RNA–Protein interactions for RNA: ENST00000437941.6

SSX2IP-203, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2 BASIC

Gene SSX2IP, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-203ENST00000437941 UBTFL1P0CB47 393 aaPredicted RBP26.98■■□□□ 1.91
SSX2IP-203ENST00000437941 MRC2Q9UBG0 1479 aa26.98■■□□□ 1.91
SSX2IP-203ENST00000437941 SF3B2Q13435 895 aaKnown RBP26.97■■□□□ 1.91
SSX2IP-203ENST00000437941 SMG6Q86US8 1419 aaKnown RBP26.97■■□□□ 1.91
SSX2IP-203ENST00000437941 RBM42Q9BTD8 480 aaKnown RBP26.96■■□□□ 1.91
SSX2IP-203ENST00000437941 CCDC27Q2M243 656 aa26.96■■□□□ 1.91
SSX2IP-203ENST00000437941 CCDC43Q96MW1 224 aaKnown RBP26.96■■□□□ 1.91
SSX2IP-203ENST00000437941 LRRC9Q6ZRR7 1453 aa26.95■■□□□ 1.91
SSX2IP-203ENST00000437941 PRAM1Q96QH2 718 aa26.95■■□□□ 1.91
SSX2IP-203ENST00000437941 TATP17735 454 aaPredicted RBP26.95■■□□□ 1.9
SSX2IP-203ENST00000437941 FOXD4L6Q3SYB3 417 aaPredicted RBP26.95■■□□□ 1.9
SSX2IP-203ENST00000437941 FOXD4L3Q6VB84 417 aaPredicted RBP26.95■■□□□ 1.9
SSX2IP-203ENST00000437941 KIF6Q6ZMV9 814 aa26.95■■□□□ 1.9
SSX2IP-203ENST00000437941 WASHC4Q2M389 1173 aa26.95■■□□□ 1.9
SSX2IP-203ENST00000437941 IFT140Q96RY7 1462 aa26.94■■□□□ 1.9
SSX2IP-203ENST00000437941 MTHFSP49914 203 aa26.94■■□□□ 1.9
SSX2IP-203ENST00000437941 GOLGA6L1Q8N7Z2 621 aa26.94■■□□□ 1.9
SSX2IP-203ENST00000437941 CCDC30Q5VVM6 783 aa26.93■■□□□ 1.9
SSX2IP-203ENST00000437941 SAMD1Q6SPF0 538 aaPredicted RBP26.93■■□□□ 1.9
SSX2IP-203ENST00000437941 RALYLQ86SE5 291 aaKnown RBP26.93■■□□□ 1.9
SSX2IP-203ENST00000437941 KIF7Q2M1P5 1343 aa26.93■■□□□ 1.9
SSX2IP-203ENST00000437941 ANKLE2Q86XL3 938 aa26.93■■□□□ 1.9
SSX2IP-203ENST00000437941 DDX49Q9Y6V7 483 aaKnown RBP26.93■■□□□ 1.9
SSX2IP-203ENST00000437941 PDE4AP27815 886 aa26.92■■□□□ 1.9
SSX2IP-203ENST00000437941 WWC1Q8IX03 1113 aa26.92■■□□□ 1.9
SSX2IP-203ENST00000437941 CCDC7Q96M83 1385 aa26.92■■□□□ 1.9
SSX2IP-203ENST00000437941 PLEKHH2Q8IVE3 1493 aa26.92■■□□□ 1.9
SSX2IP-203ENST00000437941 INTS3Q68E01 1043 aaKnown RBP26.91■■□□□ 1.9
SSX2IP-203ENST00000437941 SLC52A1Q9NWF4 448 aa26.91■■□□□ 1.9
SSX2IP-203ENST00000437941 POGZQ7Z3K3 1410 aa26.9■■□□□ 1.9
SSX2IP-203ENST00000437941 FYB1O15117 783 aa26.9■■□□□ 1.9
SSX2IP-203ENST00000437941 HOOK1Q9UJC3 728 aaKnown RBP26.9■■□□□ 1.9
SSX2IP-203ENST00000437941 SAFBQ15424 915 aaKnown RBP eCLIP26.9■■□□□ 1.9
SSX2IP-203ENST00000437941 FAM177BA6PVY3 158 aa26.89■■□□□ 1.9
SSX2IP-203ENST00000437941 ANKRD20A12PQ8NF67 263 aa26.89■■□□□ 1.9
SSX2IP-203ENST00000437941 NUTM2BA6NNL0 878 aaPredicted RBP26.89■■□□□ 1.89
SSX2IP-203ENST00000437941 NUTM2EB1AL46 878 aaPredicted RBP26.89■■□□□ 1.89
SSX2IP-203ENST00000437941 NUTM2AQ8IVF1 878 aaPredicted RBP26.89■■□□□ 1.89
SSX2IP-203ENST00000437941 SKOR2Q2VWA4 1001 aaPredicted RBP26.89■■□□□ 1.89
SSX2IP-203ENST00000437941 ZNF692Q9BU19 519 aaPredicted RBP26.89■■□□□ 1.89
SSX2IP-203ENST00000437941 SCAPERQ9BY12 1400 aa26.88■■□□□ 1.89
SSX2IP-203ENST00000437941 TOM1L2Q6ZVM7 507 aa26.87■■□□□ 1.89
SSX2IP-203ENST00000437941 PCMTD1Q96MG8 357 aaPredicted RBP26.87■■□□□ 1.89
SSX2IP-203ENST00000437941 GNAI3P08754 354 aa26.86■■□□□ 1.89
SSX2IP-203ENST00000437941 TBC1D2BQ9UPU7 963 aa26.86■■□□□ 1.89
SSX2IP-203ENST00000437941 AAMPQ13685 434 aa26.86■■□□□ 1.89
SSX2IP-203ENST00000437941 HFM1A2PYH4 1435 aa26.85■■□□□ 1.89
SSX2IP-203ENST00000437941 PRKAR2BP31323 418 aa26.84■■□□□ 1.89
SSX2IP-203ENST00000437941 ANO8Q9HCE9 1232 aaPredicted RBP26.84■■□□□ 1.89
SSX2IP-203ENST00000437941 LNPKQ9C0E8 428 aa26.83■■□□□ 1.89
SSX2IP-203ENST00000437941 CLASRPQ8N2M8 674 aaKnown RBP26.83■■□□□ 1.89
SSX2IP-203ENST00000437941 CDK19Q9BWU1 502 aa26.83■■□□□ 1.89
SSX2IP-203ENST00000437941 SMC3Q9UQE7 1217 aa26.83■■□□□ 1.89
SSX2IP-203ENST00000437941 BICD2Q8TD16 824 aa26.82■■□□□ 1.88
SSX2IP-203ENST00000437941 KIF21BO75037 1637 aa26.82■■□□□ 1.88
SSX2IP-203ENST00000437941 IPO7O95373 1038 aaKnown RBP26.82■■□□□ 1.88
SSX2IP-203ENST00000437941 CNKSR2Q8WXI2 1034 aa26.82■■□□□ 1.88
SSX2IP-203ENST00000437941 CABP4P57796 275 aa26.81■■□□□ 1.88
SSX2IP-203ENST00000437941 NINLQ9Y2I6 1382 aa26.81■■□□□ 1.88
SSX2IP-203ENST00000437941 TCP11L2Q8N4U5 519 aa26.81■■□□□ 1.88
SSX2IP-203ENST00000437941 SPG7Q9UQ90 795 aa26.8■■□□□ 1.88
SSX2IP-203ENST00000437941 VPS37CA5D8V6 355 aaPredicted RBP26.8■■□□□ 1.88
SSX2IP-203ENST00000437941 RAPGEF3O95398 923 aa26.8■■□□□ 1.88
SSX2IP-203ENST00000437941 BRMS1Q9HCU9 246 aa26.8■■□□□ 1.88
SSX2IP-203ENST00000437941 PPP1R1BQ9UD71 204 aaPredicted RBP26.79■■□□□ 1.88
SSX2IP-203ENST00000437941 IKQ13123 557 aaPredicted RBP26.79■■□□□ 1.88
SSX2IP-203ENST00000437941 C9orf84Q5VXU9 1444 aa26.79■■□□□ 1.88
SSX2IP-203ENST00000437941 DDX54Q8TDD1 881 aaKnown RBP26.79■■□□□ 1.88
SSX2IP-203ENST00000437941 CNTLNQ9NXG0 1405 aa26.79■■□□□ 1.88
SSX2IP-203ENST00000437941 FSD1Q9BTV5 496 aa26.79■■□□□ 1.88
SSX2IP-203ENST00000437941 CNTROBQ8N137 903 aa26.78■■□□□ 1.88
SSX2IP-203ENST00000437941 CFTRP13569 1480 aa26.78■■□□□ 1.88
SSX2IP-203ENST00000437941 XBP1P17861 261 aa26.78■■□□□ 1.88
SSX2IP-203ENST00000437941 SURF6O75683 361 aaKnown RBP26.77■■□□□ 1.88
SSX2IP-203ENST00000437941 PNISRQ8TF01 805 aaKnown RBP26.77■■□□□ 1.88
SSX2IP-203ENST00000437941 SLC26A8Q96RN1 970 aa26.77■■□□□ 1.88
SSX2IP-203ENST00000437941 PRDM11Q9NQV5 511 aa26.77■■□□□ 1.88
SSX2IP-203ENST00000437941 NESP48681 1621 aa26.77■■□□□ 1.88
SSX2IP-203ENST00000437941 CABP1Q9NZU7 370 aa26.77■■□□□ 1.88
SSX2IP-203ENST00000437941 SART3Q15020 963 aaKnown RBP26.77■■□□□ 1.88
SSX2IP-203ENST00000437941 ADAMTS8Q9UP79 889 aa26.77■■□□□ 1.88
SSX2IP-203ENST00000437941 BRD4O60885 1362 aaPredicted RBP26.75■■□□□ 1.87
SSX2IP-203ENST00000437941 GNL3LQ9NVN8 582 aaKnown RBP26.75■■□□□ 1.87
SSX2IP-203ENST00000437941 CNNM1Q9NRU3 951 aa26.75■■□□□ 1.87
SSX2IP-203ENST00000437941 ZNF530Q6P9A1 599 aaPredicted RBP26.75■■□□□ 1.87
SSX2IP-203ENST00000437941 CCDC70Q6NSX1 233 aa26.74■■□□□ 1.87
SSX2IP-203ENST00000437941 PANK1Q8TE04 598 aa26.74■■□□□ 1.87
SSX2IP-203ENST00000437941 PSMA5P28066 241 aa26.74■■□□□ 1.87
SSX2IP-203ENST00000437941 PIP4K2BP78356 416 aa26.74■■□□□ 1.87
SSX2IP-203ENST00000437941 TSHZ2Q9NRE2 1034 aa26.74■■□□□ 1.87
SSX2IP-203ENST00000437941 RTEL1-TNFRSF6BF6WH68 1400 aa26.74■■□□□ 1.87
SSX2IP-203ENST00000437941 SLC3A2P08195 630 aaKnown RBP26.74■■□□□ 1.87
SSX2IP-203ENST00000437941 SLC4A3P48751 1232 aa26.74■■□□□ 1.87
SSX2IP-203ENST00000437941 SULT6B1Q6IMI4 303 aa26.73■■□□□ 1.87
SSX2IP-203ENST00000437941 PPP2R1AP30153 589 aa26.73■■□□□ 1.87
SSX2IP-203ENST00000437941 MTMR7Q9Y216 660 aa26.73■■□□□ 1.87
SSX2IP-203ENST00000437941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.73■■□□□ 1.87
SSX2IP-203ENST00000437941 TWISTNBQ3B726 338 aaPredicted RBP26.73■■□□□ 1.87
SSX2IP-203ENST00000437941 R3HCC1Q9Y3T6 440 aaKnown RBP26.73■■□□□ 1.87
SSX2IP-203ENST00000437941 ERC1Q8IUD2 1116 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 547.2 ms