705 aaKnown RBP15.5■□□□□ 0.07
HDAC6-211ENST00000443563 PRAM1Q96QH2 718 aa15.48■□□□□ 0.07
HDAC6-211ENST00000443563 MST1RQ04912 1400 aa15.47■□□□□ 0.07
HDAC6-211ENST00000443563 NBPF1Q3BBV0 1214 aa15.47■□□□□ 0.07
HDAC6-211ENST00000443563 ROCK2O75116 1388 aaKnown RBP15.47■□□□□ 0.07
HDAC6-211ENST00000443563 PLEKHH1Q9ULM0 1364 aa15.47■□□□□ 0.07
HDAC6-211ENST00000443563 ADGRB2O60241 1585 aa15.45■□□□□ 0.06
HDAC6-211ENST00000443563 FMN2Q9NZ56 1722 aa15.45■□□□□ 0.06
HDAC6-211ENST00000443563 NBPF8Q3BBV2 869 aa15.44■□□□□ 0.06
HDAC6-211ENST00000443563 RALGAPBQ86X10 1494 aa15.44■□□□□ 0.06
HDAC6-211ENST00000443563 SAFB2Q14151 953 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC6-211ENST00000443563 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
HDAC6-211ENST00000443563 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
HDAC6-211ENST00000443563 EIF3AQ14152 1382 aaKnown RBP15.42■□□□□ 0.06
HDAC6-211ENST00000443563 GPRASP1Q5JY77 1395 aa15.42■□□□□ 0.06
HDAC6-211ENST00000443563 HSPA1LP34931 641 aa15.42■□□□□ 0.06
HDAC6-211ENST00000443563 BRINP3Q76B58 766 aa15.41■□□□□ 0.06
HDAC6-211ENST00000443563 AHDC1Q5TGY3 1603 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-211ENST00000443563 QRICH2Q9H0J4 1663 aa15.41■□□□□ 0.06
HDAC6-211ENST00000443563 NHSL1Q5SYE7 1610 aa15.4■□□□□ 0.06
HDAC6-211ENST00000443563 MINK1Q8N4C8 1332 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-211ENST00000443563 CENPJQ9HC77 1338 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-211ENST00000443563 CARD11Q9BXL7 1154 aa15.39■□□□□ 0.05
HDAC6-211ENST00000443563 KIF1AQ12756 1690 aa15.38■□□□□ 0.05
HDAC6-211ENST00000443563 RGPD8O14715 1765 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-211ENST00000443563 ANKARQ7Z5J8 1434 aa15.37■□□□□ 0.05
HDAC6-211ENST00000443563 WASLO00401 505 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-211ENST00000443563 ESCO1Q5FWF5 840 aa15.37■□□□□ 0.05
HDAC6-211ENST00000443563 HIRIP3Q9BW71 556 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-211ENST00000443563 ITSN1Q15811 1721 aa15.37■□□□□ 0.05
HDAC6-211ENST00000443563 TULP4Q9NRJ4 1543 aa15.36■□□□□ 0.05
HDAC6-211ENST00000443563 COL16A1Q07092 1604 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-211ENST00000443563 NUTM2FA1L443 756 aa15.35■□□□□ 0.05
HDAC6-211ENST00000443563 ORAI2Q96SN7 254 aa15.35■□□□□ 0.05
HDAC6-211ENST00000443563 USP32Q8NFA0 1604 aa15.34■□□□□ 0.05
HDAC6-211ENST00000443563 NPHP3Q7Z494 1330 aa15.33■□□□□ 0.04
HDAC6-211ENST00000443563 SLC24A1O60721 1099 aa15.32■□□□□ 0.04
HDAC6-211ENST00000443563 CDK19Q9BWU1 502 aa15.32■□□□□ 0.04
HDAC6-211ENST00000443563 JCADQ9P266 1359 aa15.32■□□□□ 0.04
HDAC6-211ENST00000443563 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
HDAC6-211ENST00000443563 PHF8Q9UPP1 1060 aa15.31■□□□□ 0.04
HDAC6-211ENST00000443563 EVC2Q86UK5 1308 aa15.31■□□□□ 0.04
HDAC6-211ENST00000443563 SBNO2Q9Y2G9 1366 aa15.31■□□□□ 0.04
HDAC6-211ENST00000443563 SHPRHQ149N8 1683 aa15.31■□□□□ 0.04
HDAC6-211ENST00000443563 ATP7BP35670 1465 aa15.29■□□□□ 0.04
HDAC6-211ENST00000443563 SOS2Q07890 1332 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-211ENST00000443563 SRPK2P78362 688 aaKnown RBP15.29■□□□□ 0.04
HDAC6-211ENST00000443563 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
HDAC6-211ENST00000443563 TOPAZ1Q8N9V7 1692 aa15.28■□□□□ 0.04
HDAC6-211ENST00000443563 FOXO3O43524 673 aa15.28■□□□□ 0.04
HDAC6-211ENST00000443563 PRR36Q9H6K5 1346 aa15.27■□□□□ 0.04
HDAC6-211ENST00000443563 PSME1Q06323 249 aa15.27■□□□□ 0.04
HDAC6-211ENST00000443563 DDX17Q92841 729 aaKnown RBP15.27■□□□□ 0.04
HDAC6-211ENST00000443563 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.04
HDAC6-211ENST00000443563 PXDNQ92626 1479 aa15.27■□□□□ 0.03
HDAC6-211ENST00000443563 SPATA31A6Q5VVP1 1343 aa15.26■□□□□ 0.03
HDAC6-211ENST00000443563 PMFBP1Q8TBY8 1022 aa15.26■□□□□ 0.03
HDAC6-211ENST00000443563 USP47Q96K76 1375 aa15.25■□□□□ 0.03
HDAC6-211ENST00000443563 KRT28Q7Z3Y7 464 aa15.25■□□□□ 0.03
HDAC6-211ENST00000443563 MED1Q15648 1581 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-211ENST00000443563 ST20-MTHFSA0A0A6YYL1 179 aa15.24■□□□□ 0.03
HDAC6-211ENST00000443563 NGDNQ8NEJ9 315 aaKnown RBP15.24■□□□□ 0.03
HDAC6-211ENST00000443563 CABP2Q9NPB3 220 aa15.24■□□□□ 0.03
HDAC6-211ENST00000443563 PLEKHG3A1L390 1219 aa15.23■□□□□ 0.03
HDAC6-211ENST00000443563 PPIP5K1Q6PFW1 1433 aa15.23■□□□□ 0.03
HDAC6-211ENST00000443563 ATAD2Q6PL18 1390 aa15.23■□□□□ 0.03
HDAC6-211ENST00000443563 COL22A1Q8NFW1 1626 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-211ENST00000443563 PUS7Q96PZ0 661 aaKnown RBP15.22■□□□□ 0.03
HDAC6-211ENST00000443563 SBNO1A3KN83 1393 aa15.22■□□□□ 0.03
HDAC6-211ENST00000443563 PNPLA6Q8IY17 1366 aa15.22■□□□□ 0.03
HDAC6-211ENST00000443563 XPCQ01831 940 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-211ENST00000443563 POLR3AO14802 1390 aaPredicted RBP15.21■□□□□ 0.02
HDAC6-211ENST00000443563 TRPM3Q9HCF6 1732 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-211ENST00000443563 SPATA31A3Q5VYP0 1347 aa15.2■□□□□ 0.02
HDAC6-211ENST00000443563 TNS3Q68CZ2 1445 aa15.2■□□□□ 0.02
HDAC6-211ENST00000443563 ARHGEF10O15013 1369 aa15.2■□□□□ 0.02
HDAC6-211ENST00000443563 ACEP12821 1306 aa15.19■□□□□ 0.02
HDAC6-211ENST00000443563 EIF4G2P78344 907 aaKnown RBP eCLIP15.19■□□□□ 0.02
HDAC6-211ENST00000443563 TMF1P82094 1093 aa15.19■□□□□ 0.02
HDAC6-211ENST00000443563 TESK2Q96S53 571 aa15.19■□□□□ 0.02
HDAC6-211ENST00000443563 BRD4O60885 1362 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-211ENST00000443563 CDCA8Q53HL2 280 aa15.18■□□□□ 0.02
HDAC6-211ENST00000443563 CABP1Q9NZU7 370 aa15.18■□□□□ 0.02
HDAC6-211ENST00000443563 ALS2Q96Q42 1657 aa15.17■□□□□ 0.02
HDAC6-211ENST00000443563 DISP3Q9P2K9 1392 aa15.17■□□□□ 0.02
HDAC6-211ENST00000443563 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-211ENST00000443563 AKAP12Q02952 1782 aa15.16■□□□□ 0.02
HDAC6-211ENST00000443563 NUTM2BA6NNL0 878 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-211ENST00000443563 NUTM2EB1AL46 878 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-211ENST00000443563 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-211ENST00000443563 MEX3CQ5U5Q3 659 aaKnown RBP15.16■□□□□ 0.02
HDAC6-211ENST00000443563 NUTM2AQ8IVF1 878 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-211ENST00000443563 ZNF692Q9BU19 519 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-211ENST00000443563 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
HDAC6-211ENST00000443563 LMOD2Q6P5Q4 547 aa15.15■□□□□ 0.02
HDAC6-211ENST00000443563 MARF1Q9Y4F3 1742 aaKnown RBP15.14■□□□□ 0.01
HDAC6-211ENST00000443563 LRP6O75581 1613 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms