RNA–Protein interactions for RNA: ENST00000440186.5

PTPN12-207, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 1 (best)

Gene PTPN12, Length 159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-207ENST00000440186 NKX2-3Q8TAU0 364 aa5.96□□□□□ -1.46
PTPN12-207ENST00000440186 POLR3EQ9NVU0 708 aa5.96□□□□□ -1.46
PTPN12-207ENST00000440186 SALL2Q9Y467 1007 aaPredicted RBP5.96□□□□□ -1.46
PTPN12-207ENST00000440186 SKIV2LQ15477 1246 aaKnown RBP5.95□□□□□ -1.46
PTPN12-207ENST00000440186 SPSB2Q99619 263 aa5.95□□□□□ -1.46
PTPN12-207ENST00000440186 CSPP1Q1MSJ5 1256 aa5.94□□□□□ -1.46
PTPN12-207ENST00000440186 TUSC1Q2TAM9 212 aa5.94□□□□□ -1.46
PTPN12-207ENST00000440186 SYMPKQ92797 1274 aaKnown RBP5.94□□□□□ -1.46
PTPN12-207ENST00000440186 GOPCQ9HD26 462 aa5.94□□□□□ -1.46
PTPN12-207ENST00000440186 PCDHB15Q9Y5E8 787 aa5.94□□□□□ -1.46
PTPN12-207ENST00000440186 A0A0G2JS52 829 aa5.93□□□□□ -1.46
PTPN12-207ENST00000440186 C6orf229H3BNL8 230 aa5.93□□□□□ -1.46
PTPN12-207ENST00000440186 MTMR2Q13614 643 aa5.93□□□□□ -1.46
PTPN12-207ENST00000440186 MSS51Q4VC12 460 aa5.93□□□□□ -1.46
PTPN12-207ENST00000440186 PRPF38BQ5VTL8 546 aaKnown RBP5.93□□□□□ -1.46
PTPN12-207ENST00000440186 CABLES1Q8TDN4 633 aa5.93□□□□□ -1.46
PTPN12-207ENST00000440186 USB1Q9BQ65 265 aaKnown RBP5.93□□□□□ -1.46
PTPN12-207ENST00000440186 ZBTB3Q9H5J0 574 aa5.93□□□□□ -1.46
PTPN12-207ENST00000440186 PRDM9Q9NQV7 894 aa5.93□□□□□ -1.46
PTPN12-207ENST00000440186 S1PR4O95977 384 aa5.92□□□□□ -1.46
PTPN12-207ENST00000440186 HRCP23327 699 aa5.92□□□□□ -1.46
PTPN12-207ENST00000440186 QPCTQ16769 361 aa5.92□□□□□ -1.46
PTPN12-207ENST00000440186 RETREG3Q86VR2 466 aa5.92□□□□□ -1.46
PTPN12-207ENST00000440186 FAM160A2Q8N612 972 aaPredicted RBP5.92□□□□□ -1.46
PTPN12-207ENST00000440186 PROCA1Q8NCQ7 364 aaPredicted RBP5.92□□□□□ -1.46
PTPN12-207ENST00000440186 PCMTD1Q96MG8 357 aaPredicted RBP5.92□□□□□ -1.46
PTPN12-207ENST00000440186 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.92□□□□□ -1.46
PTPN12-207ENST00000440186 SLC6A16Q9GZN6 736 aa5.92□□□□□ -1.46
PTPN12-207ENST00000440186 SPDYE5A6NIY4 337 aa5.91□□□□□ -1.46
PTPN12-207ENST00000440186 LILRB3O75022 631 aa5.91□□□□□ -1.46
PTPN12-207ENST00000440186 PPP1R18Q6NYC8 613 aa5.9□□□□□ -1.46
PTPN12-207ENST00000440186 PRR7Q8TB68 274 aa5.9□□□□□ -1.46
PTPN12-207ENST00000440186 ATP1B4Q9UN42 357 aaPredicted RBP5.9□□□□□ -1.46
PTPN12-207ENST00000440186 NUTM2BA6NNL0 878 aaPredicted RBP5.89□□□□□ -1.47
PTPN12-207ENST00000440186 NUTM2EB1AL46 878 aaPredicted RBP5.89□□□□□ -1.47
PTPN12-207ENST00000440186 CFAP99D6REC4 459 aa5.89□□□□□ -1.47
PTPN12-207ENST00000440186 DXOO77932 396 aaKnown RBP5.89□□□□□ -1.47
PTPN12-207ENST00000440186 JUNDP17535 347 aa5.89□□□□□ -1.47
PTPN12-207ENST00000440186 GGCXP38435 758 aa5.89□□□□□ -1.47
PTPN12-207ENST00000440186 MMP16P51512 607 aa5.89□□□□□ -1.47
PTPN12-207ENST00000440186 RTL5Q5HYW3 569 aaPredicted RBP5.89□□□□□ -1.47
PTPN12-207ENST00000440186 NUTM2DQ5VT03 806 aaPredicted RBP5.89□□□□□ -1.47
PTPN12-207ENST00000440186 FBXO31Q5XUX0 539 aaPredicted RBP5.89□□□□□ -1.47
PTPN12-207ENST00000440186 NUTM2AQ8IVF1 878 aaPredicted RBP5.89□□□□□ -1.47
PTPN12-207ENST00000440186 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.89□□□□□ -1.47
PTPN12-207ENST00000440186 RNF223E7ERA6 249 aa5.88□□□□□ -1.47
PTPN12-207ENST00000440186 PPP2R2DQ66LE6 453 aa5.88□□□□□ -1.47
PTPN12-207ENST00000440186 PPEF1O14829 653 aaPredicted RBP5.87□□□□□ -1.47
PTPN12-207ENST00000440186 TMEM132AQ24JP5 1023 aa5.87□□□□□ -1.47
PTPN12-207ENST00000440186 ANKLE1Q8NAG6 615 aa5.87□□□□□ -1.47
PTPN12-207ENST00000440186 FCF1Q9Y324 198 aaKnown RBP5.87□□□□□ -1.47
PTPN12-207ENST00000440186 RFC5P40937 340 aa5.86□□□□□ -1.47
PTPN12-207ENST00000440186 DESI1Q6ICB0 168 aa5.86□□□□□ -1.47
PTPN12-207ENST00000440186 HELBQ8NG08 1087 aaPredicted RBP5.86□□□□□ -1.47
PTPN12-207ENST00000440186 PTPRNQ16849 979 aa5.85□□□□□ -1.47
PTPN12-207ENST00000440186 TSC1Q92574 1164 aa5.85□□□□□ -1.47
PTPN12-207ENST00000440186 PLA2G2CQ5R387 149 aa5.84□□□□□ -1.47
PTPN12-207ENST00000440186 LYPD8Q6UX82 237 aa5.84□□□□□ -1.47
PTPN12-207ENST00000440186 NUDT12Q9BQG2 462 aa5.84□□□□□ -1.47
PTPN12-207ENST00000440186 PER1O15534 1290 aaPredicted RBP5.83□□□□□ -1.48
PTPN12-207ENST00000440186 AP1G2O75843 785 aa5.83□□□□□ -1.48
PTPN12-207ENST00000440186 CCNYL3P0C7X3 344 aa5.83□□□□□ -1.48
PTPN12-207ENST00000440186 USP17L8P0C7I0 530 aa5.82□□□□□ -1.48
PTPN12-207ENST00000440186 CCDC24Q8N4L8 307 aa5.82□□□□□ -1.48
PTPN12-207ENST00000440186 EMID1Q96A84 441 aaPredicted RBP5.82□□□□□ -1.48
PTPN12-207ENST00000440186 RGS20O76081 388 aa5.81□□□□□ -1.48
PTPN12-207ENST00000440186 F12P00748 615 aaPredicted RBP5.81□□□□□ -1.48
PTPN12-207ENST00000440186 CTDSPL2Q05D32 466 aa5.81□□□□□ -1.48
PTPN12-207ENST00000440186 TMEM259Q4ZIN3 620 aa5.81□□□□□ -1.48
PTPN12-207ENST00000440186 MAP10Q9P2G4 905 aa5.81□□□□□ -1.48
PTPN12-207ENST00000440186 LIAT1Q6ZQX7 453 aa5.8□□□□□ -1.48
PTPN12-207ENST00000440186 LRRN4Q8WUT4 740 aa5.8□□□□□ -1.48
PTPN12-207ENST00000440186 PRKD2Q9BZL6 878 aa5.8□□□□□ -1.48
PTPN12-207ENST00000440186 CTHP32929 405 aa5.79□□□□□ -1.48
PTPN12-207ENST00000440186 SLC19A1P41440 591 aa5.79□□□□□ -1.48
PTPN12-207ENST00000440186 RPIAP49247 311 aa5.79□□□□□ -1.48
PTPN12-207ENST00000440186 KCNH2Q12809 1159 aa5.79□□□□□ -1.48
PTPN12-207ENST00000440186 EVA1BQ9NVM1 165 aa5.79□□□□□ -1.48
PTPN12-207ENST00000440186 V9GY48 417 aaPredicted RBP5.79□□□□□ -1.48
PTPN12-207ENST00000440186 ZBTB24O43167 697 aaPredicted RBP5.78□□□□□ -1.48
PTPN12-207ENST00000440186 TRIM32Q13049 653 aa5.78□□□□□ -1.48
PTPN12-207ENST00000440186 PTCRAQ6ISU1 281 aaPredicted RBP5.78□□□□□ -1.48
PTPN12-207ENST00000440186 BANK1Q8NDB2 785 aa5.78□□□□□ -1.48
PTPN12-207ENST00000440186 UNC93B1Q9H1C4 597 aa5.78□□□□□ -1.48
PTPN12-207ENST00000440186 HMX1Q9NP08 348 aaPredicted RBP5.78□□□□□ -1.48
PTPN12-207ENST00000440186 NR6A1Q15406 480 aa5.76□□□□□ -1.49
PTPN12-207ENST00000440186 SPRYD7Q5W111 196 aa5.76□□□□□ -1.49
PTPN12-207ENST00000440186 SNRKQ9NRH2 765 aa5.76□□□□□ -1.49
PTPN12-207ENST00000440186 SOCS7O14512 581 aa5.75□□□□□ -1.49
PTPN12-207ENST00000440186 MCM6Q14566 821 aa5.75□□□□□ -1.49
PTPN12-207ENST00000440186 LINC01559Q495D7 138 aa5.75□□□□□ -1.49
PTPN12-207ENST00000440186 ZNF697Q5TEC3 545 aa5.75□□□□□ -1.49
PTPN12-207ENST00000440186 MTMR14Q8NCE2 650 aa5.75□□□□□ -1.49
PTPN12-207ENST00000440186 EPS8L1Q8TE68 723 aa5.75□□□□□ -1.49
PTPN12-207ENST00000440186 TRIM34Q9BYJ4 488 aa5.75□□□□□ -1.49
PTPN12-207ENST00000440186 CD2BP2O95400 341 aaKnown RBP5.74□□□□□ -1.49
PTPN12-207ENST00000440186 WNT7BP56706 349 aa5.74□□□□□ -1.49
PTPN12-207ENST00000440186 ZNF598Q86UK7 904 aaKnown RBP5.74□□□□□ -1.49
PTPN12-207ENST00000440186 GJD4Q96KN9 370 aaPredicted RBP5.74□□□□□ -1.49
PTPN12-207ENST00000440186 SKOR1P84550 965 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms