RNA–Protein interactions for RNA: ENST00000438684.1

MSL3P1-201, Transcript of MSL complex subunit 3 pseudogene 1, humanhuman

TSL 2 BASIC

Gene MSL3P1, Length 2,032 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1-201ENST00000438684 FRAT1Q92837 279 aaPredicted RBP11.3□□□□□ -0.6
MSL3P1-201ENST00000438684 COG6Q9Y2V7 657 aa11.3□□□□□ -0.6
MSL3P1-201ENST00000438684 NSD3Q9BZ95 1437 aa11.3□□□□□ -0.6
MSL3P1-201ENST00000438684 LMTK2Q8IWU2 1503 aa11.3□□□□□ -0.6
MSL3P1-201ENST00000438684 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
MSL3P1-201ENST00000438684 MYH16Q9H6N6 1097 aa11.3□□□□□ -0.6
MSL3P1-201ENST00000438684 MROH1Q8NDA8 1641 aa11.29□□□□□ -0.6
MSL3P1-201ENST00000438684 CCDC27Q2M243 656 aa11.29□□□□□ -0.6
MSL3P1-201ENST00000438684 PANK1Q8TE04 598 aa11.29□□□□□ -0.6
MSL3P1-201ENST00000438684 RWDD1Q9H446 243 aaPredicted RBP11.29□□□□□ -0.6
MSL3P1-201ENST00000438684 RPGRIP1LQ68CZ1 1315 aa11.29□□□□□ -0.6
MSL3P1-201ENST00000438684 UGGT1Q9NYU2 1555 aa11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 USP32Q8NFA0 1604 aa11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 CHGAP10645 457 aaKnown RBP11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 RARSP54136 660 aaKnown RBP11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 PUS7Q96PZ0 661 aaKnown RBP11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 NOS1P29475 1434 aa11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 MROH2AA6NES4 1674 aa11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 QRICH2Q9H0J4 1663 aa11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 NEUROD2Q15784 382 aa11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 TCP11L2Q8N4U5 519 aa11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 ADGRB3O60242 1522 aa11.28□□□□□ -0.6
MSL3P1-201ENST00000438684 SHPRHQ149N8 1683 aa11.27□□□□□ -0.6
MSL3P1-201ENST00000438684 C14orf93Q9H972 538 aaKnown RBP11.27□□□□□ -0.61
MSL3P1-201ENST00000438684 DMRT2Q9Y5R5 561 aa11.27□□□□□ -0.61
MSL3P1-201ENST00000438684 NSD2O96028 1365 aa11.27□□□□□ -0.61
MSL3P1-201ENST00000438684 PPRC1Q5VV67 1664 aaKnown RBP11.27□□□□□ -0.61
MSL3P1-201ENST00000438684 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
MSL3P1-201ENST00000438684 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
MSL3P1-201ENST00000438684 ZC3H13Q5T200 1668 aaKnown RBP11.26□□□□□ -0.61
MSL3P1-201ENST00000438684 CT47B1P0C2W7 299 aaPredicted RBP11.26□□□□□ -0.61
MSL3P1-201ENST00000438684 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
MSL3P1-201ENST00000438684 IQSEC2Q5JU85 1478 aa11.26□□□□□ -0.61
MSL3P1-201ENST00000438684 ZNF518AQ6AHZ1 1483 aa11.26□□□□□ -0.61
MSL3P1-201ENST00000438684 PHF23Q9BUL5 403 aaPredicted RBP11.25□□□□□ -0.61
MSL3P1-201ENST00000438684 SLC12A5Q9H2X9 1139 aa11.25□□□□□ -0.61
MSL3P1-201ENST00000438684 EVC2Q86UK5 1308 aa11.25□□□□□ -0.61
MSL3P1-201ENST00000438684 PPLO60437 1756 aa11.25□□□□□ -0.61
MSL3P1-201ENST00000438684 MTHFSP49914 203 aa11.25□□□□□ -0.61
MSL3P1-201ENST00000438684 RRP7AQ9Y3A4 280 aaKnown RBP11.25□□□□□ -0.61
MSL3P1-201ENST00000438684 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
MSL3P1-201ENST00000438684 KIDINS220Q9ULH0 1771 aa11.24□□□□□ -0.61
MSL3P1-201ENST00000438684 USP19O94966 1318 aa11.23□□□□□ -0.61
MSL3P1-201ENST00000438684 FTSJ3Q8IY81 847 aaKnown RBP11.23□□□□□ -0.61
MSL3P1-201ENST00000438684 ZKSCAN2Q63HK3 967 aa11.23□□□□□ -0.61
MSL3P1-201ENST00000438684 CFAP74Q9C0B2 1584 aa11.22□□□□□ -0.61
MSL3P1-201ENST00000438684 ANKRD36BQ8N2N9 1353 aa11.22□□□□□ -0.61
MSL3P1-201ENST00000438684 U2AF1L5P0DN76 240 aaPredicted RBP11.22□□□□□ -0.61
MSL3P1-201ENST00000438684 U2AF1Q01081 240 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSL3P1-201ENST00000438684 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
MSL3P1-201ENST00000438684 VGFO15240 615 aaPredicted RBP11.21□□□□□ -0.61
MSL3P1-201ENST00000438684 MVPQ14764 893 aaKnown RBP11.21□□□□□ -0.61
MSL3P1-201ENST00000438684 PDZRN3Q9UPQ7 1066 aa11.21□□□□□ -0.61
MSL3P1-201ENST00000438684 ADGRB1O14514 1584 aa11.21□□□□□ -0.61
MSL3P1-201ENST00000438684 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.62
MSL3P1-201ENST00000438684 L1TD1Q5T7N2 865 aaKnown RBP11.21□□□□□ -0.62
MSL3P1-201ENST00000438684 DZIP1LQ8IYY4 767 aaKnown RBP11.21□□□□□ -0.62
MSL3P1-201ENST00000438684 PNNQ9H307 717 aaKnown RBP11.21□□□□□ -0.62
MSL3P1-201ENST00000438684 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.62
MSL3P1-201ENST00000438684 ASXL2Q76L83 1435 aa11.21□□□□□ -0.62
MSL3P1-201ENST00000438684 SEC24BO95487 1268 aa11.2□□□□□ -0.62
MSL3P1-201ENST00000438684 TBC1D32Q96NH3 1257 aa11.2□□□□□ -0.62
MSL3P1-201ENST00000438684 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSL3P1-201ENST00000438684 NPATQ14207 1427 aa11.19□□□□□ -0.62
MSL3P1-201ENST00000438684 KIF13AQ9H1H9 1805 aa11.19□□□□□ -0.62
MSL3P1-201ENST00000438684 RLBP1P12271 317 aa11.19□□□□□ -0.62
MSL3P1-201ENST00000438684 TMEM132EQ6IEE7 984 aa11.19□□□□□ -0.62
MSL3P1-201ENST00000438684 GGT6Q6P531 493 aa11.19□□□□□ -0.62
MSL3P1-201ENST00000438684 BCL2L13Q9BXK5 485 aa11.19□□□□□ -0.62
MSL3P1-201ENST00000438684 GLI2P10070 1586 aa11.18□□□□□ -0.62
MSL3P1-201ENST00000438684 SLKQ9H2G2 1235 aaPredicted RBP11.18□□□□□ -0.62
MSL3P1-201ENST00000438684 DDX19BQ9UMR2 479 aa11.18□□□□□ -0.62
MSL3P1-201ENST00000438684 SMC4Q9NTJ3 1288 aa11.18□□□□□ -0.62
MSL3P1-201ENST00000438684 NLRP1Q9C000 1473 aa11.17□□□□□ -0.62
MSL3P1-201ENST00000438684 MLH3Q9UHC1 1453 aa11.17□□□□□ -0.62
MSL3P1-201ENST00000438684 ADGRB2O60241 1585 aa11.17□□□□□ -0.62
MSL3P1-201ENST00000438684 ABCC11Q96J66 1382 aa11.17□□□□□ -0.62
MSL3P1-201ENST00000438684 IL16Q14005 1332 aa11.17□□□□□ -0.62
MSL3P1-201ENST00000438684 IPO8O15397 1037 aaKnown RBP11.16□□□□□ -0.62
MSL3P1-201ENST00000438684 HDAC1Q13547 482 aaPredicted RBP11.16□□□□□ -0.62
MSL3P1-201ENST00000438684 FAM43AQ8N2R8 423 aa11.16□□□□□ -0.62
MSL3P1-201ENST00000438684 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
MSL3P1-201ENST00000438684 ARHGEF28Q8N1W1 1705 aaKnown RBP11.16□□□□□ -0.62
MSL3P1-201ENST00000438684 TERF2IPQ9NYB0 399 aa11.16□□□□□ -0.62
MSL3P1-201ENST00000438684 POGZQ7Z3K3 1410 aa11.15□□□□□ -0.62
MSL3P1-201ENST00000438684 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
MSL3P1-201ENST00000438684 U2SURPO15042 1029 aaKnown RBP11.15□□□□□ -0.62
MSL3P1-201ENST00000438684 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
MSL3P1-201ENST00000438684 CHMP4BQ9H444 224 aaKnown RBP11.15□□□□□ -0.62
MSL3P1-201ENST00000438684 ANTXR1Q9H6X2 564 aa11.15□□□□□ -0.62
MSL3P1-201ENST00000438684 CAMSAP1Q5T5Y3 1602 aa11.15□□□□□ -0.62
MSL3P1-201ENST00000438684 ABCC3O15438 1527 aa11.15□□□□□ -0.62
MSL3P1-201ENST00000438684 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
MSL3P1-201ENST00000438684 C22orf23Q9BZE7 217 aa11.14□□□□□ -0.63
MSL3P1-201ENST00000438684 TNNQ9UQP3 1299 aa11.14□□□□□ -0.63
MSL3P1-201ENST00000438684 TULP4Q9NRJ4 1543 aa11.14□□□□□ -0.63
MSL3P1-201ENST00000438684 KIF16BQ96L93 1317 aa11.14□□□□□ -0.63
MSL3P1-201ENST00000438684 SRPK2P78362 688 aaKnown RBP11.14□□□□□ -0.63
MSL3P1-201ENST00000438684 EXOSC9Q06265 439 aaKnown RBP11.14□□□□□ -0.63
MSL3P1-201ENST00000438684 ATF7IPQ6VMQ6 1270 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms