RNA–Protein interactions for RNA: ENST00000440356.1

AC004854.1-201, humanhuman

BASIC

Gene AC004854.1, Length 349 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004854.1-201ENST00000440356 RSBN1LQ6PCB5 846 aaPredicted RBP11.37□□□□□ -0.59
AC004854.1-201ENST00000440356 RIC3Q7Z5B4 369 aa11.37□□□□□ -0.59
AC004854.1-201ENST00000440356 PCDHGC3Q9UN70 934 aa11.37□□□□□ -0.59
AC004854.1-201ENST00000440356 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
AC004854.1-201ENST00000440356 SPTLC1O15269 473 aa11.35□□□□□ -0.59
AC004854.1-201ENST00000440356 GJA5P36382 358 aa11.35□□□□□ -0.59
AC004854.1-201ENST00000440356 FAM160A2Q8N612 972 aaPredicted RBP11.35□□□□□ -0.59
AC004854.1-201ENST00000440356 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
AC004854.1-201ENST00000440356 MSS51Q4VC12 460 aa11.34□□□□□ -0.59
AC004854.1-201ENST00000440356 RNF223E7ERA6 249 aa11.33□□□□□ -0.6
AC004854.1-201ENST00000440356 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
AC004854.1-201ENST00000440356 PRDM9Q9NQV7 894 aa11.33□□□□□ -0.6
AC004854.1-201ENST00000440356 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
AC004854.1-201ENST00000440356 PPEF1O14829 653 aaPredicted RBP11.32□□□□□ -0.6
AC004854.1-201ENST00000440356 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
AC004854.1-201ENST00000440356 MTMR2Q13614 643 aa11.32□□□□□ -0.6
AC004854.1-201ENST00000440356 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
AC004854.1-201ENST00000440356 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
AC004854.1-201ENST00000440356 ATP1B4Q9UN42 357 aaPredicted RBP11.32□□□□□ -0.6
AC004854.1-201ENST00000440356 RGS20O76081 388 aa11.31□□□□□ -0.6
AC004854.1-201ENST00000440356 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
AC004854.1-201ENST00000440356 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
AC004854.1-201ENST00000440356 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
AC004854.1-201ENST00000440356 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
AC004854.1-201ENST00000440356 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
AC004854.1-201ENST00000440356 ZBTB3Q9H5J0 574 aa11.3□□□□□ -0.6
AC004854.1-201ENST00000440356 SPDYE5A6NIY4 337 aa11.28□□□□□ -0.6
AC004854.1-201ENST00000440356 SKIV2LQ15477 1246 aaKnown RBP11.28□□□□□ -0.6
AC004854.1-201ENST00000440356 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
AC004854.1-201ENST00000440356 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
AC004854.1-201ENST00000440356 HRCP23327 699 aa11.27□□□□□ -0.61
AC004854.1-201ENST00000440356 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.61
AC004854.1-201ENST00000440356 PRPF38BQ5VTL8 546 aaKnown RBP11.27□□□□□ -0.61
AC004854.1-201ENST00000440356 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
AC004854.1-201ENST00000440356 FCF1Q9Y324 198 aaKnown RBP11.27□□□□□ -0.61
AC004854.1-201ENST00000440356 MMP16P51512 607 aa11.26□□□□□ -0.61
AC004854.1-201ENST00000440356 TUSC1Q2TAM9 212 aa11.26□□□□□ -0.61
AC004854.1-201ENST00000440356 PRR7Q8TB68 274 aa11.26□□□□□ -0.61
AC004854.1-201ENST00000440356 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
AC004854.1-201ENST00000440356 PRKD2Q9BZL6 878 aa11.26□□□□□ -0.61
AC004854.1-201ENST00000440356 DXOO77932 396 aaKnown RBP11.25□□□□□ -0.61
AC004854.1-201ENST00000440356 JUNDP17535 347 aa11.25□□□□□ -0.61
AC004854.1-201ENST00000440356 QPCTQ16769 361 aa11.24□□□□□ -0.61
AC004854.1-201ENST00000440356 LILRB3O75022 631 aa11.22□□□□□ -0.61
AC004854.1-201ENST00000440356 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
AC004854.1-201ENST00000440356 TSC1Q92574 1164 aa11.22□□□□□ -0.61
AC004854.1-201ENST00000440356 CFAP99D6REC4 459 aa11.21□□□□□ -0.61
AC004854.1-201ENST00000440356 SLC19A1P41440 591 aa11.21□□□□□ -0.61
AC004854.1-201ENST00000440356 PROCA1Q8NCQ7 364 aaPredicted RBP11.21□□□□□ -0.61
AC004854.1-201ENST00000440356 PCMTD1Q96MG8 357 aaPredicted RBP11.21□□□□□ -0.61
AC004854.1-201ENST00000440356 V9GY48 417 aaPredicted RBP11.21□□□□□ -0.61
AC004854.1-201ENST00000440356 PLA2G2CQ5R387 149 aa11.2□□□□□ -0.62
AC004854.1-201ENST00000440356 GOPCQ9HD26 462 aa11.2□□□□□ -0.62
AC004854.1-201ENST00000440356 DESI1Q6ICB0 168 aa11.19□□□□□ -0.62
AC004854.1-201ENST00000440356 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
AC004854.1-201ENST00000440356 ZBTB24O43167 697 aaPredicted RBP11.18□□□□□ -0.62
AC004854.1-201ENST00000440356 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
AC004854.1-201ENST00000440356 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.18□□□□□ -0.62
AC004854.1-201ENST00000440356 PTPRNQ16849 979 aa11.17□□□□□ -0.62
AC004854.1-201ENST00000440356 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
AC004854.1-201ENST00000440356 HELBQ8NG08 1087 aaPredicted RBP11.17□□□□□ -0.62
AC004854.1-201ENST00000440356 EMID1Q96A84 441 aaPredicted RBP11.16□□□□□ -0.62
AC004854.1-201ENST00000440356 CCNYL3P0C7X3 344 aa11.15□□□□□ -0.62
AC004854.1-201ENST00000440356 RPIAP49247 311 aa11.14□□□□□ -0.63
AC004854.1-201ENST00000440356 SPRYD7Q5W111 196 aa11.14□□□□□ -0.63
AC004854.1-201ENST00000440356 LYPD8Q6UX82 237 aa11.13□□□□□ -0.63
AC004854.1-201ENST00000440356 CD2BP2O95400 341 aaKnown RBP11.12□□□□□ -0.63
AC004854.1-201ENST00000440356 PPP2R2DQ66LE6 453 aa11.12□□□□□ -0.63
AC004854.1-201ENST00000440356 CTHP32929 405 aa11.11□□□□□ -0.63
AC004854.1-201ENST00000440356 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
AC004854.1-201ENST00000440356 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
AC004854.1-201ENST00000440356 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
AC004854.1-201ENST00000440356 EVA1BQ9NVM1 165 aa11.1□□□□□ -0.63
AC004854.1-201ENST00000440356 PER1O15534 1290 aaPredicted RBP11.09□□□□□ -0.63
AC004854.1-201ENST00000440356 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
AC004854.1-201ENST00000440356 TRIM32Q13049 653 aa11.09□□□□□ -0.63
AC004854.1-201ENST00000440356 AP1G2O75843 785 aa11.08□□□□□ -0.64
AC004854.1-201ENST00000440356 RFC5P40937 340 aa11.08□□□□□ -0.64
AC004854.1-201ENST00000440356 IRX2Q9BZI1 471 aaPredicted RBP11.08□□□□□ -0.64
AC004854.1-201ENST00000440356 CTDSPL2Q05D32 466 aa11.07□□□□□ -0.64
AC004854.1-201ENST00000440356 PTCRAQ6ISU1 281 aaPredicted RBP11.07□□□□□ -0.64
AC004854.1-201ENST00000440356 UNC93B1Q9H1C4 597 aa11.07□□□□□ -0.64
AC004854.1-201ENST00000440356 MAP10Q9P2G4 905 aa11.05□□□□□ -0.64
AC004854.1-201ENST00000440356 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
AC004854.1-201ENST00000440356 FOXC1Q12948 553 aa11.03□□□□□ -0.64
AC004854.1-201ENST00000440356 PDZRN3Q9UPQ7 1066 aa11.03□□□□□ -0.64
AC004854.1-201ENST00000440356 GFRA3O60609 400 aa11.02□□□□□ -0.65
AC004854.1-201ENST00000440356 TMEM259Q4ZIN3 620 aa11.02□□□□□ -0.65
AC004854.1-201ENST00000440356 LRRN4Q8WUT4 740 aa11.02□□□□□ -0.65
AC004854.1-201ENST00000440356 TNFRSF10AO00220 468 aa11.01□□□□□ -0.65
AC004854.1-201ENST00000440356 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
AC004854.1-201ENST00000440356 WNT7BP56706 349 aa11□□□□□ -0.65
AC004854.1-201ENST00000440356 LINC01559Q495D7 138 aa11□□□□□ -0.65
AC004854.1-201ENST00000440356 BAP1Q92560 729 aa11□□□□□ -0.65
AC004854.1-201ENST00000440356 LAPTM4AQ15012 233 aa10.99□□□□□ -0.65
AC004854.1-201ENST00000440356 GDF9O60383 454 aa10.98□□□□□ -0.65
AC004854.1-201ENST00000440356 SKOR1P84550 965 aa10.98□□□□□ -0.65
AC004854.1-201ENST00000440356 TRIM67Q6ZTA4 783 aa10.98□□□□□ -0.65
AC004854.1-201ENST00000440356 ARMC2Q8NEN0 867 aa10.98□□□□□ -0.65
AC004854.1-201ENST00000440356 PKD2L1Q9P0L9 805 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms